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Oryza sativa
cluster # 5858 cluster # 5858       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5858#0 length = 2695 sequences # 2  
consensus_5858#1 length = 415 sequences # 1  

consensusID : consensus_5858#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2695
fasta sequence
                              [CTGTTGCTCCTCTCCTCTCCTCTCCTCTCCTCTGCTCTCCGAGTGAAACTTGCTTCTAGTACCAGCTGCGAGCTTGTTATGTTCCGTTTCTTCCAGCTTTGGTGCTCTCTCAACTCTGAAGAAGAAGAGGTTTTCTCTGTCTAGGAAGGAGAGATTGTGCAGCGAGGTTTCTTTCTCTCACTAGGAGGTTTGAGGTTGCTGGGAGTGGTTACGAAGCTAATTAGGAGCTTTGCCGCTTTGGTTGAGTTTCTTGGTGAGAGGTGAGGAGAGCGTGAGCGAGCTCGCTCTCAGTCTCACGCCTTTTGTGTTGTGTTGTGGAGGAGGAGAAAGGAGGCGGTTTTTTGTTGTTTCTGTCAGCGTTTTCTCGTCAGCTGCAGTTTCTTGTCAGTTTCCATGGATGAGTAGCATGAACAAGACGCGAGCAGAAAATGGCATCTTCAACCAGTGGAGGAACTCGAGCTCACCCATTTGGTCCTGTTCCTTGAGCATTCTATCTCCCAAAGGAGCAATCGCTTCTCCTCTTTCCATGGAGATGATGGCGAGCAAGAACCCTACCAAAACCCTCCTCCTCCTGCTCCTCCTCGTCTTCTTCCTCTCGCTGGCTTGCTCCCAGCCGCTCCACTCGGAGCCCATGTCCACCACCACCACCGCCACCCAGCCCGCGCCACCGCCTCCCCCGCCGCAATCCAAGATTCCCCACGCGGAGGCCGGCGGCGCCGCCCGCCTCCGCCGCATCGTGCTCGGCGTCCTCTTCGGCTCCCTCACTGGCTTCCTCCTCTCCCTCGCCTTCCTCTACGCCATCCGCGTCGCCATCCTCCACGCCAAGTACGCCCCGGCAATCGTCAGGGGCCCCGTCTCCTTCACCCCGCAGATTTCCCCCAAGAACCTCCACTCCGCGCTCCCCTCCGCGCAGCCGCTCGCCCATGGCCCCAACGGCAAGTATTACAAGCTGGTTCTTGACAACGATGTCACCGTCGCCGTCAAGCGGCTCGAGGCTAGCCGCCCTGAGGCCTCGCCGTCGTCGATGCCCAATGTTTCCAAGTCTGACATGAGGAGGGTGCAGAGGCAGCTGGAGTTGCTAGCTCGGGTGAGGCACCAGAATGTGATGGGATTGAAGGCGTATGTCCGGGAAGCCGACCGGCTATCGCTGGCGTACGATTTCGTGCCCGGGGGCAGCCTTGAGGATGTGATGAAGAGGGTGAGGTCTCTGCAGGTGAACCTCAATTGGGATGCAAGGAACAGGATTGCGATTGGAGTGGCCAAGGGATTGAGGTACTTGCATTTTGAGTGCACCCCCCGGATACTGCATTGCAGCCTCAAGCCGTCGAATGTGATGCTAGATGAAGATTTCGAACCGAGATTGGCAGATTGCGGCGTTTCAAGGCTAATTGCATCAGGTTCAGCTGATCCAGAACTGGCCAGCAGCCTTTATTCTGCCCCAGAGTGCTACCAAAGCAGCAGATACACAGATAAGAGCGATGTCTACAGTTTTGGCATGATCCTTGGCGTGTTGCTAACTGGGAGAGACCCAACAGATCATTTTTTCTCGGGAGAAACCGGGCGCGGTGGATTAGCTAGATGGCTTCGGCACATGCAACAATCTGGTGACGCAAAAGACGCACTGGATAGTAGTGTCTTAGGAGAGGAAGGGGAAGAAGATGAGATGGTGATGGCTGTTAGGGTTGCTATCATCTGTCTCTCAGATTTACCAGCCGATCGGCCATCCAGTGATGAACTAGTCCCCATGCTCACCCAGCTCCACAGCTTATGATCTCCGTCGAACGCTTCTTCGTAAAGTACTAATCTCTGGATGTTCTTCATCCATGGCACAGTTTCTGAATCATGCTGGAGGGTCAAAACTCAAAACCCTGGATGCACAAACTAGTGTAGCTTTCAGTGTATTCCCTTGGAAGAGCCCATGCTAAATGGCCCACATGGGAGGGGAGCTAACAGTTTTCAGAGGCCAATGTAGGAAGGAAATCTGGTAGGTCTTACTAGTTCAGTTGTCAGTTATGTTGTGTGTTGCAGCTACATGCTGGTGGTTGAGTGAGCCTCATTGTCATGTGATGCTTCTTTGCCCTTACATGATTTGGAGGAGGTAGGCAAGGAAGATGTGAATATTGTGGTGTCTTTGTAGAGAGAAAGCTGTCTTTTTCTTGGATCTATTGCAGACCTGCAGTGGTGGTGGTATGATGATGTGCTTCTGCATTGACCGATCCATCAATTCTATCATGTACTAGCAGTACATCGGCTCCACCCCTTGCCCATGACTTGCTGCAGGAGTGTCGGGGTCCAAACACCATTTTGATGGCATTTTTCTCTTCAGTTCACATGCTCGCCTGTCCAACAGCATTTTGATGGCCATGTATCATGCACAGTCACATTTTGTGTAAAATGTAAGGGCCTGTTTGGAGAGTTTTTGGCAGCTGCGGATTCTGAGAAATCATAGTTGTAGAATAGTTTTCCCAACTTCTCACAATCTGAAAGTTGCTTTTCAGAATCTAAAACTCCCCCAAATTGGCTCTGTAAATCTCCTTTGGCATGGGAAAATTTCATTGGAAACCTAGGAGTACTCTTCCTATGCTTAGCTTAGCATGTCTGCATGTGTAACTTGTGTTGTTGAGCATGAGGAGAGGAGCCTACTACTAGTATGTTGACAAGAATCCAATGTGAAATGAAATTGTGAACCTGAACA]

