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Oryza sativa
cluster # 5844 cluster # 5844       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5844#0 length = 3255 sequences # 2  
 consensus_5844#1 length = 608 sequences # 1  
consensusID : consensus_5844#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3255
fasta sequence 
                              [TTTTNCTCCCGGACCCCCTCCTCCCCAGTCTCCAACTCCACCATTTGGCTCATCCAGTCATCGCCCACTTGCTCTAGATTCATCCCCAAATATTTNNTTCTCAAGGTTTATTATAGCATTTNATTTTTAAGAAGAGTTCACAAACAGGAGTAGATACAAGAACATTCAGGATGAGTGTTGATCCATTCCGGTTCTATGTGTAGGAAGAGGAATAATGGCATGCATTAGTCATGTCTTGAGCAAGAGTTGGAGTGCTGCTGCCACAGTAGTCTTCTCCTTTTTGTNCTCTAGCATTTGGCCATAAGCCATAGTTCTTTCTCGAGCTGTTGTTNCTGCAAAGGCATTGTCGCAAAGTCATGANGAATTTTGATGGTGGCAAATTAATGCCTATCCGGAGAAAGAGTTGAAGCGACTGGNTTTCCAGGATTTGTTGCATTTATTCGCTCATAAGAAACGGCAAGAGAGAGAGAGAGAGATAGAGAGAGGGGAAGCAAGAAGAGGCTTTGAAAGATTTTTGAGTTTGAATTTCTTGTTCTTGTGGGCGTGTGCGTGTGGAGCGGTGGAGGCATGAAAGGCGGCAGCTCCGCCACCGCGGCGAGCGGCGGCGGCGGCAACAGCCTGGCGATCGTCGAGCGGCAGAAGCCGGCGACGTCGTGCGTGGCGTCGCTGTTCCAGATGCTCGCCAAGAAGAAGCTCTTCTCCTCGTCCTCCAAGAAGACCAAGCTGCTTCCCCCAGTGCGCACACAGAAGTTCTCGCCTGGGAGACCACCTGCCGGCGGCGAGAAGACGCCGGCGGCCAAGATGAGGACTCTGCTGCTTGATGCTCCATACTATCCAAATGAAGTTACCACTCGCTTGCCACCTCCTGGCCAAGACAACAAAAGCAGTGAAATGTGCACACCGGGTGTGGTAGCCAGGCTAATGGGGCTCAGCGCAATGCCAGCCACCAGCCATCAAAAGGCAGTAAAAACCATGGATGCCTCCGAGCTTGGTGGTCACCGGAGTGAATGCTCCTATGGAAGCATATACAACTCGCATCAGAGGCAACAAAAGCCAGGGCATATCAGAGATGGCCGGCATGACAATGGCAATCAGCTCGATGCAGATGCGCAGCCGGTGTGGTCACGGAAGCATGCAGCACACAAGTTAGCCTCACCTATTAAGAGTCCAAGATCAGTTTCAAGCAGGAACAAGGTTAGGCTGATTGAAGCAGCAGTCAAGGTCCTGGAACCCGGTTTACAATCCAGGCACCACCATCAGGCTCGGAGGCAAGCGCGCCTCGAGTATAGATGCAACAGCAGTGATGTGCAGAGTGCTGCTGAAGCCATGCACGATTTCTCCGATCAATTCGCAAGAGAAATGTGTGATGTTGATGCATCAAGGTCAGGTGCTCAAAATGTAGGAGCCACCTCTCTGCACAATTCTACTTCCAATCAGTGGTCCGAAGAGGATACTATGAGGAATGTTTCTGTTAGGAGGCCAAACCAGAACATATCATGTCAAGCACAATCTGAGGGAAACCATAAGGGTCAGAGGAACGGATTTAAGGACAGTGGTCAGAGAACATCAGATGATGTCCTTGTTTCAAGTCAAGGTGTCCAAAAAATACAGCCGAAAAACATATCCCGAGAGAATGTTGATTGTAGACCTCTTAAACAGAACAATCTGAAGCAGAATGCATTGCCTGAAACTTATAGAGCAGCAGATACAGGGCATATGGTCCAAAGGCAGAAACATAGAGCTAAGGAGCAAAATGTGGCAAACACAGCCAATGACTTTGTCTGTTCAAACAGAGGTATGAACAACAGTGCATCTTTGAGGTCCAAAGGAAAAGTAAAGGATAAAATCGGCATGCCACATGGTAGTGCGGAGAACAGGAACTTGAGCACAAAATGTCACCGAACCAGTGGCCTGCATGGTGATTGTTCTAATAAACAGATATCAAAGACTGCAACACTGAAAGCTACAGAGAAAGACATGATAATTGCAAAAGGTGCAGGGTTAGTTAGTGAGAAGCCAAAGTCTACCAGTCCAAACTCTGTAAGGAATGACTCGCGGAGAAAGGTAGAGTCACGCATTGCTTCTAGGGGTAACAACTCAGGCATCATTTCCATCTCTTCTAATTCACCGAGAAAGGCTGTCCTCGCTTTGCTGAATGGTCATACTAAAGGATCAGATAGTGTTGTTCTGGGATCTCCAACTGGTTCTTGTCCTAAGAGAGACTATCGTAGGGACTGCCAAAATATTTCTTCAGAAAGGGAATTGGTCTTGAGTGAAGCTTTACAAGGCATATCAAGTCTGGAAAGTGCAGAATCAGTGTGCTTTAATCGAAATGAGTTGAGAAACAGAGAAATTCTGGACGACAGAGTAATGTCTTCATTGTTTCGAAAGACGAGTGCTATCAATGTAATGGAAGAATCTCCAAGTGATGAATTTCTATGGCAGTGTAACTTTCTGGACAGTCTGACTTTTGGCTTCAGAGAGGTTCCTAGAAGTGGTAAATTGCGTGAAACTCATAAAAAGCATGAGGTTACTACAAATGCTAGCGATCCATCTTATTATGCAGATGATGAGTGCTTTTCTGGGAGCCTGCTCAAAACTGCAGCATCAGAAGCTGGATTCAGAGACCGACGCCGCTCGGAGAATTGCACAATGCAACAAGATGGAACTAACAAAAGAAACTCCAGGTGCTCTGAAACTAATTTTGGCCAAGACAGCAGCAACCTGATACACCCTGGAGAGGTTGCAGCAACTGTTGAGCTGCTACTAACAAACGTTCGCCGGTCTACTTCTACTACTCCTCCACGAAGAAGAAGAAGAAGAAGAAGAACGGGTTCAGCTTCAACGCCGGCGTCGTCAAGGCCACAGAAGGGGAGAAGAGCAGGAGCCCGCTGGGAAGCCTCGCGTTCGATTCCGTCATGGAGTGCTTGGACTCGCTGTTCACCCAGTTCTGCGACTCAGGATACAGGTCGTTCTCGAGGGTTCCCCTGATCTGCCCCGAGGAGAGGCTGGCTGCTCAGGTGGACAGGGAGATCGCGAGGTGCAGCGGCATGGCCGGGAAGGAGGTGGATGAGCTGATCGCGAGCGACGTCCAGCACTCGGGGGTGGAGATCGGCGTGGATGTCCTGCACGAGGCGTTTGAGATTGGTGCCCAGATCGAACGGGATCTGCTCCAAGAGCTGGTGGCCGAGATCGGGATGGATATGTTGAGGCGTTTGTGACGTGATGATGATGATTTCGTAGCAATATGGTGAA]

