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Oryza sativa
cluster # 5793 cluster # 5793       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5793#0 length = 947 sequences # 3  

consensusID : consensus_5793#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 947
fasta sequence
                              [CAACTAGCTAGGNTCCCTGCATGCCCTCCCGCGTCCAACGTGAGCAACATCACCGAAGCCGGTCGCTGATCGGAGGAAAACCCAAAAAAGAAAGAAAAAAACGACGAAATGGCTTCCTCCCCGTATCACGCCGCCGTCGGTGTCGCCGTCCTTGCCATCCTCCTCGCCGCGCCGGCTGCGGAGGCCGGGGCACCTACCGCCGCGCCGTTGGCCAACTACTCCCTCGAGGACGCGTGCAAGAAGACCGGCCCACACTACGGNCTCTGCATCGTGACGCTCTCCGCCGACCGGTCCGCCAAGTCGTCGGACACGGTGGGGCTCGCCAGGGTGGCCGTCCTGGCGGCGCAGAAGAACGCGTCGGAGACGGCCACCTACCTCTCCAGCATCTACGACGACGACAGCATCGAGAAGAAGACGGTGCAGCTGCAGCAGTGCCTCGAGGACTGCTCCGAGAGGTACGAGGCGGCGGTGGAGCAGCTGACGGACGCGACGGTGGCGCTGGACACGGGGGGGTACGAGGAGGCGATGGCGCTGGTGGCGGCGGGGCAGGCGGAGGTGAAGATGTGCCAGAGGGGGTTCAAGGCCGTGCCGCAGCACCGGAACATCCTCACCTTGCGCAACCGCGAGGTCGACCAGCTCTGCAGCATCGCCTTCACCATCACCAAGCTGATCCGCGTGTCACCGAGCGCTGAAGAATAGCTTTCTCTTCTTCCTTTTATCCCCTGGATATTCTTTTTTATTTTTTCGACGACAGGGGTAATCTGGGATTCCATGGTTGGAAGATTAGCATGTTTGTTGATGGCTTTGAATTGGATTGGTAATTGCTGTTTGCATCAGCAGACAACATCCTAGGCGCTGGCGGTGGTGGAACTGTTGTTGGGTTCATACGATCAATGTATAGCACATTCTTGATCTTAAAAAGAGCATTGCTTAATTTATGCAAAAAA]