[+] EMBL AK068802             [CTGTTGCTCCTCTCCTCTCCTCTCCTCTCCTCTGCTCTCCGAGTGAAACTTGCTTCTAGTACCAGCTGCGAGCTTGTTATGTTCCGTTTCTTCCAGCTTTGGTGCTCTCTCAACTCTGAAGAAGAAGAGGTTTTCTCTGTCTAGGAAGGAGAGATTGTGCAGCGAGGTTTCTTTCTCTCACTAGGAGGTTTGAGGTTGCTGGGAGTGGTTACGAAGCTAATTAGGAGCTTTGCCGCTTTGGTTGAGTTTCTTGGTGAGAGGTGAGGAGAGCGTGAGCGAGCTCGCTCTCAGTCTCACGCCTTTTGTGTTGTGTTGTGGAGGAGGAGAAAGGAGGCGGTTTTTTGTTGTTTCTGTCAGCGTTTTCTCGTCAGCTGCAGTTTCTTGTCAGTTTCCATGGATGAGTAGCATGAACAAGACGCGAGCAGAAAATGGCATCTTCAACCAGTGGAGGAACTCGAGCTCACCCATTTGGTCCTGTTCCTTGAGCATTCTATCTCCCAAAGGAGCAATCGCTTCTCCTCTTTCCATGGAGATGATGGCGAGCAAGAACCCTACCAAAACCCTCCTCCTCCTGCTCCTCCTCGTCTTCTTCCTCTCGCTGGCTTGCTCCCAGCCGCTCCACTCGGAGCCCATGTCCACCACCACCACCGCCACCCAGCCCGCGCCACCGCCTCCCCCGCCGCAATCCAAGATTCCCCACGCGGAGGCCGGCGGCGCCGCCCGCCTCCGCCGCATCGTGCTCGGCGTCCTCTTCGGCTCCCTCACTGGCTTCCTCCTCTCCCTCGCCTTCCTCTACGCCATCCGCGTCGCCATCCTCCACGCCAAGTACGCCCCGGCAATCGTCAGGGGCCCCGTCTCCTTCACCCCGCAGATTTCCCCCAAGAACCTCCACTCCGCGCTCCCCTCCGCGCAGCCGCTCGCCCATGGCCCCAACGGCAAGTATTACAAGCTGGTTCTTGACAACGATGTCACCGTCGCCGTCAAGCGGCTCGAGGCTAGCCGCCCTGAGGCCTCGCCGTCGTCGATGCCCAATGTTTCCAAGTCTGACATGAGGAGGGTGCAGAGGCAGCTGGAGTTGCTAGCTCGGGTGAGGCACCAGAATGTGATGGGATTGAAGGCGTATGTCCGGGAAGCCGACCGGCTATCGCTGGCGTACGATTTCGTGCCCGGGGGCAGCCTTGAGGATGTGATGAAGAGGGTGAGGTCTCTGCAGGTGAACCTCAATTGGGATGCAAGGAACAGGATTGCGATTGGAGTGGCCAAGGGATTGAGGTACTTGCATTTTGAGTGCACCCCCCGGATACTGCATTGCAGCCTCAAGCCGTCGAATGTGATGCTAGATGAAGATTTCGAACCGAGATTGGCAGATTGCGGCGTTTCAAGGCTAATTGCATCAGGTTCAGCTGATCCAGAACTGGCCAGCAGCCTTTATTCTGCCCCAGAGTGCTACCAAAGCAGCAGATACACAGATAAGAGCGATGTCTACAGTTTTGGCATGATCCTTGGCGTGTTGCTAACTGGGAGAGACCCAACAGATCATTTTTTCTCGGGAGAAACCGGGCGCGGTGGATTAGCTAGATGGCTTCGGCACATGCAACAATCTGGTGACGCAAAAGACGCACTGGATAGTAGTGTCTTAGGAGAGGAAGGGGAAGAAGATGAGATGGTGATGGCTGTTAGGGTTGCTATCATCTGTCTCTCAGATTTACCAGCCGATCGGCCATCCAGTGATGAACTAGTCCCCATGCTCACCCAGCTCCACAGCTTATGATCTCCGTCGAACGCTTCTTCGTAAAGTACTAATCTCTGGATGTTCTTCATCCATGGCACAGTTTCTGAATCATGCTGGAGGGTCAAAACTCAAAACCCTGGATGCACAAACTAGTGTAGCTTTCAGTGTATTCCCTTGGAAGAGCCCATGCTAAATGGCCCACATGGGAGGGGAGCTAACAGTTTTCAGAGGCCAATGTAGGAAGGAAATCTGGTAGGTCTTACTAGTTCAGTTGTCAGTTATGTTGTGTGTTGCAGCTACATGCTGGTGGTTGAGTGAGCCTCATTGTCATGTGATGCTTCTTTGCCCTTACATGATTTGGAGGAGGTAGGCAAGGAAGATGTGAATATTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK101312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCACCGCCTCCCCCGCCGCAATCCAAGATTCCCCACGCGGAGGCCGGCGGCGCCGCCCGCCTCCGCCGCATCGTGCTCGGCGTCCTCTTCGGCTCCCTCACTGGCTTCCTCCTCTCCCTCGCCTTCCTCTACGCCATCCGCGTCGCCATCCTCCACGCCAAGTACGCCCCGGCAATCGTCAGGGGCCCCGTCTCCTTCACCCCGCAGATTTCCCCCAAGAACCTCCACTCCGCGCTCCCCTCCGCGCAGCCGCTCGCCCATGGCCCCAACGGCAAGTATTACAAGCTGGTTCTTGACAACGATGTCACCGTCGCCGTCAAGCGGCTCGAGGCTAGCCGCCCTGAGGCCTCGCCGTCGTCGATGCCCAATGTTTCCAAGTCTGACATGAGGAGGGTGCAGAGGCAGCTGGAGTTGCTAGCTCGGGTGAGGCACCAGAATGTGATGGGATTGAAGGCGTATGTCCGGGAAGCCGACCGGCTATCGCTGGCGTACGATTTCGTGCCCGGGGGCAGCCTTGAGGATGTGATGAAGAGGGTGAGGTCTCTGCAGGTGAACCTCAATTGGGATGCAAGGAACAGGATTGCGATTGGAGTGGCCAAGGGATTGAGGTACTTGCATTTTGAGTGCACCCCCCGGATACTGCATTGCAGCCTCAAGCCGTCGAATGTGATGCTAGATGAAGATTTCGAACCGAGATTGGCAGATTGCGGCGTTTCAAGGCTAATTGCATCAGGTTCAGCTGATCCAGAACTGGCCAGCAGCCTTTATTCTGCCCCAGAGTGCTACCAAAGCAGCAGATACACAGATAAGAGCGATGTCTACAGTTTTGGCATGATCCTTGGCGTGTTGCTAACTGGGAGAGACCCAACAGATCATTTTTTCTCGGGAGAAACCGGGCGCGGTGGATTAGCTAGATGGCTTCGGCACATGCAACAATCTGGTGACGCAAAAGACGCACTGGATAGTAGTGTCTTAGGAGAGGAAGGGGAAGAAGATGAGATGGTGATGGCTGTTAGGGTTGCTATCATCTGTCTCTCAGATTTACCAGCCGATCGGCCATCCAGTGATGAACTAGTCCCCATGCTCACCCAGCTCCACAGCTTATGATCTCCGTCGAACGCTTCTTCGTAAAGTACTAATCTCTGGATGTTCTTCATCCATGGCACAGTTTCTGAATCATGCTGGAGGGTCAAAACTCAAAACCCTGGATGCACAAACTAGTGTAGCTTTCAGTGTATTCCCTTGGAAGAGCCCATGCTAAATGGCCCACATGGGAGGGGAGCTAACAGTTTTCAGAGGCCAATGTAGGAAGGAAATCTGGTAGGTCTTACTAGTTCAGTTGTCAGTTATGTTGTGTGTTGCAGCTACATGCTGGTGGTTGAGTGAGCCTCATTGTCATGTGATGCTTCTTTGCCCTTACATGATTTGGAGGAGGTAGGCAAGGAAGATGTGAATATTGTGGTGTCTTTGTAGAGAGAAAGCTGTCTTTTTCTTGGATCTATTGCAGACCTGCAGTGGTGGTGGTATGATGATGTGCTTCTGCATTGACCGATCCATCAATTCTATCATGTACTAGCAGTACATCGGCTCCACCCCTTGCCCATGACTTGCTGCAGGAGTGTCGGGGTCCAAACACCATTTTGATGGCATTTTTCTCTTCAGTTCACATGCTCGCCTGTCCAACAGCATTTTGATGGCCATGTATCATGCACAGTCACATTTTGTGTAAAATGTAAGGGCCTGTTTGGAGAGTTTTTGGCAGCTGCGGATTCTGAGAAATCATAGTTGTAGAATAGTTTTCCCAACTTCTCACAATCTGAAAGTTGCTTTTCAGAATCTAAAACTCCCCCAAATTGGCTCTGTAAATCTCCTTTGGCATGGGAAAATTTCATTGGAAACCTAGGAGTACTCTTCCTATGCTTAGCTTAGCATGTCTGCATGTGTAACTTGTGTTGTTGAGCATGAGGAGAGGAGCCTACTACTAGTATGTTGACAAGAATCCAATGTGAAATGAAATTGTGAACCTGAACA]