[+] EMBL C72086               [TTTTNCTCCCGGACCCCCTCCTCCCCAGTCTCCAACTCCACCATTTGGCTCATCCAGTCATCGCCCACTTGCTCTAGATTCATCCCCAAATATTTNNTTCTCAAGGTTTATTATAGCATTTNATTTTTAAGAAGAGTTCACAAACAGGAGTAGATACAAGAACATTCAGGATGAGTGTTGATCCATTCCGGTTCTATGTGTAGGAAGAGGAATAATGGCATGCATTAGTCATGTCTTGAGCAAGAGTTGGAGTGCTGCTGCCACAGTAGTCTTCTCCTTTTTGTNCTCTAGCATTTGGCCATAAGCCATAGTTCTTTCTCGAGCTGTTGTTNCTGCAAAGGCATTGTCGCAAAGTCATGANGAATTTTGATGGTGGCAAATTAATGCCTATCCGGAGAAAGAGTTGAAGCGACTGGNTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK066555             [                                                                                                                                                                                                                                                                                                                                                AAAGGCATTGTCGCAAAGTCATGAAGAA TTTGAT GTGGC AATTAATGCCTATCCGGAGAAAGAGTTGAAGCGACTGGTTTTCCAGGATTTGTTGCATTTATTCGCTCATAAGAAACGGCAAGAGAGAGAGAGAGAGATAGAGAGAGGGGAAGCAAGAAGAGGCTTTGAAAGATTTTTGAGTTTGAATTTCTTGTTCTTGTGGGCGTGTGCGTGTGGAGCGGTGGAGGCATGAAAGGCGGCAGCTCCGCCACCGCGGCGAGCGGCGGCGGCGGCAACAGCCTGGCGATCGTCGAGCGGCAGAAGCCGGCGACGTCGTGCGTGGCGTCGCTGTTCCAGATGCTCGCCAAGAAGAAGCTCTTCTCCTCGTCCTCCAAGAAGACCAAGCTGCTTCCCCCAGTGCGCACACAGAAGTTCTCGCCTGGGAGACCACCTGCCGGCGGCGAGAAGACGCCGGCGGCCAAGATGAGGACTCTGCTGCTTGATGCTCCATACTATCCAAATGAAGTTACCACTCGCTTGCCACCTCCTGGCCAAGACAACAAAAGCAGTGAAATGTGCACACCGGGTGTGGTAGCCAGGCTAATGGGGCTCAGCGCAATGCCAGCCACCAGCCATCAAAAGGCAGTAAAAACCATGGATGCCTCCGAGCTTGGTGGTCACCGGAGTGAATGCTCCTATGGAAGCATATACAACTCGCATCAGAGGCAACAAAAGCCAGGGCATATCAGAGATGGCCGGCATGACAATGGCAATCAGCTCGATGCAGATGCGCAGCCGGTGTGGTCACGGAAGCATGCAGCACACAAGTTAGCCTCACCTATTAAGAGTCCAAGATCAGTTTCAAGCAGGAACAAGGTTAGGCTGATTGAAGCAGCAGTCAAGGTCCTGGAACCCGGTTTACAATCCAGGCACCACCATCAGGCTCGGAGGCAAGCGCGCCTCGAGTATAGATGCAACAGCAGTGATGTGCAGAGTGCTGCTGAAGCCATGCACGATTTCTCCGATCAATTCGCAAGAGAAATGTGTGATGTTGATGCATCAAGGTCAGGTGCTCAAAATGTAGGAGCCACCTCTCTGCACAATTCTACTTCCAATCAGTGGTCCGAAGAGGATACTATGAGGAATGTTTCTGTTAGGAGGCCAAACCAGAACATATCATGTCAAGCACAATCTGAGGGAAACCATAAGGGTCAGAGGAACGGATTTAAGGACAGTGGTCAGAGAACATCAGATGATGTCCTTGTTTCAAGTCAAGGTGTCCAAAAAATACAGCCGAAAAACATATCCCGAGAGAATGTTGATTGTAGACCTCTTAAACAGAACAATCTGAAGCAGAATGCATTGCCTGAAACTTATAGAGCAGCAGATACAGGGCATATGGTCCAAAGGCAGAAACATAGAGCTAAGGAGCAAAATGTGGCAAACACAGCCAATGACTTTGTCTGTTCAAACAGAGGTATGAACAACAGTGCATCTTTGAGGTCCAAAGGAAAAGTAAAGGATAAAATCGGCATGCCACATGGTAGTGCGGAGAACAGGAACTTGAGCACAAAATGTCACCGAACCAGTGGCCTGCATGGTGATTGTTCTAATAAACAGATATCAAAGACTGCAACACTGAAAGCTACAGAGAAAGACATGATAATTGCAAAAGGTGCAGGGTTAGTTAGTGAGAAGCCAAAGTCTACCAGTCCAAACTCTGTAAGGAATGACTCGCGGAGAAAGGTAGAGTCACGCATTGCTTCTAGGGGTAACAACTCAGGCATCATTTCCATCTCTTCTAATTCACCGAGAAAGGCTGTCCTCGCTTTGCTGAATGGTCATACTAAAGGATCAGATAGTGTTGTTCTGGGATCTCCAACTGGTTCTTGTCCTAAGAGAGACTATCGTAGGGACTGCCAAAATATTTCTTCAGAAAGGGAATTGGTCTTGAGTGAAGCTTTACAAGGCATATCAAGTCTGGAAAGTGCAGAATCAGTGTGCTTTAATCGAAATGAGTTGAGAAACAGAGAAATTCTGGACGACAGAGTAATGTCTTCATTGTTTCGAAAGACGAGTGCTATCAATGTAATGGAAGAATCTCCAAGTGATGAATTTCTATGGCAGTGTAACTTTCTGGACAGTCTGACTTTTGGCTTCAGAGAGGTTCCTAGAAGTGGTAAATTGCGTGAAACTCATAAAAAGCATGAGGTTACTACAAATGCTAGCGATCCATCTTATTATGCAGATGATGAGTGCTTTTCTGGGAGCCTGCTCAAAACTGCAGCATCAGAAGCTGGATTCAGAGACCGACGCCGCTCGGAGAATTGCACAATGCAACAAGATGGAACTAACAAAAGAAACTCCAGGTGCTCTGAAACTAATTTTGGCCAAGACAGCAGCAACCTGATACACCCTGGAGAGGTTGCAGCAACTGTTGAGCTGCTACTAACAAACGTTCGCCGGTCTACTTCTACTACTCCTCCACGAAGAAGAAGAAGAAGAAGAAGAACGGGTTCAGCTTCAACGCCGGCGTCGTCAAGGCCACAGAAGGGGAGAAGAGCAGGAGCCCGCTGGGAAGCCTCGCGTTCGATTCCGTCATGGAGTGCTTGGACTCGCTGTTCACCCAGTTCTGCGACTCAGGATACAGGTCGTTCTCGAGGGTTCCCCTGATCTGCCCCGAGGAGAGGCTGGCTGCTCAGGTGGACAGGGAGATCGCGAGGTGCAGCGGCATGGCCGGGAAGGAGGTGGATGAGCTGATCGCGAGCGACGTCCAGCACTCGGGGGTGGAGATCGGCGTGGATGTCCTGCACGAGGCGTTTGAGATTGGTGCCCAGATCGAACGGGATCTGCTCCAAGAGCTGGTGGCCGAGATCGGGATGGATATGTTGAGGCGTTTGTGACGTGATGATGATGATTTCGTAGCAATATGGTGAA]




