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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5819 cluster # 5819       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5819#0 length = 1088 sequences # 3  

consensusID : consensus_5819#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1088
fasta sequence
                              [GAACAGGAAATCCTGGATTCGAGAGAGAAGACTGAGTTCTATCGCACAAAGATGCAGGAGCTTATTCTTTACAAAAGTAGGTGCGATAACAGGTTTAATGAAGTTTCAGAAAGGATGTCTGCTGATAAACGTGAGGTTCAATCCCTTGCAGCGAAATATGATGAGAGATGTAAGAAGGTTGGAGATGTAGCATCAAAGTTATCGATGGATGAGGCCACTTTCCGTGAGATTCAGGAGAAGAAATTGGAGATTTATAATGCGATAGTTAAACTGCAGAAAGGGGATGGAAATGATGAAAAGCTTCAGGAGCGAGCTAACCAGATACAATCTGATCTTGAGGAGCTTGTTAAATCTTTGAATGAACAGTGCAAGAGATATGGGTTGAGAGCTAAGCCAACTACTCTTGTGGAGCTTCCTTTTGGTTGGCAACCTGGAATACAAGAGACAGCAGCTGTATGGGATGAAGAATGGGACAAATTTGGTGATGATGGCTTCTCCACAATAAAGGAACTCACAGTTGAAATGGAGCCACCTGTTGTACAAAAGGATCAGCCTACCGTTGAAGACAGTAAAGTGTCTACCAATGGGCCATCAGCACCTACATCAACAGAGAAAGAAGATAGCAGGGGTGATAAATCTGCCGCTGCCTCTGAGCAAACTGTAGAACCTGATGCAACTCCTTCCGATAGCAAAACGGTTGCAGCAAAAAGTCCTCCAGTTAGTCCTGTTAAGAACACAAAGGATGGCCATAGTGATGAACGTGATAAAAAACAATCTGGGACAAACGACACCTCGTCACGTGCAATTGAGAGTGTCAGTAACAATGGAGGAGCAGATTCCCCTGTTCATGGAGAAAAGAGAGACGATTCACATTATTGGGGCCCATCGTTTGATAATGGTGATGATAATGACTCCCTATGGAACTTCAATCGCAAGGATGGTGAGAATGGTGATTCAGACCTATTATTTGGGCCACAAGGTCTTCCTCCAATAAGGACCGGAGGCTCTTCGACGGCTGGTAGTGTTTATGGCAAGGAACAGAAACCATTCTTTGATTCTGTCCCAGGTACTCCAGTGGAGAAGCCTTT]

