cluster # 5822

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Oryza sativa
cluster # 5822 cluster # 5822 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5822#0 length = 814 sequences # 3

consensusID : consensus_5822#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 814
fasta sequence

                              [TGTCCCGCTCTACTTCTTCCCTTTCTTGTATCAGAGCTATGATCTTGCAAGCTCAAAATTCAAGGTGTCAACAGAAGCTGTTGTTCTCATTGATAATTTCCCTCAGCCAAGCAATTCCATCTCAGTGGTCATGGAGTATTCTCTGAACATTACAAGAGACAGGCTAATTCTAACTTTTGTGCCGGAAGGGAACAGTACATCCTTCGTCAACGCCATTGAAGTTGTGTCGGTTCCTGATGATCTAATTACTGATTCGGCGCAACTTCTGGGTGTTGGGCAGTATCTTGGACTGGCAGCACAGCCATTGCAAACATTCCACAGGATCAATGTGGGCGGGCCGAAGGTCACAGCTGAAAATGATACTCTGGCTCGAACATGGTTTGCTGATCAGAGCTTCTTCAGAAATCCCACTGTCGCTCAAGCAGTTACTTACCAAGAAAGACTG-ATTACAAAGATGGATCAGCAACGAAGGATTGATGCACCAGACAGTGTCTACAATACTGCGAGGCGGTTGG-TTGGGCAGAGGAACGCCAGCTCCACGCCAAACATGACAT-GGGAATTCAAT-GTTGATGGCCGTTCAAGCTACCTGATTCGGTTCCATTTCTGCGACATAGTGAGCAAGGCAGCATTTCAGCTCTACTTTGATGTCTATGTTTATAACTTTTCAGCAGCAAAAGATCTTGATCTCTCCGCCAGTGAATTTGGTACACTGGCGGCGCCATTCTACATGGATATTGTCTTACCATCAAGTGACCCGTCAGGTAACCTCACTGTCAGCATANGTCCTTCCAGCTTGCCTAATGCAACACCTGAT]

[+] EMBL CB630869             [TGTCCCGCTCTACTTCTTCCCTTTCTTGTATCAGAGCTATGATCTTGCAAGCTCAAAATTCAAGGTGTCAACAGAAGCTGTTGTTCTCATTGATAATTTCCCTCAGCCAAGCAATTCCATCTCAGTGGTCATGGAGTATTCTCTGAACATTACAAGAGACAGGCTAATTCTAACTTTTGTGCCGGAAGGGAACAGTACATCCTTCGTCAACGCCATTGAAGTTGTGTCGGTTCCTGATGATCTAATTACTGATTCGGCGCAACTTCTGGGTGTTGGGCAGTATCTTGGACTGGCAGCACAGCCATTGCAAACATTCCACAGGATCAATGTGGGCGGGCCGAAGGTCACAGCTGAAAATGATACTCTGGCTCGAACATGGTTTGCTGATCAGAGCTTCTTCAGAAATCCCACTGTCGCTCAAGCAGTTACTTACCAAGAAAGACTGAATTACAAAGATGGATCAGCAACGCAGGA TGATGCACCAGACAGTGTCTACAATACTGCGAGGCGGTTGG TTGGGCAGAGGAACGCCAGCTCCACGCCAAACATGACAT GGGAATTCAAT GTTGATGGCCGTTCAAGCTACCTGATTCGGTTCCATTTCTGCGACATAGTGAGCAAGGCAGCATTTCAGCTCTACTTTGATGTCTATGTTTATAACTTTTCAGCAGCAAAAGATCTTGATCTCTCCGCCAGTGAATTTGGTACACTGGCGGCGCCATTCTACATGGATATTGTCTTACCATCAAGTGACCCGTCAGGTAACCTCACTGTCAGCATANGTCCTTCCAGCTTGCCTAATGCAACACCTGAT]
[+] EMBL OSS4331A             [                                                                                                                                                      TACAAGAGACAGGCTAATTCTAACTTTTGTGCCGGAAGGGAACAGTACATCCTTCGTCAACGCCATTGAAGTTGTGTCGGTTCCTGATGATCTAATTACTGATTCGGCGCAACTTCTGGGTGTTGGGCAGTATCTTGGACTGGCAGCACAGCCATTGCAAACATTCCACAGGATCAATGTGGGCGGGCCGAAGGTCACAGCTGAAAATGATACTCTGGCTCGAACATGGTTTGCTGATCAGAGCTTCTTCAGAAATCCCACTGTCGCTCAAGCAGTTACTTACCAAGAAAGACTG ATTACAAAGATGGATCAGCAACGAAGGATTGATGCACCAGACAGTGTCTACAATACTGCGAGGCGGTTGGNTTGGGCAGNGGNCCG CAGCTCCACGGCAAACATGACATGGGGAATTCAATGGTTGATGGCCG TCAAGTTACCT                                                                                                                                                                                                                                  ]
[+] EMBL OSS3470A             [                                                                                                                                                      TACAAGAGACAGGCTAATTCTAACTTTTGTGCCGGAAGGGAACAGTACATCCTTCGTCAACGNCATTGAAGTTGTGTCGGTTCCTGATGATCTAATTACTGATTCGGCGNAACTTCTGGGTGTTGGGCAGTATCTTGGACTGGCAGCACAGCCATTGCAAACATTCCACAGGATCAATGTGGGCGGGCCGAAGGTCACAGNTGAAAATGATACTCTGGCTCGAACATGGTTTGCTGATCAGAGCTTCTTCAGAAATCCCACTGTCGATCAAGCAGTTACTTACCAAGAAAGTCTG ATTACAAAGATGGATCAGCAACGAAGGATTGATGCACCAGNCAGTGTCTACAAata                                                                                                                                                                                                                                                                                                                            ]




>consensus_5822#0
TGTCCCGCTCTACTTCTTCCCTTTCTTGTATCAGAGCTATGATCTTGCAAGCTCAAAATT
CAAGGTGTCAACAGAAGCTGTTGTTCTCATTGATAATTTCCCTCAGCCAAGCAATTCCAT
CTCAGTGGTCATGGAGTATTCTCTGAACATTACAAGAGACAGGCTAATTCTAACTTTTGT
GCCGGAAGGGAACAGTACATCCTTCGTCAACGCCATTGAAGTTGTGTCGGTTCCTGATGA
TCTAATTACTGATTCGGCGCAACTTCTGGGTGTTGGGCAGTATCTTGGACTGGCAGCACA
GCCATTGCAAACATTCCACAGGATCAATGTGGGCGGGCCGAAGGTCACAGCTGAAAATGA
TACTCTGGCTCGAACATGGTTTGCTGATCAGAGCTTCTTCAGAAATCCCACTGTCGCTCA
AGCAGTTACTTACCAAGAAAGACTGATTACAAAGATGGATCAGCAACGAAGGATTGATGC
ACCAGACAGTGTCTACAATACTGCGAGGCGGTTGGTTGGGCAGAGGAACGCCAGCTCCAC
GCCAAACATGACATGGGAATTCAATGTTGATGGCCGTTCAAGCTACCTGATTCGGTTCCA
TTTCTGCGACATAGTGAGCAAGGCAGCATTTCAGCTCTACTTTGATGTCTATGTTTATAA
CTTTTCAGCAGCAAAAGATCTTGATCTCTCCGCCAGTGAATTTGGTACACTGGCGGCGCC
ATTCTACATGGATATTGTCTTACCATCAAGTGACCCGTCAGGTAACCTCACTGTCAGCAT
ANGTCCTTCCAGCTTGCCTAATGCAACACCTGAT

clustalw multiple alignements is not computed in this case