>consensus_5844#0
TTTTNCTCCCGGACCCCCTCCTCCCCAGTCTCCAACTCCACCATTTGGCTCATCCAGTCA
TCGCCCACTTGCTCTAGATTCATCCCCAAATATTTNNTTCTCAAGGTTTATTATAGCATT
TNATTTTTAAGAAGAGTTCACAAACAGGAGTAGATACAAGAACATTCAGGATGAGTGTTG
ATCCATTCCGGTTCTATGTGTAGGAAGAGGAATAATGGCATGCATTAGTCATGTCTTGAG
CAAGAGTTGGAGTGCTGCTGCCACAGTAGTCTTCTCCTTTTTGTNCTCTAGCATTTGGCC
ATAAGCCATAGTTCTTTCTCGAGCTGTTGTTNCTGCAAAGGCATTGTCGCAAAGTCATGA
NGAATTTTGATGGTGGCAAATTAATGCCTATCCGGAGAAAGAGTTGAAGCGACTGGNTTT
CCAGGATTTGTTGCATTTATTCGCTCATAAGAAACGGCAAGAGAGAGAGAGAGAGATAGA
GAGAGGGGAAGCAAGAAGAGGCTTTGAAAGATTTTTGAGTTTGAATTTCTTGTTCTTGTG
GGCGTGTGCGTGTGGAGCGGTGGAGGCATGAAAGGCGGCAGCTCCGCCACCGCGGCGAGC
GGCGGCGGCGGCAACAGCCTGGCGATCGTCGAGCGGCAGAAGCCGGCGACGTCGTGCGTG
GCGTCGCTGTTCCAGATGCTCGCCAAGAAGAAGCTCTTCTCCTCGTCCTCCAAGAAGACC
AAGCTGCTTCCCCCAGTGCGCACACAGAAGTTCTCGCCTGGGAGACCACCTGCCGGCGGC
GAGAAGACGCCGGCGGCCAAGATGAGGACTCTGCTGCTTGATGCTCCATACTATCCAAAT
GAAGTTACCACTCGCTTGCCACCTCCTGGCCAAGACAACAAAAGCAGTGAAATGTGCACA
CCGGGTGTGGTAGCCAGGCTAATGGGGCTCAGCGCAATGCCAGCCACCAGCCATCAAAAG
GCAGTAAAAACCATGGATGCCTCCGAGCTTGGTGGTCACCGGAGTGAATGCTCCTATGGA
AGCATATACAACTCGCATCAGAGGCAACAAAAGCCAGGGCATATCAGAGATGGCCGGCAT
GACAATGGCAATCAGCTCGATGCAGATGCGCAGCCGGTGTGGTCACGGAAGCATGCAGCA
CACAAGTTAGCCTCACCTATTAAGAGTCCAAGATCAGTTTCAAGCAGGAACAAGGTTAGG
CTGATTGAAGCAGCAGTCAAGGTCCTGGAACCCGGTTTACAATCCAGGCACCACCATCAG
GCTCGGAGGCAAGCGCGCCTCGAGTATAGATGCAACAGCAGTGATGTGCAGAGTGCTGCT
GAAGCCATGCACGATTTCTCCGATCAATTCGCAAGAGAAATGTGTGATGTTGATGCATCA
AGGTCAGGTGCTCAAAATGTAGGAGCCACCTCTCTGCACAATTCTACTTCCAATCAGTGG
TCCGAAGAGGATACTATGAGGAATGTTTCTGTTAGGAGGCCAAACCAGAACATATCATGT
CAAGCACAATCTGAGGGAAACCATAAGGGTCAGAGGAACGGATTTAAGGACAGTGGTCAG
AGAACATCAGATGATGTCCTTGTTTCAAGTCAAGGTGTCCAAAAAATACAGCCGAAAAAC
ATATCCCGAGAGAATGTTGATTGTAGACCTCTTAAACAGAACAATCTGAAGCAGAATGCA
TTGCCTGAAACTTATAGAGCAGCAGATACAGGGCATATGGTCCAAAGGCAGAAACATAGA
GCTAAGGAGCAAAATGTGGCAAACACAGCCAATGACTTTGTCTGTTCAAACAGAGGTATG
AACAACAGTGCATCTTTGAGGTCCAAAGGAAAAGTAAAGGATAAAATCGGCATGCCACAT
GGTAGTGCGGAGAACAGGAACTTGAGCACAAAATGTCACCGAACCAGTGGCCTGCATGGT
GATTGTTCTAATAAACAGATATCAAAGACTGCAACACTGAAAGCTACAGAGAAAGACATG
ATAATTGCAAAAGGTGCAGGGTTAGTTAGTGAGAAGCCAAAGTCTACCAGTCCAAACTCT
GTAAGGAATGACTCGCGGAGAAAGGTAGAGTCACGCATTGCTTCTAGGGGTAACAACTCA
GGCATCATTTCCATCTCTTCTAATTCACCGAGAAAGGCTGTCCTCGCTTTGCTGAATGGT
CATACTAAAGGATCAGATAGTGTTGTTCTGGGATCTCCAACTGGTTCTTGTCCTAAGAGA
GACTATCGTAGGGACTGCCAAAATATTTCTTCAGAAAGGGAATTGGTCTTGAGTGAAGCT
TTACAAGGCATATCAAGTCTGGAAAGTGCAGAATCAGTGTGCTTTAATCGAAATGAGTTG
AGAAACAGAGAAATTCTGGACGACAGAGTAATGTCTTCATTGTTTCGAAAGACGAGTGCT
ATCAATGTAATGGAAGAATCTCCAAGTGATGAATTTCTATGGCAGTGTAACTTTCTGGAC
AGTCTGACTTTTGGCTTCAGAGAGGTTCCTAGAAGTGGTAAATTGCGTGAAACTCATAAA
AAGCATGAGGTTACTACAAATGCTAGCGATCCATCTTATTATGCAGATGATGAGTGCTTT
TCTGGGAGCCTGCTCAAAACTGCAGCATCAGAAGCTGGATTCAGAGACCGACGCCGCTCG
GAGAATTGCACAATGCAACAAGATGGAACTAACAAAAGAAACTCCAGGTGCTCTGAAACT
AATTTTGGCCAAGACAGCAGCAACCTGATACACCCTGGAGAGGTTGCAGCAACTGTTGAG
CTGCTACTAACAAACGTTCGCCGGTCTACTTCTACTACTCCTCCACGAAGAAGAAGAAGA
AGAAGAAGAACGGGTTCAGCTTCAACGCCGGCGTCGTCAAGGCCACAGAAGGGGAGAAGA
GCAGGAGCCCGCTGGGAAGCCTCGCGTTCGATTCCGTCATGGAGTGCTTGGACTCGCTGT
TCACCCAGTTCTGCGACTCAGGATACAGGTCGTTCTCGAGGGTTCCCCTGATCTGCCCCG
AGGAGAGGCTGGCTGCTCAGGTGGACAGGGAGATCGCGAGGTGCAGCGGCATGGCCGGGA
AGGAGGTGGATGAGCTGATCGCGAGCGACGTCCAGCACTCGGGGGTGGAGATCGGCGTGG
ATGTCCTGCACGAGGCGTTTGAGATTGGTGCCCAGATCGAACGGGATCTGCTCCAAGAGC
TGGTGGCCGAGATCGGGATGGATATGTTGAGGCGTTTGTGACGTGATGATGATGATTTCG
TAGCAATATGGTGAA

