cluster # 5852

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Oryza sativa
cluster # 5852 cluster # 5852 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5852#0 length = 842 sequences # 3

consensusID : consensus_5852#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 842
fasta sequence

                              [TCTCCCCGTCCATCCCCTCGATCGCCCTCGACCACCCTCGCCCGCCGCCTCCGCCGATCCCCATCCGTCGAGCACCGCCGCCGCCGCCGCCGCCGCCGCCGGCGTCCCGCCACATCCCCGCCTTGCTGCCCGATTATATCATTATTACACCTTGCTGCGGCTTTTATTGATTCGTGAATCGTGATGGCGTGCCGGGGCTTCTTCGAATGCCTACTGAAGCTGCTCAACTTTGTCCTCACGGTCGCCGGCCTCGCCATGGTCGGATATGGGATTTACCTGCTCGTCGAGTGGATGAGGATTTCCGGCGGCGGCGGCGGGGCACCACCGTCGCCAGCGCCGCCTGCTGAGTTGCTTATGTTTGGCCGCCCGATGCTCACGGCTGTTGCCCTAGGTGACGGTGGCAGTTTCTTCGACAAGCTCCCTAAAGCATGGTTCATCTATTTGTTCATTGGTGTTGGTGCAATTATCTTTGTGATCTCTCTGTTTGGTTGCATTGGAGCTGCAACAAGGAACACCTGCTGCTTGTGTTGTTACGCTTTCTTGGTCATATTGTTGATCCTTGTTGAGGCTGGAGCTGCTGCATTCATATTCTTCGACGAAAGCTGGAAAGACGTAATTCCGGTGGACAAGACTGAGAATTTTGATGTAATGTATGACTTTCTCAAGGAAAACTGGGAGATTGCAAGATGGGTTGCTCTTGGTAGTGTCATTTTCGAGGTATTGCTTTTCCTTTTAGCACTGGTTGTCAGGGCAATGAACAAACCTGCTGAATATGACAGCGATGATGAGATCATCGCAACTTCTAGAAGCACTAGCATCCGGCAGCCACTAATTCATTCACA]