[+] EMBL CB644763             [GAACAGGAAATCCTGGATTCGAGAGAGAAGACTGAGTTCTATCGCACAAAGATGCAGGAGCTTATTCTTTACAAAAGTAGGTGCGATAACAGGTTTAATGAAGTTTCAGAAAGGATGTCTGCTGATAAACGTGAGGTTCAATCCCTTGCAGCGAAATATGATGAGAGATGTAAGAAGGTTGGAGATGTAGCATCAAAGTTATCGATGGATGAGGCCACTTTCCGTGAGATTCAGGAGAAGAAATTGGAGATTTATAATGCGATAGTTAAACTGCAGAAAGGGGATGGAAATGATGAAAAGCTTCAGGAGCGAGCTAACCAGATACAATCTGATCTTGAGGAGCTTGTTAAATCTTTGAATGAACAGTGCAAGAGATATGGGTTGAGAGCTAAGCCAACTACTCTTGTGGAGCTTCCTTTTGGTTGGCAACCTGGAATACAAGAGACAGCAGCTGTATGGGATGAAGAATGGGACAAATTTGGTGATGATGGCTTCTCCACAATAAAGGAACTCACAGTTGAAATGGAGCCACCTGTTGTACAAAAGGATCAGCCTACCGTTGAAGACAGTAAAGTGTCTACCAATGGGCCATCAGCACCTACATCAACAGAGAAAGAAGATAGCAGGGGTGATAAATCTGCCGCTGCCTCTGAGCAAACTGTAGAACCTGATGCAACTCCTTCCGATAGCAAAACGGTTGCAGCAAAAAGTCCTCCAGTTAGTCCTGTTAAGAACACAAAGGATGGCCATAGTGATGAACGTGATAAAAAACAATCTGGGACAAACGACACCTCGTCA                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB660889             [                                                                                                     AGTTTCAGAAAGGATGTCTGCTGATAAACGTGAGGTTCAATCCCTTGCAGCGAAATATGATGAGAGATGTAAGAAGGTTGGAGATGTAGCATCAAAGTTATCGATGGATGAGGCCACTTTCCGTGAGATTCAGGAGAAGAAATTGGAGATTTATAATGCGATAGTTAAACTGCAGAAAGGGGATGGAAATGATGAAAAGCTTCAGGAGCGAGCTAACCAGATACAATCTGATCTTGAGGAGCTTGTTAAATCTTTGAATGAACAGTGCAAGAGATATGGGTTGAGAGCTAAGCCAACTACTCTTGTGGAGCTTCCTTTTGGTTGGCAACCTGGAATACAAGAGACAGCAGCTGTATGGGATGAAGAATGGGACAAATTTGGTGATGATGGCTTCTCCACAATAAAGGAACTCACAGTTGAAATGGAGCCACCTGTTGTACAAAAGGATCAGCCTACCGTTGAAGACAGTAAAGTGTCTACCAATGGGCCATCAGCACCTACATCAACAGAGAAAGAAGATAGCAGGGGTGATAAATCTGCCGCTGCCTCTGAGCAAACTGTAGAACCTGATGCAACTCCTTCCGATAGCAAAACGGTTGCAGCAAAAAGTCCTCCAGTTAGTCCTGTTAAGAACACAAAGGATGGCCATAGTGATGAACGTGATAAAAAACAATCTGGGACAAACGACACCTCGTCACGTGCAATTGAGAGTGTCAGTAACAATGGAGGAGCAGATTCCCCTGTTCATGGAGAAAAGAGAGACGATTCACATTATTGGGGCCCATCGTTTGATAATGGTGATGATAATGACTCCCTATGG                                                                                                                                                                       ]
[+] EMBL CB630800             [                                                                                                                                                                                                                                                                                     AAGGGGATGGAAATGATGAAAAGCTTCAGGAGCGAGCTAACCAGATACAATCTGATCTTGAGGAGCTTGTTAAATCTTTGAATGAACAGTGCAAGAGATATGGGTTGAGAGCTAAGCCAACTACTCTTGTGGAGCTTCCTTTTGGTTGGCAACCTGGAATACAAGAGACAGCAGCTGTATGGGATGAAGAATGGGACAAATTTGGTGATGATGGCTTCTCCACAATAAAGGAACTCACAGTTGAAATGGAGCCACCTGTTGTACAAAAGGATCAGCCTACCGTTGAAGACAGTAAAGTGTCTACCAATGGGCCATCAGCACCTACATCAACAGAGAAAGAAGATAGCAGGGGTGATAAATCTGCCGCTGCCTCTGAGCAAACTGTAGAACCTGATGCAACTCCTTCCGATAGCAAAACGGTTGCAGCAAAAAGTCCTCCAGTTAGTCCTGTTAAGAACACAAAGGATGGCCATAGTGATGAACGTGATAAAAAACAATCTGGGACAAACGACACCTCGTCACGTGCAGTTGAGAGTGTCAGTAACAATGGAGGAGCAGATTCCCCTGTTCATGGAGAAAAGAGAGACGATTCACATTATTGGGGCCCATCGTTTGATAATGGTGATGATAATGACTCCCTATGGAACTTCAATCGCAAGGATGGTGAGAATGGTGATTCAGACCTATTATTTGGGCCACAAGGTCTTCCTCCAATAAGGACCGGAGGCTCTTCGACGGCTGGTAGTGTTTATGGCAAGGAACAGAAACCATTCTTTGATTCTGTCCCAGGTACTCCAGTGGAGAAGCCTTT]


>consensus_5819#0 GAACAGGAAATCCTGGATTCGAGAGAGAAGACTGAGTTCTATCGCACAAAGATGCAGGAG CTTATTCTTTACAAAAGTAGGTGCGATAACAGGTTTAATGAAGTTTCAGAAAGGATGTCT GCTGATAAACGTGAGGTTCAATCCCTTGCAGCGAAATATGATGAGAGATGTAAGAAGGTT GGAGATGTAGCATCAAAGTTATCGATGGATGAGGCCACTTTCCGTGAGATTCAGGAGAAG AAATTGGAGATTTATAATGCGATAGTTAAACTGCAGAAAGGGGATGGAAATGATGAAAAG CTTCAGGAGCGAGCTAACCAGATACAATCTGATCTTGAGGAGCTTGTTAAATCTTTGAAT GAACAGTGCAAGAGATATGGGTTGAGAGCTAAGCCAACTACTCTTGTGGAGCTTCCTTTT GGTTGGCAACCTGGAATACAAGAGACAGCAGCTGTATGGGATGAAGAATGGGACAAATTT GGTGATGATGGCTTCTCCACAATAAAGGAACTCACAGTTGAAATGGAGCCACCTGTTGTA CAAAAGGATCAGCCTACCGTTGAAGACAGTAAAGTGTCTACCAATGGGCCATCAGCACCT ACATCAACAGAGAAAGAAGATAGCAGGGGTGATAAATCTGCCGCTGCCTCTGAGCAAACT GTAGAACCTGATGCAACTCCTTCCGATAGCAAAACGGTTGCAGCAAAAAGTCCTCCAGTT AGTCCTGTTAAGAACACAAAGGATGGCCATAGTGATGAACGTGATAAAAAACAATCTGGG ACAAACGACACCTCGTCACGTGCAATTGAGAGTGTCAGTAACAATGGAGGAGCAGATTCC CCTGTTCATGGAGAAAAGAGAGACGATTCACATTATTGGGGCCCATCGTTTGATAATGGT GATGATAATGACTCCCTATGGAACTTCAATCGCAAGGATGGTGAGAATGGTGATTCAGAC CTATTATTTGGGCCACAAGGTCTTCCTCCAATAAGGACCGGAGGCTCTTCGACGGCTGGT AGTGTTTATGGCAAGGAACAGAAACCATTCTTTGATTCTGTCCCAGGTACTCCAGTGGAG AAGCCTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)