consensusID : consensus_5844#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 608
fasta sequence 
                              [CAAGTCTGGAAAGTGCAGAATCAGTGTGCTTTAATCGAANTGAGTTGAGAANCAGAGAAATTCTGGNCGACAGAGTAATGTCTTCATTGTTTCGAAAGACGAGTGCCTANCAATGTAATGGAAGAATCTCCAAGTGATGAATTTCTATGGCAGTGTAACTTTCTGGACAGTCTGACTTTTGGCTTCAGAGAGGTTCCTAGAAGTGGTAAATTGCGTGAAACTCATAAAAAGCATGAGGTTACTACAAATGCTAGCGATCCATCTTATTATGCAGATGATGAGTGCTTTTCTGGGAGCCTGCTCAAAACTGCAGCATCAGAAGCTGGATTCAGAGACCGACGCCGCTCGGAGAATTGCACAATGCAACAAGATGGAACTAACAAAAGAAACTCCAGGTGCTCTGAAACTAATTTTGGCCAAGACAGCAGCAACCTGATACACCCTGGAGAGGTTGCAGCAACTGTTGAGCTGCTACTAACAAACGTTCGCCGGTCTACTTCTACTACTCCTCCACGGACATCAAAGGCACCATTCAAGGCGTTCCTTGTCAAGANAANCGAGTCTGCTCTGACCACCGTGACCACCACAAGCTCCACGAAGAAGAAAAA]