[+] EMBL AK101411             [TCTCCCCGTCCATCCCCTCGATCGCCCTCGACCACCCTCGCCCGCCGCCTCCGCCGATCCCCATCCGTCGAGCACCGCCGCCGCCGCCGCCGCCGCCGCCGGCGTCCCGCCACATCCCCGCCTTGCTGCCCGATTATATCATTATTACACCTTGCTGCGGCTTTTATTGATTCGTGAATCGTGATGGCGTGCCGGGGCTTCTTCGAATGCCTACTGAAGCTGCTCAACTTTGTCCTCACGGTCGCCGGCCTCGCCATGGTCGGATATGGGATTTACCTGCTCGTCGAGTGGATGAGGATTTCCGGCGGCGGCGGCGGGGCACCACCGTCGCCAGCGCCGCCTGCTGAGTTGCTTATGTTTGGCCGCCCGATGCTCACGGCTGTTGCCCTAGGTGACGGTGGCAGTTTCTTCGACAAGCTCCCTAAAGCATGGTTCATCTATTTGTTCATTGGTGTTGGTGCAATTATCTTTGTGATCTCTCTGTTTGGTTGCATTGGAGCTGCAACAAGGAACACCTGCTGCTTGTGTTGTTACGCTTTCTTGGTCATATTGTTGATCCTTGTTGAGGCTGGAGCTGCTGCATTCATATTCTTCGACGAAAGCTGGAAAGACGTAATTCCGGTGGACAAGACTGAGAATTTTGATGTAATGTATGACTTTCTCAAGGAAAACTGGGAGATTGCAAGATGGGTTGCTCTTGGTAGTGTCATTTTCGAGGTATTGCTTTTCCTTTTAGCACTGGTTGTCAGGGCAATGAACAAACCTGCTGAATATGACAGCGATGATGAGATCATCGCAACTTCTAGAAGCACTAGCATCCGGCAGCCACTAATTCATTCAC ]
[+] EMBL CB658945             [                         CCTCTACCCCCCTCGCCCGCCGCCTCCGCCGATCCCCATCCGTCGAGCACCGCCGCCGCCGCCGCCGCCGCCGCCGGCGTCCCGCCACATCCCCGCCTTGCTGCCCGATTATATCATTATTACACCTTGCTGCGGCTTTTATTGATTCGTGAATCGTGATGGCGTGCCGGGGCTTCTTCGAATGCCTACTGAAGCTGCTCAACTTTGTCCTCACGGTCGCCGGCCTCGCCATGGTCGGATATGGGATTTACCTGCTCGTCGAGTGGATGAGGATTTCCGGCGGCGGCGGCGGGGCACCACCGTCGCCAGCGCCGCCTGCTGAGTTGCTTATGTTTGGCCGCCCGATGCTCACGGCTGTTGCCCTAGGTGACGGTGGCAGTTTCTTCGACAAGCTCCCTAAAGCATGGTTCATCTATTTGTTCATTGGTGTTGGTGCAATTATCTTTGTGATCTCTCTGTTTGGTTGCATTGGAGCTGCAACAAGGAACACCTGCTGCTTGTGTTGTTACGCTTTCTTGGTCATATTGTTGATCCTTGTTGAGGCTGGAGCTGCTGCATTCATATTCTTCGACGAAAGCTGGAAAGACGTAATTCCGGTGGACAAGACTGAGAATTTTGATGTAATGTATGACTTTCTCAAGGAAAACTGGGAGATTGCAAGATGGGTTGCTCTTGGTAGTGTCATTTTCGAGGTATTGCTTTTCCTTTTAGCACTGGTTGTCAGGGCAATGAACAAACCTGCTGAATATGACAGCGATGATGAGATCATCGCAACTTCTAGAAGCACTAGCATCCGGCAGCCA              ]
[-] EMBL CB658946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTCCGGTGGACAAGACTGAGAATTTTGATGTAATGTATGACTTTCTCAAGGAAAACTGGGAGATTGCAAGATGGGTTGCTCTTGGTAGTGTCATTTTCGAGGTATTGCTTTTCCTTTTAGCACTGGTTGTCAGGGCAATGAACAAACCTGCTGAATATGACAGCGATGATGAGATCATCGCAACTTCTAGAAGCACTAGCATCCGGCAGCCATTAATTCATTCACA]




>consensus_5852#0
TCTCCCCGTCCATCCCCTCGATCGCCCTCGACCACCCTCGCCCGCCGCCTCCGCCGATCC
CCATCCGTCGAGCACCGCCGCCGCCGCCGCCGCCGCCGCCGGCGTCCCGCCACATCCCCG
CCTTGCTGCCCGATTATATCATTATTACACCTTGCTGCGGCTTTTATTGATTCGTGAATC
GTGATGGCGTGCCGGGGCTTCTTCGAATGCCTACTGAAGCTGCTCAACTTTGTCCTCACG
GTCGCCGGCCTCGCCATGGTCGGATATGGGATTTACCTGCTCGTCGAGTGGATGAGGATT
TCCGGCGGCGGCGGCGGGGCACCACCGTCGCCAGCGCCGCCTGCTGAGTTGCTTATGTTT
GGCCGCCCGATGCTCACGGCTGTTGCCCTAGGTGACGGTGGCAGTTTCTTCGACAAGCTC
CCTAAAGCATGGTTCATCTATTTGTTCATTGGTGTTGGTGCAATTATCTTTGTGATCTCT
CTGTTTGGTTGCATTGGAGCTGCAACAAGGAACACCTGCTGCTTGTGTTGTTACGCTTTC
TTGGTCATATTGTTGATCCTTGTTGAGGCTGGAGCTGCTGCATTCATATTCTTCGACGAA
AGCTGGAAAGACGTAATTCCGGTGGACAAGACTGAGAATTTTGATGTAATGTATGACTTT
CTCAAGGAAAACTGGGAGATTGCAAGATGGGTTGCTCTTGGTAGTGTCATTTTCGAGGTA
TTGCTTTTCCTTTTAGCACTGGTTGTCAGGGCAATGAACAAACCTGCTGAATATGACAGC
GATGATGAGATCATCGCAACTTCTAGAAGCACTAGCATCCGGCAGCCACTAATTCATTCA
CA

clustalw multiple alignements is not computed in this case