>consensus_5858#0 CTGTTGCTCCTCTCCTCTCCTCTCCTCTCCTCTGCTCTCCGAGTGAAACTTGCTTCTAGT ACCAGCTGCGAGCTTGTTATGTTCCGTTTCTTCCAGCTTTGGTGCTCTCTCAACTCTGAA GAAGAAGAGGTTTTCTCTGTCTAGGAAGGAGAGATTGTGCAGCGAGGTTTCTTTCTCTCA CTAGGAGGTTTGAGGTTGCTGGGAGTGGTTACGAAGCTAATTAGGAGCTTTGCCGCTTTG GTTGAGTTTCTTGGTGAGAGGTGAGGAGAGCGTGAGCGAGCTCGCTCTCAGTCTCACGCC TTTTGTGTTGTGTTGTGGAGGAGGAGAAAGGAGGCGGTTTTTTGTTGTTTCTGTCAGCGT TTTCTCGTCAGCTGCAGTTTCTTGTCAGTTTCCATGGATGAGTAGCATGAACAAGACGCG AGCAGAAAATGGCATCTTCAACCAGTGGAGGAACTCGAGCTCACCCATTTGGTCCTGTTC CTTGAGCATTCTATCTCCCAAAGGAGCAATCGCTTCTCCTCTTTCCATGGAGATGATGGC GAGCAAGAACCCTACCAAAACCCTCCTCCTCCTGCTCCTCCTCGTCTTCTTCCTCTCGCT GGCTTGCTCCCAGCCGCTCCACTCGGAGCCCATGTCCACCACCACCACCGCCACCCAGCC CGCGCCACCGCCTCCCCCGCCGCAATCCAAGATTCCCCACGCGGAGGCCGGCGGCGCCGC CCGCCTCCGCCGCATCGTGCTCGGCGTCCTCTTCGGCTCCCTCACTGGCTTCCTCCTCTC CCTCGCCTTCCTCTACGCCATCCGCGTCGCCATCCTCCACGCCAAGTACGCCCCGGCAAT CGTCAGGGGCCCCGTCTCCTTCACCCCGCAGATTTCCCCCAAGAACCTCCACTCCGCGCT CCCCTCCGCGCAGCCGCTCGCCCATGGCCCCAACGGCAAGTATTACAAGCTGGTTCTTGA CAACGATGTCACCGTCGCCGTCAAGCGGCTCGAGGCTAGCCGCCCTGAGGCCTCGCCGTC GTCGATGCCCAATGTTTCCAAGTCTGACATGAGGAGGGTGCAGAGGCAGCTGGAGTTGCT AGCTCGGGTGAGGCACCAGAATGTGATGGGATTGAAGGCGTATGTCCGGGAAGCCGACCG GCTATCGCTGGCGTACGATTTCGTGCCCGGGGGCAGCCTTGAGGATGTGATGAAGAGGGT GAGGTCTCTGCAGGTGAACCTCAATTGGGATGCAAGGAACAGGATTGCGATTGGAGTGGC CAAGGGATTGAGGTACTTGCATTTTGAGTGCACCCCCCGGATACTGCATTGCAGCCTCAA GCCGTCGAATGTGATGCTAGATGAAGATTTCGAACCGAGATTGGCAGATTGCGGCGTTTC AAGGCTAATTGCATCAGGTTCAGCTGATCCAGAACTGGCCAGCAGCCTTTATTCTGCCCC AGAGTGCTACCAAAGCAGCAGATACACAGATAAGAGCGATGTCTACAGTTTTGGCATGAT CCTTGGCGTGTTGCTAACTGGGAGAGACCCAACAGATCATTTTTTCTCGGGAGAAACCGG GCGCGGTGGATTAGCTAGATGGCTTCGGCACATGCAACAATCTGGTGACGCAAAAGACGC ACTGGATAGTAGTGTCTTAGGAGAGGAAGGGGAAGAAGATGAGATGGTGATGGCTGTTAG GGTTGCTATCATCTGTCTCTCAGATTTACCAGCCGATCGGCCATCCAGTGATGAACTAGT CCCCATGCTCACCCAGCTCCACAGCTTATGATCTCCGTCGAACGCTTCTTCGTAAAGTAC TAATCTCTGGATGTTCTTCATCCATGGCACAGTTTCTGAATCATGCTGGAGGGTCAAAAC TCAAAACCCTGGATGCACAAACTAGTGTAGCTTTCAGTGTATTCCCTTGGAAGAGCCCAT GCTAAATGGCCCACATGGGAGGGGAGCTAACAGTTTTCAGAGGCCAATGTAGGAAGGAAA TCTGGTAGGTCTTACTAGTTCAGTTGTCAGTTATGTTGTGTGTTGCAGCTACATGCTGGT GGTTGAGTGAGCCTCATTGTCATGTGATGCTTCTTTGCCCTTACATGATTTGGAGGAGGT AGGCAAGGAAGATGTGAATATTGTGGTGTCTTTGTAGAGAGAAAGCTGTCTTTTTCTTGG ATCTATTGCAGACCTGCAGTGGTGGTGGTATGATGATGTGCTTCTGCATTGACCGATCCA TCAATTCTATCATGTACTAGCAGTACATCGGCTCCACCCCTTGCCCATGACTTGCTGCAG GAGTGTCGGGGTCCAAACACCATTTTGATGGCATTTTTCTCTTCAGTTCACATGCTCGCC TGTCCAACAGCATTTTGATGGCCATGTATCATGCACAGTCACATTTTGTGTAAAATGTAA GGGCCTGTTTGGAGAGTTTTTGGCAGCTGCGGATTCTGAGAAATCATAGTTGTAGAATAG TTTTCCCAACTTCTCACAATCTGAAAGTTGCTTTTCAGAATCTAAAACTCCCCCAAATTG GCTCTGTAAATCTCCTTTGGCATGGGAAAATTTCATTGGAAACCTAGGAGTACTCTTCCT ATGCTTAGCTTAGCATGTCTGCATGTGTAACTTGTGTTGTTGAGCATGAGGAGAGGAGCC TACTACTAGTATGTTGACAAGAATCCAATGTGAAATGAAATTGTGAACCTGAACA