[+] EMBL C93615               [CAACTAGCTAGGNTCCCTGCATGCCCTCCCGCGTCCAACGTGAGCAACATCACCGAAGCCGGTCGCTGATCGGAGGAAAACCCAAAAAAGAAAGAAAAAAACGACGAAATGGCTTCCTCCCCGTATCACGCCGCCGTCGGTGTCGCCGTCCTTGCCATCCTCCTCGCCGCGCCGGCTGCGGAGGCCGGGGCACCTACCGCCGCGCCGTTGGCCAACTACTCCCTCGAGGACGCGTGCAAGAAGACCGGCCCACACTACGGNCTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK072493             [                                    AACGTGAGCAACATCACCGAAGCCGGTCGCTGATCGGAGGAAAACCCAAAAAAGAAAGAAAAAAACGACGAAATGGCTTCCTCCCCGTATCACGCCGCCGTCGGTGTCGCCGTCCTTGCCATCCTCCTCGCCGCGCCGGCTGCGGAGGCCGGGGCACCTACCGCCGCGCCGTTGGCCAACTACTCCCTCGAGGACGCGTGCAAGAAGACCGGCCCACACTACGGCCTCTGCATCGTGACGCTCTCCGCCGACCGGTCCGCCAAGTCGTCGGACACGGTGGGGCTCGCCAGGGTGGCCGTCCTGGCGGCGCAGAAGAACGCGTCGGAGACGGCCACCTACCTCTCCAGCATCTACGACGACGACAGCATCGAGAAGAAGACGGTGCAGCTGCAGCAGTGCCTCGAGGACTGCTCCGAGAGGTACGAGGCGGCGGTGGAGCAGCTGACGGACGCGACGGTGGCGCTGGACACGGGGGGGTACGAGGAGGCGATGGCGCTGGTGGCGGCGGGGCAGGCGGAGGTGAAGATGTGCCAGAGGGGGTTCAAGGCCGTGCCGCAGCACCGGAACATCCTCACCTTGCGCAACCGCGAGGTCGACCAGCTCTGCAGCATCGCCTTCACCATCACCAAGCTGATCCGCGTGTCACCGAGCGCTGAAGAATAGCTTTCTCTTCTTCCTTTTATCCCCTGGATATTCTTTTTTATTTTTTCGACGACAGGGGTAATCTGGGATTCCATGGTTGGAAGATTAGCATGTTTGTTGATGGCTTTGAATTGGATTGGTAATTGCTGTTTGCATCAGCAGACAACATCCTAGGCGCTGGCGGTGGTGGAACTGTTGTTGGGTTCATACGATCAATGTATAGCACATTCTTGATCTTAAAAAG                         ]
[+] EMBL AU093776             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCACCGAGCGCTGAAGAATAGCTTTCTCTTCTTCCTTTTATCCCCTGGATATTCTTTTTTATTTTTTCGACGACAGGGNTAATCTGGGATTCCATGGTTGGAAGATTAGCATGTTTGTTGATGGCTTTGAATTGGATTGGTAATTGCTGTTTGCATCAGCAGACAACATCCTAGGCGCTGNCGNTGNTGGAACTGTTGTTGGGTTCATACGATCAATGTATAGCACATTCTTGATCTTAAAAAGAGCATTGCTTAATTTATGCAAAAAA]


>consensus_5793#0 CAACTAGCTAGGNTCCCTGCATGCCCTCCCGCGTCCAACGTGAGCAACATCACCGAAGCC GGTCGCTGATCGGAGGAAAACCCAAAAAAGAAAGAAAAAAACGACGAAATGGCTTCCTCC CCGTATCACGCCGCCGTCGGTGTCGCCGTCCTTGCCATCCTCCTCGCCGCGCCGGCTGCG GAGGCCGGGGCACCTACCGCCGCGCCGTTGGCCAACTACTCCCTCGAGGACGCGTGCAAG AAGACCGGCCCACACTACGGNCTCTGCATCGTGACGCTCTCCGCCGACCGGTCCGCCAAG TCGTCGGACACGGTGGGGCTCGCCAGGGTGGCCGTCCTGGCGGCGCAGAAGAACGCGTCG GAGACGGCCACCTACCTCTCCAGCATCTACGACGACGACAGCATCGAGAAGAAGACGGTG CAGCTGCAGCAGTGCCTCGAGGACTGCTCCGAGAGGTACGAGGCGGCGGTGGAGCAGCTG ACGGACGCGACGGTGGCGCTGGACACGGGGGGGTACGAGGAGGCGATGGCGCTGGTGGCG GCGGGGCAGGCGGAGGTGAAGATGTGCCAGAGGGGGTTCAAGGCCGTGCCGCAGCACCGG AACATCCTCACCTTGCGCAACCGCGAGGTCGACCAGCTCTGCAGCATCGCCTTCACCATC ACCAAGCTGATCCGCGTGTCACCGAGCGCTGAAGAATAGCTTTCTCTTCTTCCTTTTATC CCCTGGATATTCTTTTTTATTTTTTCGACGACAGGGGTAATCTGGGATTCCATGGTTGGA AGATTAGCATGTTTGTTGATGGCTTTGAATTGGATTGGTAATTGCTGTTTGCATCAGCAG ACAACATCCTAGGCGCTGGCGGTGGTGGAACTGTTGTTGGGTTCATACGATCAATGTATA GCACATTCTTGATCTTAAAAAGAGCATTGCTTAATTTATGCAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)