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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 586 cluster # 586       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_586#0 length = 556 sequences # 2  

consensusID : consensus_586#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 556
fasta sequence
                              [ATACATGAACATGTAGCATCCTCCTGGTTCTCTTGGATTCTGATTGGGTTCTGAAGGTGTGTTGAAAGATGNAGAAGCTTTATCCCCTGGATTCAACATGTTATGGGAATTTGGGAGTATTTATCAACCATAGATGCTATGATGCGAATTTAGTTGAGATACCTGTTGAAGTGGAGACGCCTGATCATCATTATGTATCATCTTGCATTTTTCACAACCAAGAAGGTGGAGCATTTGAGGAGCTCACATGGGACTATGGTATTGATTTTGGTGATGGCAAGATCCTGTTAAAGCATTTCAGTGTCTATGTGGAAGCAGATATTGCCCGGTATCAGGCATCCGAGGAAACGAGGGAAAGCTGCTGCGAAATGATC-AAGCCCTTGGTAGAAGATACGGGGTTGATGCACGCGTGCATCACGGAACGAACTAAACTAATATCGTAGTAGATTAGCTA-CAATCTGTGCTTTATTTTAGAACTTG-TCTACTTGT-CAGTTAGACTG-TTCGAGAAA-CCTTTTGGTTTGTGAAT-GGCNCCTGAAGACCCCAAAGTCAGCGGCCG]

[+] EMBL BI806560             [ATACATGAACATGTAGCATCCTCCTGGTTCTCTTGGATTCTGATTGGGTTCTGAAGGTGTGTTGAAAGATGNAGAAGCTTTATCCCCTGGATTCAACATGTTATGGGAATTTGGGAGTATTTATCAACCATAGATGCTATGATGCGAATTTAGTTGAGATACCTGTTGAAGTGGAGACGCCTGATCATCATTATGTATCATCTTGCATTTTTCACAACCAAGAAGGTGGAGCATTTGAGGAGCTCACATGGGACTATGGTATTGATTTTGGTGATGGCAAGATCCTGTTAAAGCATTTCAGTGTCTATGTGGAAGCAGATATTGCCCGGTATCAGGCATCCGAGGAAACGAGGGAAAGCTGCTGCGAAATGATC AAGCCCTTGGTAGAAGATACGGGGTTGATGCACGCGTGCATCACGGAACGAACTAAACTAATATCGTAGTAGATTAGCTA CAATCTGTGCTTTATTTTAGAACTTG TCTACTTGT CAGTTAGACTG TTCGAGAAA CCTTTTGGTTTGTGAAT GGCNCCTGAAGACCCCAA            ]
[-] EMBL AU225365             [                                                                                                                                                                                                                                                                                                                                                    ccgctAAACGAGGGAAAGCTGCTGCGAAATGATCAAAGGACTTGGTAGAAGATACGGGGTTGATGCACGCGTGCATCACGGAACGAACTAAACTAATATCGTAGTAGATTAGCTACCAATCTGTGCTTTATTTTAGAACTTGTTCTACTTGTCCAGTTAGACTGTTTCGAGAAACCCTTTTGGTTTGTGAATGGGCGGCTGAAGACCCCAAAGTCAGCGGCCG]


>consensus_586#0 ATACATGAACATGTAGCATCCTCCTGGTTCTCTTGGATTCTGATTGGGTTCTGAAGGTGT GTTGAAAGATGNAGAAGCTTTATCCCCTGGATTCAACATGTTATGGGAATTTGGGAGTAT TTATCAACCATAGATGCTATGATGCGAATTTAGTTGAGATACCTGTTGAAGTGGAGACGC CTGATCATCATTATGTATCATCTTGCATTTTTCACAACCAAGAAGGTGGAGCATTTGAGG AGCTCACATGGGACTATGGTATTGATTTTGGTGATGGCAAGATCCTGTTAAAGCATTTCA GTGTCTATGTGGAAGCAGATATTGCCCGGTATCAGGCATCCGAGGAAACGAGGGAAAGCT GCTGCGAAATGATCAAGCCCTTGGTAGAAGATACGGGGTTGATGCACGCGTGCATCACGG AACGAACTAAACTAATATCGTAGTAGATTAGCTACAATCTGTGCTTTATTTTAGAACTTG TCTACTTGTCAGTTAGACTGTTCGAGAAACCTTTTGGTTTGTGAATGGCNCCTGAAGACC CCAAAGTCAGCGGCCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)