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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5778 cluster # 5778       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5778#0 length = 1036 sequences # 3  

consensusID : consensus_5778#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1036
fasta sequence
                              [AGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGGTCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGTGAGTACCCCCAATCGATCCACAGGCAAATCTATCTCTTGCGGAGTTCAGTTGCTCTCTGAATTGTGGATTGTAAAGCAAAGTAAGATCTTTTCGTTTGTGTGCCTATTCGCATGTCTTGGGGGTGATATCAGGGAAAATTAGAATGTTGGGAAAGTTTTGACCTCTCGGCATAAAAACCGTGTTTTGGTAATCTATATAGCGTAGTCCCACTTTGTGGAAGAAATCGAGTTTTCGTAATCAACATGCTAGAGTGCAGGCTACGCTGAAGAAATATGGTTTGAGCATGCAGGATGGCAACATGAACATGCCATTGAGACCCAGTCATTTAGGAAAAACATATTAACCACTTGTGCCAACTTGCTAATAATTGTCTAGTTGGGCCTGACTAAAATTAATTTTCTAATTGTGTGAGACCGTGGGAGAATCGGTAGTTCACAAATTTTAATCATACTTATACTTAAGTTACTATATGAGAGAGAAACATAATGGTAGATCCACCAACCAGTGTGACCAAATGCATTTGATTCTGTTGAAATATAATTACATCCATGGATTACATAACTTGGAGTGGGGATGAAGTAACAGAACCTGCCAAAAGACCACCATAAAGAACACTAAGGATTTATATGACAAAGGTTGCATTGACCAAGTTAGCGCCATCAGCTAGTTGCAGCCAAATCTTAACAATATACTGCTGNTTGTGTGTGATATCTATCATTTAGAATTTCATTCTTGTTGTTCCAGAATTATCAGTTTACATGACCTGGTTCTAGATAGTTCCATTCAAAGAAACTCTTCAAGCCAATCATCTTGC]