consensusID : consensus_5858#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 415
fasta sequence
                              [AGAAGAAGAGGTTTTCTCTGTCTAGGAGGGAGAGATTGTGCAGCGAGGTTTCTTTCTCTCACTAGGAGGTTTGAGGTTGCTGGGAGTGGTTACGAAGCTAATTAGGAGCTTTGCCGCTTTGGTTGAGTTTCTTGGTGAGAGGTGAGGAGAGCGTGAGCGAGCTCGCTCTCAGTCTCACGCCTTTTGTGTTGTGTTGTGGAGGAGGAGAAAGGAGGCGGTTTTTTGTTGTTTCTGTCAGCGTTTTCTCGTCAGGTACAGCCTACTATACTTCTTTCGAGTTCATATACCGTGCTGCTCTCGAATTCGGAAGCCCTTTTTTTTTCTGCTATCTTGCGAAGCTCCTGTGTGCAAAGTCGAAAAAGTTTGCCGAAGATGAAGTCTTGCTGAAGCTGCCCTGCTTTGCAGCTGCAGTTTC]

[+] EMBL AU181674             [AGAAGAAGAGGTTTTCTCTGTCTAGGAGGGAGAGATTGTGCAGCGAGGTTTCTTTCTCTCACTAGGAGGTTTGAGGTTGCTGGGAGTGGTTACGAAGCTAATTAGGAGCTTTGCCGCTTTGGTTGAGTTTCTTGGTGAGAGGTGAGGAGAGCGTGAGCGAGCTCGCTCTCAGTCTCACGCCTTTTGTGTTGTGTTGTGGAGGAGGAGAAAGGAGGCGGTTTTTTGTTGTTTCTGTCAGCGTTTTCTCGTCAGGTACAGCCTACTATACTTCTTTCGAGTTCATATACCGTGCTGCTCTCGAATTCGGAAGCCCTTTTTTTTTCTGCTATCTTGCGAAGCTCCTGTGTGCAAAGTCGAAAAAGTTTGCCGAAGATGAAGTCTTGCTGAAGCTGCCCTGCTTTGCAGCTGCAGTTTC]