[+] EMBL AU093861             [CAAGTCTGGAAAGTGCAGAATCAGTGTGCTTTAATCGAANTGAGTTGAGAANCAGAGAAATTCTGGNCGACAGAGTAATGTCTTCATTGTTTCGAAAGACGAGTGCCTANCAATGTAATGGAAGAATCTCCAAGTGATGAATTTCTATGGCAGTGTAACTTTCTGGACAGTCTGACTTTTGGCTTCAGAGAGGTTCCTAGAAGTGGTAAATTGCGTGAAACTCATAAAAAGCATGAGGTTACTACAAATGCTAGCGATCCATCTTATTATGCAGATGATGAGTGCTTTTCTGGGAGCCTGCTCAAAACTGCAGCATCAGAAGCTGGATTCAGAGACCGACGCCGCTCGGAGAATTGCACAATGCAACAAGATGGAACTAACAAAAGAAACTCCAGGTGCTCTGAAACTAATTTTGGCCAAGACAGCAGCAACCTGATACACCCTGGAGAGGTTGCAGCAACTGTTGAGCTGCTACTAACAAACGTTCGCCGGTCTACTTCTACTACTCCTCCACGGACATCAAAGGCACCATTCAAGGCGTTCCTTGTCAAGANAANCGAGTCTGCTCTGACCACCGTGACCACCACAAGCTCCACGAAGAAGAAAAA]