[+] EMBL CB629706             [AGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGGTCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGTGAGTACCCCCAATCGATCCACAGGCAAATCTATCTCTTGCGGAGTTCAGTTGCTCTCTGAATTGTGGATTGTAAAGCAAAGTAAGATCTTTTCGTTTGTGTGCCTATTCGCATGTCTTGGGGGTGATATCAGGGAAAATTAGAATGTTGGGAAAGTTTTGACCTCTCGGCATAAAAACCGTGTTTTGGTAATCTATATAGCGTAGTCCCACTTTGTGGAAGAAATCGAGTTTTCGTAATCAACATGCTAGAGTGCAGGCTACGCTGAAGAAATATGGTTTGAGCATGCAGGATGGCAACATGAACATGCCATTGAGACCCAGTCATTTAGGAAAAATATATTAACCACTTGTGCCAACTTGCTAATAATTTTCTAGTTGGGCCTGACTAAAATTAATTTTCTAATTGTGTGAGACCGTGGGAGAATCGGTAGTTCACAAATTTTAATCATACTTATACTTAAGTTACTATATGAGAGAGAAACATAATGGTAGATCCACCAACCAGTGTGACCAAATGCATTTGATTCTGTTGAAATATAATTACATCCATGGA                                                                                                                                                                                                                                                                     ]
[+] EMBL CB674916             [                                                                                                                                                                            GGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGTGAGTACCCCCAATCGATCCACAGGCAAATCTATCTCTTGCGGAGTTCAGTTGCTCTCTGAATTGTGGATTGTAAAGCAAAGTAAGATCTTTTCGTTTGTGTGCCTATTCGCATGTCTTGGGGGTGATATCAGGGAAAATTAGAATGTTGGGAAAGTTTTGACCTCTCGGCATAAAAACCGTGTTTTGGTAATCTATATAGCGTAGTCCCACTTTGTGGAAGAAATCGAGTTTTCGTAATCAACATGCTAGAGTGCAGGCTACGCTGAAGAAATATGGTTTGAGCATGCAGGATGGCAACATGAACATGCCATTGAGACCCAGTCATTTAGGAAAAACATATTAACCACTTGTGCCAACTTGCTAATAATTGTCTAGTTGGGCCTGACTAAAATTAATTTTCTAATTGTGTGAGACCGTGGGAGAATCGGTAGTTCACAAATTTTAATCATACTTATACTTAAGTTACTATATGAGAGAGAAACATAATGGTAGATCCACCAACCAGTGTGACCAAATGCATTTGATTCTGTTGAAATATAATTACATCCATGGATTACATAACTTGGAGTGGGGATGAAGTAACAGAACCTGCCAAAAGACCACCATAAAGAACACTAAGGATTTATATGACAAAGGTTGCATTGACCAAGTTAGCGCCATCAGCTAGTTGCAGCCAAATCTTAACAATATACTGCTGNTTGTGTGTGATATCTATCATTTAGAATTTCATTCTTGTTGTTCCAGAATTATC                                                               ]
[+] EMBL CB674145             [                                                                                                                                                                                                                                               CACAGGCAATTCTATCTCTTGCGGAGTTCAGTTGCTCTCTGAATTGTGGATTGTAAAGCAAAGTAAGATCTTTTCGTTTGTGTGCCTATTCGCATGTCTTGGGGGTGATATCAGGGAAAATTAGAATGTTGGGAAAGTTTTGACCTCTCGGCATAAAAACCGTGTTTTGGTAATCTATATAGCGTAGTCCCACTTTGTGGAAGAAATCGAGTTTTCGTAATCAACATGCTAGAGTGCAGGCTACGCTGAAGAAATATGGTTTGAGCATGCAGGATGGCAACATGAACATGCCATTGAGACCCAGTCATTTAGGAAAAACATATTAACCACTTGTGCCAACTTGCTAATAATTGTCTAGTTGGGCCTGACTAAAATTAATTTTCTAATTGTGTGAGACCGTGGGAGAATCGGTAGTTCACAAATTTTAATCATACTTATACTTAAGTTACTATATGAGAGAGAAACATAATGGTAGATCCACCAACCAGTGTGACCAAATGCATTTGATTCTGTTGAAATATAATTACATCCATGGATTACATAACTTGGAGTGGGGATGAAGTAACAGAACCTGCCAAAAGACCACCATAAAGAACACTAAGGATTTATATGACAAAGGTTGCATTGACCAAGTTAGCGCCATCAGCTAGTTGCAGCCAAATCTTAACAATATACTGCTGTTTGTGTGTGATATCTATCATTTAGAATTTCATTCTTGTTGTTCCAGAATTATCAGTTTACATGACCTGGTTCTAGATAGTTCCATTCAAAGAAACTCTTCAAGCCAATCATCTTGC]


>consensus_5778#0 AGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGG ACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACC TCGTCGTCATGGTCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAGC AGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGTGAGTACCCCCAATCGATCC ACAGGCAAATCTATCTCTTGCGGAGTTCAGTTGCTCTCTGAATTGTGGATTGTAAAGCAA AGTAAGATCTTTTCGTTTGTGTGCCTATTCGCATGTCTTGGGGGTGATATCAGGGAAAAT TAGAATGTTGGGAAAGTTTTGACCTCTCGGCATAAAAACCGTGTTTTGGTAATCTATATA GCGTAGTCCCACTTTGTGGAAGAAATCGAGTTTTCGTAATCAACATGCTAGAGTGCAGGC TACGCTGAAGAAATATGGTTTGAGCATGCAGGATGGCAACATGAACATGCCATTGAGACC CAGTCATTTAGGAAAAACATATTAACCACTTGTGCCAACTTGCTAATAATTGTCTAGTTG GGCCTGACTAAAATTAATTTTCTAATTGTGTGAGACCGTGGGAGAATCGGTAGTTCACAA ATTTTAATCATACTTATACTTAAGTTACTATATGAGAGAGAAACATAATGGTAGATCCAC CAACCAGTGTGACCAAATGCATTTGATTCTGTTGAAATATAATTACATCCATGGATTACA TAACTTGGAGTGGGGATGAAGTAACAGAACCTGCCAAAAGACCACCATAAAGAACACTAA GGATTTATATGACAAAGGTTGCATTGACCAAGTTAGCGCCATCAGCTAGTTGCAGCCAAA TCTTAACAATATACTGCTGNTTGTGTGTGATATCTATCATTTAGAATTTCATTCTTGTTG TTCCAGAATTATCAGTTTACATGACCTGGTTCTAGATAGTTCCATTCAAAGAAACTCTTC AAGCCAATCATCTTGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)