>consensus_5858#1 AGAAGAAGAGGTTTTCTCTGTCTAGGAGGGAGAGATTGTGCAGCGAGGTTTCTTTCTCTC ACTAGGAGGTTTGAGGTTGCTGGGAGTGGTTACGAAGCTAATTAGGAGCTTTGCCGCTTT GGTTGAGTTTCTTGGTGAGAGGTGAGGAGAGCGTGAGCGAGCTCGCTCTCAGTCTCACGC CTTTTGTGTTGTGTTGTGGAGGAGGAGAAAGGAGGCGGTTTTTTGTTGTTTCTGTCAGCG TTTTCTCGTCAGGTACAGCCTACTATACTTCTTTCGAGTTCATATACCGTGCTGCTCTCG AATTCGGAAGCCCTTTTTTTTTCTGCTATCTTGCGAAGCTCCTGTGTGCAAAGTCGAAAA AGTTTGCCGAAGATGAAGTCTTGCTGAAGCTGCCCTGCTTTGCAGCTGCAGTTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5858#0      CTGTTGCTCCTCTCCTCTCCTCTCCTCTCCTCTGCTCTCCGAGTGAAACTTGCTTCTAGT 60
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      ACCAGCTGCGAGCTTGTTATGTTCCGTTTCTTCCAGCTTTGGTGCTCTCTCAACTCTGAA 120
consensus_5858#1      -----------------------------------------------------------A 1
                                                                                 *

