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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5845 cluster # 5845       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5845#0 length = 728 sequences # 3  

consensusID : consensus_5845#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 728
fasta sequence
                              [TAATACAGTACTATACTACTCTTCTTCTTCCTTCCAACCTCCTCAACTCCAAACCAACACCTCCCCAATAAATCCATCCAACCCCATCACACAATCACCACCATCTTCTCCATCTCGTTTTGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGCCATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCTCTGCATCTCAGCTACTCATGA-GGCTGCGAGAACAGCATCAGGCCAACCGA-TCCAAGAACAAGAACAAGAACAGCATGGCAAGGTGGAGGAGGAGACGATGGCGGCGAGCTTCGCGGCGGTGGAAGAGCAG-TGTGGAGGGGAAGAA-GGAGAGGAGGAGGAGTGCTTGATGAGGAGGACGCTGGTGGCGCACACAGACTACATCTACACCCAGGGAAATCACAACTGATAGTTAGTACAATCTACTACTATATGGTAGCCTAGCTCATGCAGCAGCGAAAATTGGATGAATTTACAATTCGCTTTGATTTCTGTTTGCTCCAATCAGTTCACTTTCACTGTGACTGATTGATGTCATCTTATCTTATCCAATCATTAATTGCTGCTGCTGACTTCTCTCTGTATGATCAATGGATCAAAATGCGTGTCAACTTCAGGGTTTTTTTTCCAGATAATGTCTCCTCAGTTATATATAGTATATCATATCACAG]

[+] EMBL OSS3123A             [TAATACAGTACTATACTACTCTTCTTCTTCCTTCCAACCTCCTCAACTCCAAACCAACACCTCCCCAATAAATCCATCCAACCCCATCACACAATCACCACCATCTTCTCCATCTCGTTTTGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGCCATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCTCTGCATCTCAGCTACTCATGAGGGCTGCGAGAACAGCATCAGGCCAACCGATTCCAAGgaa                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK062316             [          CTATACTACTCTTCTTCTTCCTTCCAACCTCCTCAACTCCAAACCAACACCTCCCCAATAAATCCATCCAACCCCATCACACAATCACCACCATCTTCTCCATCTCGTTTTGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGCCATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCTCTGCATCTCAGCTACTCATGA GGCTGCGAGAACAGCATCAGGCCAACCGA TCCAAGAACAAGAACAAGAACAGCATGGCAAGGTGGAGGAGGAGACGATGGCGGCGAGCTTCGCGGCGGTGGAAGAGCAG TGTGGAGGGGAAGAA GGAGAGGAGGAGGAGTGCTTGATGAGGAGGACGCTGGTGGCGCACACAGACTACATCTACACCCAGGGAAATCACAACTGATAGTTAGTACAATCTACTACTATATGGTAGCCTAGCTCATGCAGCAGCGAAAATTGGATGAATTTACAATTCGCTTTGATTTCTGTTTGCTCCAATCAGTTCACTTTCACTGTGACTGATTGATGTCATCTTATCTTATCCAATCATTAATTGCTGCTGCTGACTTCTCTCTGTATGATCAATGGATCAAAATGCGTGTCAACTTCAGGGTTTTTTTTCCAGATAATGTCTCCTCAGTTATATATAGTATATCATATCACAG]
[+] EMBL OSC0041              [                                                                                                                       TTGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGCCATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCTCTGCATCTCAGCTACTCATGA GGCTGCGAGAACAGCATCAGGCCAACCGA TCCAAGAACAAGAACAAGAACAGCATGGCAAGGTGGAGGAGGAGACGATGGCGGCGAGCTTCGCGGCGGTGGAAGNGCAGTTTTNGAGGGGAAGAAGGGAGAGGAGG                                                                                                                                                                                                                                                                                                                                             ]


>consensus_5845#0 TAATACAGTACTATACTACTCTTCTTCTTCCTTCCAACCTCCTCAACTCCAAACCAACAC CTCCCCAATAAATCCATCCAACCCCATCACACAATCACCACCATCTTCTCCATCTCGTTT TGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGC CATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCT CTGCATCTCAGCTACTCATGAGGCTGCGAGAACAGCATCAGGCCAACCGATCCAAGAACA AGAACAAGAACAGCATGGCAAGGTGGAGGAGGAGACGATGGCGGCGAGCTTCGCGGCGGT GGAAGAGCAGTGTGGAGGGGAAGAAGGAGAGGAGGAGGAGTGCTTGATGAGGAGGACGCT GGTGGCGCACACAGACTACATCTACACCCAGGGAAATCACAACTGATAGTTAGTACAATC TACTACTATATGGTAGCCTAGCTCATGCAGCAGCGAAAATTGGATGAATTTACAATTCGC TTTGATTTCTGTTTGCTCCAATCAGTTCACTTTCACTGTGACTGATTGATGTCATCTTAT CTTATCCAATCATTAATTGCTGCTGCTGACTTCTCTCTGTATGATCAATGGATCAAAATG CGTGTCAACTTCAGGGTTTTTTTTCCAGATAATGTCTCCTCAGTTATATATAGTATATCA TATCACAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)