>consensus_5844#1
CAAGTCTGGAAAGTGCAGAATCAGTGTGCTTTAATCGAANTGAGTTGAGAANCAGAGAAA
TTCTGGNCGACAGAGTAATGTCTTCATTGTTTCGAAAGACGAGTGCCTANCAATGTAATG
GAAGAATCTCCAAGTGATGAATTTCTATGGCAGTGTAACTTTCTGGACAGTCTGACTTTT
GGCTTCAGAGAGGTTCCTAGAAGTGGTAAATTGCGTGAAACTCATAAAAAGCATGAGGTT
ACTACAAATGCTAGCGATCCATCTTATTATGCAGATGATGAGTGCTTTTCTGGGAGCCTG
CTCAAAACTGCAGCATCAGAAGCTGGATTCAGAGACCGACGCCGCTCGGAGAATTGCACA
ATGCAACAAGATGGAACTAACAAAAGAAACTCCAGGTGCTCTGAAACTAATTTTGGCCAA
GACAGCAGCAACCTGATACACCCTGGAGAGGTTGCAGCAACTGTTGAGCTGCTACTAACA
AACGTTCGCCGGTCTACTTCTACTACTCCTCCACGGACATCAAAGGCACCATTCAAGGCG
TTCCTTGTCAAGANAANCGAGTCTGCTCTGACCACCGTGACCACCACAAGCTCCACGAAG
AAGAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5844#0      TTTTNCTCCCGGACCCCCTCCTCCCCAGTCTCCAACTCCACCATTTGGCTCATCCAGTCA 60
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      TCGCCCACTTGCTCTAGATTCATCCCCAAATATTTNNTTCTCAAGGTTTATTATAGCATT 120
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      TNATTTTTAAGAAGAGTTCACAAACAGGAGTAGATACAAGAACATTCAGGATGAGTGTTG 180
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      ATCCATTCCGGTTCTATGTGTAGGAAGAGGAATAATGGCATGCATTAGTCATGTCTTGAG 240
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CAAGAGTTGGAGTGCTGCTGCCACAGTAGTCTTCTCCTTTTTGTNCTCTAGCATTTGGCC 300
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      ATAAGCCATAGTTCTTTCTCGAGCTGTTGTTNCTGCAAAGGCATTGTCGCAAAGTCATGA 360
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      NGAATTTTGATGGTGGCAAATTAATGCCTATCCGGAGAAAGAGTTGAAGCGACTGGNTTT 420
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CCAGGATTTGTTGCATTTATTCGCTCATAAGAAACGGCAAGAGAGAGAGAGAGAGATAGA 480
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GAGAGGGGAAGCAAGAAGAGGCTTTGAAAGATTTTTGAGTTTGAATTTCTTGTTCTTGTG 540
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GGCGTGTGCGTGTGGAGCGGTGGAGGCATGAAAGGCGGCAGCTCCGCCACCGCGGCGAGC 600
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GGCGGCGGCGGCAACAGCCTGGCGATCGTCGAGCGGCAGAAGCCGGCGACGTCGTGCGTG 660
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GCGTCGCTGTTCCAGATGCTCGCCAAGAAGAAGCTCTTCTCCTCGTCCTCCAAGAAGACC 720
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      AAGCTGCTTCCCCCAGTGCGCACACAGAAGTTCTCGCCTGGGAGACCACCTGCCGGCGGC 780
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GAGAAGACGCCGGCGGCCAAGATGAGGACTCTGCTGCTTGATGCTCCATACTATCCAAAT 840
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GAAGTTACCACTCGCTTGCCACCTCCTGGCCAAGACAACAAAAGCAGTGAAATGTGCACA 900
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CCGGGTGTGGTAGCCAGGCTAATGGGGCTCAGCGCAATGCCAGCCACCAGCCATCAAAAG 960
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GCAGTAAAAACCATGGATGCCTCCGAGCTTGGTGGTCACCGGAGTGAATGCTCCTATGGA 1020
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      AGCATATACAACTCGCATCAGAGGCAACAAAAGCCAGGGCATATCAGAGATGGCCGGCAT 1080
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GACAATGGCAATCAGCTCGATGCAGATGCGCAGCCGGTGTGGTCACGGAAGCATGCAGCA 1140
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CACAAGTTAGCCTCACCTATTAAGAGTCCAAGATCAGTTTCAAGCAGGAACAAGGTTAGG 1200
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CTGATTGAAGCAGCAGTCAAGGTCCTGGAACCCGGTTTACAATCCAGGCACCACCATCAG 1260
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GCTCGGAGGCAAGCGCGCCTCGAGTATAGATGCAACAGCAGTGATGTGCAGAGTGCTGCT 1320
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GAAGCCATGCACGATTTCTCCGATCAATTCGCAAGAGAAATGTGTGATGTTGATGCATCA 1380
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      AGGTCAGGTGCTCAAAATGTAGGAGCCACCTCTCTGCACAATTCTACTTCCAATCAGTGG 1440
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      TCCGAAGAGGATACTATGAGGAATGTTTCTGTTAGGAGGCCAAACCAGAACATATCATGT 1500
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CAAGCACAATCTGAGGGAAACCATAAGGGTCAGAGGAACGGATTTAAGGACAGTGGTCAG 1560
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      AGAACATCAGATGATGTCCTTGTTTCAAGTCAAGGTGTCCAAAAAATACAGCCGAAAAAC 1620
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      ATATCCCGAGAGAATGTTGATTGTAGACCTCTTAAACAGAACAATCTGAAGCAGAATGCA 1680
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      TTGCCTGAAACTTATAGAGCAGCAGATACAGGGCATATGGTCCAAAGGCAGAAACATAGA 1740
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GCTAAGGAGCAAAATGTGGCAAACACAGCCAATGACTTTGTCTGTTCAAACAGAGGTATG 1800
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      AACAACAGTGCATCTTTGAGGTCCAAAGGAAAAGTAAAGGATAAAATCGGCATGCCACAT 1860
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GGTAGTGCGGAGAACAGGAACTTGAGCACAAAATGTCACCGAACCAGTGGCCTGCATGGT 1920
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GATTGTTCTAATAAACAGATATCAAAGACTGCAACACTGAAAGCTACAGAGAAAGACATG 1980
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      ATAATTGCAAAAGGTGCAGGGTTAGTTAGTGAGAAGCCAAAGTCTACCAGTCCAAACTCT 2040
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GTAAGGAATGACTCGCGGAGAAAGGTAGAGTCACGCATTGCTTCTAGGGGTAACAACTCA 2100
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GGCATCATTTCCATCTCTTCTAATTCACCGAGAAAGGCTGTCCTCGCTTTGCTGAATGGT 2160
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CATACTAAAGGATCAGATAGTGTTGTTCTGGGATCTCCAACTGGTTCTTGTCCTAAGAGA 2220
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GACTATCGTAGGGACTGCCAAAATATTTCTTCAGAAAGGGAATTGGTCTTGAGTGAAGCT 2280
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      TTACAAGGCATATCAAGTCTGGAAAGTGCAGAATCAGTGTGCTTTAATCGAAATGAGTTG 2340
consensus_5844#1      -------------CAAGTCTGGAAAGTGCAGAATCAGTGTGCTTTAATCGAANTGAGTTG 47
                                   *************************************** *******