consensus_5858#0      GAAGAAGAGGTTTTCTCTGTCTAGGAAGGAGAGATTGTGCAGCGAGGTTTCTTTCTCTCA 180
consensus_5858#1      GAAGAAGAGGTTTTCTCTGTCTAGGAGGGAGAGATTGTGCAGCGAGGTTTCTTTCTCTCA 61
                      ************************** *********************************

consensus_5858#0      CTAGGAGGTTTGAGGTTGCTGGGAGTGGTTACGAAGCTAATTAGGAGCTTTGCCGCTTTG 240
consensus_5858#1      CTAGGAGGTTTGAGGTTGCTGGGAGTGGTTACGAAGCTAATTAGGAGCTTTGCCGCTTTG 121
                      ************************************************************

consensus_5858#0      GTTGAGTTTCTTGGTGAGAGGTGAGGAGAGCGTGAGCGAGCTCGCTCTCAGTCTCACGCC 300
consensus_5858#1      GTTGAGTTTCTTGGTGAGAGGTGAGGAGAGCGTGAGCGAGCTCGCTCTCAGTCTCACGCC 181
                      ************************************************************

consensus_5858#0      TTTTGTGTTGTGTTGTGGAGGAGGAGAAAGGAGGCGGTTTTTTGTTGTTTCTGTCAGCGT 360
consensus_5858#1      TTTTGTGTTGTGTTGTGGAGGAGGAGAAAGGAGGCGGTTTTTTGTTGTTTCTGTCAGCGT 241
                      ************************************************************

consensus_5858#0      TTTCTCGTCAGCTGCAGTTTCTTGTCAGTTTCCATGGATGAGTAGCATGAACAAGACGCG 420
consensus_5858#1      TTTCTCGTCAGGTACAGCCTACTAT-ACTTCTTTCGAGTTCATATACCGTGCTGCTCTCG 300
                      *********** * ***  *  * * * **     *  *   **    *  *    * **

consensus_5858#0      AGCAGAAAATGGCATCTTCAACCAG-----TGGAGGAACTCGAGCTCACCCATTTGGTCC 475
consensus_5858#1      AATTCGGAAGCCCTTTTTTTTTCTGCTATCTTGCGAAGCTCCTGTGTGCAAAGTCGAAAA 360
                      *      **   * * **    * *     * * * * ***  *    *  * * *    

consensus_5858#0      TGTTCCTTGAGCATTCTATCTCCCAAAGGAGCAATCGCTTCTCCTCTTTCCATGGAGATG 535
consensus_5858#1      AGTTTGCCGAAGATGAAGTCTTGCTGAAGCTGCCCTGCTTTGCAGCTGCAGTTTC----- 415
                       ***    **  **    ***  *  * *       ****  *  **     *       

consensus_5858#0      ATGGCGAGCAAGAACCCTACCAAAACCCTCCTCCTCCTGCTCCTCCTCGTCTTCTTCCTC 595
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      TCGCTGGCTTGCTCCCAGCCGCTCCACTCGGAGCCCATGTCCACCACCACCACCGCCACC 655
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CAGCCCGCGCCACCGCCTCCCCCGCCGCAATCCAAGATTCCCCACGCGGAGGCCGGCGGC 715
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GCCGCCCGCCTCCGCCGCATCGTGCTCGGCGTCCTCTTCGGCTCCCTCACTGGCTTCCTC 775
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CTCTCCCTCGCCTTCCTCTACGCCATCCGCGTCGCCATCCTCCACGCCAAGTACGCCCCG 835
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GCAATCGTCAGGGGCCCCGTCTCCTTCACCCCGCAGATTTCCCCCAAGAACCTCCACTCC 895
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GCGCTCCCCTCCGCGCAGCCGCTCGCCCATGGCCCCAACGGCAAGTATTACAAGCTGGTT 955
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CTTGACAACGATGTCACCGTCGCCGTCAAGCGGCTCGAGGCTAGCCGCCCTGAGGCCTCG 1015
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CCGTCGTCGATGCCCAATGTTTCCAAGTCTGACATGAGGAGGGTGCAGAGGCAGCTGGAG 1075
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      TTGCTAGCTCGGGTGAGGCACCAGAATGTGATGGGATTGAAGGCGTATGTCCGGGAAGCC 1135
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GACCGGCTATCGCTGGCGTACGATTTCGTGCCCGGGGGCAGCCTTGAGGATGTGATGAAG 1195
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      AGGGTGAGGTCTCTGCAGGTGAACCTCAATTGGGATGCAAGGAACAGGATTGCGATTGGA 1255
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GTGGCCAAGGGATTGAGGTACTTGCATTTTGAGTGCACCCCCCGGATACTGCATTGCAGC 1315
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CTCAAGCCGTCGAATGTGATGCTAGATGAAGATTTCGAACCGAGATTGGCAGATTGCGGC 1375
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GTTTCAAGGCTAATTGCATCAGGTTCAGCTGATCCAGAACTGGCCAGCAGCCTTTATTCT 1435
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GCCCCAGAGTGCTACCAAAGCAGCAGATACACAGATAAGAGCGATGTCTACAGTTTTGGC 1495
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      ATGATCCTTGGCGTGTTGCTAACTGGGAGAGACCCAACAGATCATTTTTTCTCGGGAGAA 1555
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      ACCGGGCGCGGTGGATTAGCTAGATGGCTTCGGCACATGCAACAATCTGGTGACGCAAAA 1615
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GACGCACTGGATAGTAGTGTCTTAGGAGAGGAAGGGGAAGAAGATGAGATGGTGATGGCT 1675
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GTTAGGGTTGCTATCATCTGTCTCTCAGATTTACCAGCCGATCGGCCATCCAGTGATGAA 1735
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CTAGTCCCCATGCTCACCCAGCTCCACAGCTTATGATCTCCGTCGAACGCTTCTTCGTAA 1795
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      AGTACTAATCTCTGGATGTTCTTCATCCATGGCACAGTTTCTGAATCATGCTGGAGGGTC 1855
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      AAAACTCAAAACCCTGGATGCACAAACTAGTGTAGCTTTCAGTGTATTCCCTTGGAAGAG 1915
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CCCATGCTAAATGGCCCACATGGGAGGGGAGCTAACAGTTTTCAGAGGCCAATGTAGGAA 1975
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GGAAATCTGGTAGGTCTTACTAGTTCAGTTGTCAGTTATGTTGTGTGTTGCAGCTACATG 2035
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CTGGTGGTTGAGTGAGCCTCATTGTCATGTGATGCTTCTTTGCCCTTACATGATTTGGAG 2095
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GAGGTAGGCAAGGAAGATGTGAATATTGTGGTGTCTTTGTAGAGAGAAAGCTGTCTTTTT 2155
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      CTTGGATCTATTGCAGACCTGCAGTGGTGGTGGTATGATGATGTGCTTCTGCATTGACCG 2215
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      ATCCATCAATTCTATCATGTACTAGCAGTACATCGGCTCCACCCCTTGCCCATGACTTGC 2275
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      TGCAGGAGTGTCGGGGTCCAAACACCATTTTGATGGCATTTTTCTCTTCAGTTCACATGC 2335
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      TCGCCTGTCCAACAGCATTTTGATGGCCATGTATCATGCACAGTCACATTTTGTGTAAAA 2395
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      TGTAAGGGCCTGTTTGGAGAGTTTTTGGCAGCTGCGGATTCTGAGAAATCATAGTTGTAG 2455
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      AATAGTTTTCCCAACTTCTCACAATCTGAAAGTTGCTTTTCAGAATCTAAAACTCCCCCA 2515
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      AATTGGCTCTGTAAATCTCCTTTGGCATGGGAAAATTTCATTGGAAACCTAGGAGTACTC 2575
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      TTCCTATGCTTAGCTTAGCATGTCTGCATGTGTAACTTGTGTTGTTGAGCATGAGGAGAG 2635
consensus_5858#1      ------------------------------------------------------------
                                                                                  

consensus_5858#0      GAGCCTACTACTAGTATGTTGACAAGAATCCAATGTGAAATGAAATTGTGAACCTGAACA 2695
consensus_5858#1      ------------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)