consensus_5844#0      AGAAACAGAGAAATTCTGGACGACAGAGTAATGTCTTCATTGTTTCGAAAGACGAGTGC- 2399
consensus_5844#1      AGAANCAGAGAAATTCTGGNCGACAGAGTAATGTCTTCATTGTTTCGAAAGACGAGTGCC 107
                      **** ************** *************************************** 

consensus_5844#0      TATCAATGTAATGGAAGAATCTCCAAGTGATGAATTTCTATGGCAGTGTAACTTTCTGGA 2459
consensus_5844#1      TANCAATGTAATGGAAGAATCTCCAAGTGATGAATTTCTATGGCAGTGTAACTTTCTGGA 167
                      ** *********************************************************

consensus_5844#0      CAGTCTGACTTTTGGCTTCAGAGAGGTTCCTAGAAGTGGTAAATTGCGTGAAACTCATAA 2519
consensus_5844#1      CAGTCTGACTTTTGGCTTCAGAGAGGTTCCTAGAAGTGGTAAATTGCGTGAAACTCATAA 227
                      ************************************************************

consensus_5844#0      AAAGCATGAGGTTACTACAAATGCTAGCGATCCATCTTATTATGCAGATGATGAGTGCTT 2579
consensus_5844#1      AAAGCATGAGGTTACTACAAATGCTAGCGATCCATCTTATTATGCAGATGATGAGTGCTT 287
                      ************************************************************

consensus_5844#0      TTCTGGGAGCCTGCTCAAAACTGCAGCATCAGAAGCTGGATTCAGAGACCGACGCCGCTC 2639
consensus_5844#1      TTCTGGGAGCCTGCTCAAAACTGCAGCATCAGAAGCTGGATTCAGAGACCGACGCCGCTC 347
                      ************************************************************

consensus_5844#0      GGAGAATTGCACAATGCAACAAGATGGAACTAACAAAAGAAACTCCAGGTGCTCTGAAAC 2699
consensus_5844#1      GGAGAATTGCACAATGCAACAAGATGGAACTAACAAAAGAAACTCCAGGTGCTCTGAAAC 407
                      ************************************************************

consensus_5844#0      TAATTTTGGCCAAGACAGCAGCAACCTGATACACCCTGGAGAGGTTGCAGCAACTGTTGA 2759
consensus_5844#1      TAATTTTGGCCAAGACAGCAGCAACCTGATACACCCTGGAGAGGTTGCAGCAACTGTTGA 467
                      ************************************************************

consensus_5844#0      GCTGCTACTAACAAACGTTCGCCGGTCTACTTCTACTACTCCTCCACGAAGAAGAAGAAG 2819
consensus_5844#1      GCTGCTACTAACAAACGTTCGCCGGTCTACTTCTACTACTCCTCCACGGACATCAAAGGC 527
                      ************************************************ * *  **    

consensus_5844#0      AAGAAGAAGAACGGGTTCAGCTTCAACGCCGGCGTC-GTCAAGGCCACAGAAGGGGAGAA 2878
consensus_5844#1      ACCATTCAAGGCGTTCCTTGTCAAGANAANCGAGTCTGCTCTGACCACCGTGACCACCAC 587
                      *  *   *   **      *     *     * *** *    * **** *        * 

consensus_5844#0      GAGCAGGAGCCCGCTGGGAAGCCTCGCGTTCGATTCCGTCATGGAGTGCTTGGACTCGCT 2938
consensus_5844#1      AAGCTCCACGAAGAAGAAAAA--------------------------------------- 608
                       ***   *    *  *  **                                        

consensus_5844#0      GTTCACCCAGTTCTGCGACTCAGGATACAGGTCGTTCTCGAGGGTTCCCCTGATCTGCCC 2998
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CGAGGAGAGGCTGGCTGCTCAGGTGGACAGGGAGATCGCGAGGTGCAGCGGCATGGCCGG 3058
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GAAGGAGGTGGATGAGCTGATCGCGAGCGACGTCCAGCACTCGGGGGTGGAGATCGGCGT 3118
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GGATGTCCTGCACGAGGCGTTTGAGATTGGTGCCCAGATCGAACGGGATCTGCTCCAAGA 3178
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      GCTGGTGGCCGAGATCGGGATGGATATGTTGAGGCGTTTGTGACGTGATGATGATGATTT 3238
consensus_5844#1      ------------------------------------------------------------
                                                                                  

consensus_5844#0      CGTAGCAATATGGTGAA 3255
consensus_5844#1      -----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)