cluster # 5873

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Oryza sativa
cluster # 5873 cluster # 5873 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5873#0 length = 1418 sequences # 3
consensusID : consensus_5873#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1418
fasta sequence
                              [AAAAAAAGAAAAAAAGGAAATAGTCGTGCGGCGGTGTTTCCCCTTCTTCCTCTCGGCGGCGACGCCGACTCCTCGTGAGTTCGTCCGCCGCCGCCGCCGCCACCACCTGCACCGATCCCCATCCATCCCGCGAGCGAGTAGGGGCGCGCGTCGGTTGTCCGGCTGCTTCCGCGGTATCCTGAGTGGGATCTAGGAAGTGGTGGGAAATGGAGAAGCCGTTACAGCTTTGTCCAGGGTCAGTGAAGATAGATTTTGCCTCTGCCTCGTATGCTGGCAAGGCAGATATCGCTGCTACCGCGGCAGCGCTCTTGCATGCGCTTGGGCCGCCCCGAACACCTCCCTGCTATCAGCTCCCACTGGCAAAAGTAAATTCATCACTGCCACTATGGCCTCCAGTGATATGCCCTTCAACATTTGCCCAGAAGCGTCCTATGTCATTGCCTAGCCCACCTCCGGCCAAGAAGCTGCAAGTGCAGCAGTCTTCATCCATGCTGCCACAAGATTTTCCAAAGTTAGAGGTATTGCCAGTTGAAAAGCCCACAAAGTTGCAGGTGCGGCGGTCACCGCAACATGTATCCCCAGCGCTGAAGCAAGATTCACCGAAGATGGAGAGGCCATTGTTGCCAAGGCCTGCAACCTTTATTGACGTGATGCTGAGTTCTCAAAAGCCATCTAGCGAAATGTGGTCTGAAACAAAAGATGTGACACTGACAAGGAAAACAAACTGCAGCTGCAAGTATTCGAAATGCCTGAAGCTGTATTGTGAGTGCTTTGAAAAAGGCAGATACTGCATTGGTTGCAATTGCACAAACTGTTGCAACAATGTTAATCATGAGAATGCAAGACAGGATGCTATCAATGTTGCATTGGAACGGAATCCTGCAGCTTTTATGCCAAAAGTTTTGAATAGCACAGCCCACAACTGTGAGAGCAAAGCAGCAGAGGGTGATATTGTGGGTAAACATACAAAGGGGTGTAAATGCAAGAGAACAGAGTGTCTGAAGAAATACTGTGAAGGCTTCAAAGCTAGTGTTTTCTGTTCAGAGAACTGCAGATGTACGGGTTGCAAGAATTACAAGAGTAATGCAGATAGAATTTCCCAGAAGAACACTGTTCATGCGCATCATGTGCAGAATCCTGCTTCAAGTGGGATGGTTGGACAATCTGTGATAATTTTCCATGCAGCAGAAAATGACTCCAGTCTTTCATTGGCTGCATCTGTGAGCGATCATTCCATTAACAACAACACTTCACATGTAATTCTTTTGCAGCATACTTTTCAAATTTGTCACGGGCCCTGCTTCCTGATAGGCTGATACTTAATGTACAACACAATTTAAGGCTATCTACTGCAGCAATCTGGATAAGTGATGATAGTTGATTAGAGAATAATGCTTTTGTGTATAAAACAAAATAAT]

[+] EMBL AK071493             [AAAAAAAGAAAAAAAGGAAATAGTCGTGCGGCGGTGTTTCCCCTTCTTCCTCTCGGCGGCGACGCCGACTCCTCGTGAGTTCGTCCGCCGCCGCCGCCGCCACCACCTGCACCGATCCCCATCCATCCCGCGAGCGAGTAGGGGCGCGCGTCGGTTGTCCGGCTGCTTCCGCGGTATCCTGAGTGGGATCTAGGAAGTGGTGGGAAATGGAGAAGCCGTTACAGCTTTGTCCAGGGTCAGTGAAGATAGATTTTGCCTCTGCCTCGTATGCTGGCAAGGCAGATATCGCTGCTACCGCGGCAGCGCTCTTGCATGCGCTTGGGCCGCCCCGAACACCTCCCTGCTATCAGTTCCCACTGGCAAAAGTAAATTCATCACTGCCACTATGGCCTCCAGTGATATGCCCTTCAACATTTGCCCAGAAGCGTCCTATGTCATTGCCTAGCCCACCTCCGGCCAAGAAGCTGCAAGTGCAGCAGTCTTCATCCATGCTGCCACAAGATTTTCCAAAGTTAGAGGTATTGCCAGTTGAAAAGCCCACAAAGTTGCAGGTGCGGCGGTCACCGCAACATGTATCCCCAGCGCTGAAGCAAGATTCACCGAAGATGGAGAGGCCATTGTTGCCAAGGCCTGCAACCTTTATTGACGTGATGCTGAGTTCTCAAAAGCCATCTAGCGAAATGTGGTCTGAAACAAAAGATGTGACACTGCCAAGGAAAACAAACTGCAGCTGCAAGTATTCGAAATGCCTGAAGCTGTATTGTGAGTGCTTTGAAAAAGGCAGATACTGCATTGGTTGCAATTGCACAAACTGTTGCAACAATGTTAATCATGAGAATGCAAGACAGGATGCTATCAATGTTGCATTGGAACGGAATCCTGCAGCTTTTATGCCAAAAGTTTTGAATAGCACAGCCCACAACTGTGAGAGCAAAGCAGCAGAGGGTGATATTGTGGGTAAACATACAAAGGGGTGTAAATGCAAGAGAACAGAGTGTCTGAAGAAATACTGTGAAGGCTTCAAAGCTAGTGTTTTCTGTTCAGAGAACTGCAGATGTACGGGTTGCAAGAATTACAAGAGTAATGCAGATAGAATTTCCCAGAAGAACACTGTTCATGCGCATCATGTGCAGAATCCTGCTTCAAGTGGGATGGTTGGACAATCTGTGATAATTTTCCATGCAGCAGAAAATGACTCCAGTCTTTCATTGGCTGCATCTGTGAGCGATCATTCCATTAACAACAACACTTCACATGTAATTCTTTTGCAGCATACTTTTCAAATTTGTCACGGGCCCTGCTTCCTGATAGGCTGATACTTAATGTACAACACAATTTAAGGCTATCTACTGCAGCAATCTGGATAAGTGATGATAGTTGATTAGAGAATAATGCTTTTGTGTATAAAACAAAATAAT]
[+] EMBL CB659743             [                                         CCTTCTTCCTCTCGGCGGCGACGCCGACTCCTCGTGAGTTCGTCCGCCGCCGCCGCCGCCACCACCTGCACCGATCCCCATCCATCCCGCGAGCGAGTAGGGGCGCGCGTCGGTTGTCCGGCTGCTTCCGCGGTATCCTGAGTGGGATCTAGGAAGTGGTGGGAAATGGAGAAGCCGTTACAGCTTTGTCCAGGGTCAGTGAAGATAGATTTTGCCTCTGCCTCGTATGCTGGCAAGGCAGATATCGCTGCTACCGCGGCAGCGCTCTTGCATGCGCTTGGGCCGCCCCGAACACCTCCCTGCTATCAGCTCCCACTGGCAAAAGTAAATTCATCACTGCCACTATGGCCTCCAGTGATATGCCCTTCAACATTTGCCCAGAAGCGTCCTATGTCATTGCCTAGCCCACCTCCGGCCAAGAAGCTGCAAGTGCAGCAGTCTTCATCCATGCTGCCACAAGATTTTCCAAAGTTAGAGGTATTGCCAGTTGAAAAGCCCACAAAGTTGCAGGTGCGGCGGTCACCGCAACATGTATCCCCAGCGCTGAAGCAAGATTCACCGAAGATGGAGAGGCCATTGTTGCCAAGGCCTGCAACCTTTATTGACGTGATGCTGAGTTCTCAAAAGCCATCTAGCGAAATGTGGTCTGAAACAAAAGATGTGACACTGACAAGGAAAACAAACTGCAGCTGCAAGTATTCGAAATGCCTGAAGCTGTATTGTGAGTGCTTTG AAAAGGCAGATACTGCATTGGTTGCAATTGCACAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF306812             [                                                                                                                                                                                                                                                                                                                                           AACACCTCCCTGCTATCAGCTCCCACTGGCAAAAGTAAATTCATCACTGCCACTATGGCCTCCAGTGATATGCCCTTCAACATTTGCCCAGAAGCGTCCTATGTCATTGCCTAGCCCACCTCCGGCCAAGAAGCTGCAAGTGCAGCAGTCTTCATCCATGCTGCCACAAGATTTTCCAAAGTTAGAGGTATTGCCAGTTGAAAAGCCCACAAAGTTGCAGGTGCGGCGGTCACCGCAACATGTATCCCCAGCGCTGAAGCAAGATTCACCGAAGATGGAGAGGCCATTGTTGCCAAGGCCTGCAACCTTTATTGACGTGATGCTGAGTTCTCAAAAGCCATCTAGCGAAATGTGGTCTGAAACAAAAGATGTGACACTGACAAGGAAAACAAACTGCAGCTGCAAGTATTCGAAATGCCTGAAGCTGTATTGTGAGTGCTTTGAAAAAGGCAGATACTGCATTGGTTGCAATTGCACAAACTGTTGCAACAATGTTAATCATGAGAATGCAAGACAGGATGCTATCAATGTTGCATTGGAACGGAATCCTGCAGCTTTTATGCCAAAAGTTTTGAATAGCACAGCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_5873#0
AAAAAAAGAAAAAAAGGAAATAGTCGTGCGGCGGTGTTTCCCCTTCTTCCTCTCGGCGGC
GACGCCGACTCCTCGTGAGTTCGTCCGCCGCCGCCGCCGCCACCACCTGCACCGATCCCC
ATCCATCCCGCGAGCGAGTAGGGGCGCGCGTCGGTTGTCCGGCTGCTTCCGCGGTATCCT
GAGTGGGATCTAGGAAGTGGTGGGAAATGGAGAAGCCGTTACAGCTTTGTCCAGGGTCAG
TGAAGATAGATTTTGCCTCTGCCTCGTATGCTGGCAAGGCAGATATCGCTGCTACCGCGG
CAGCGCTCTTGCATGCGCTTGGGCCGCCCCGAACACCTCCCTGCTATCAGCTCCCACTGG
CAAAAGTAAATTCATCACTGCCACTATGGCCTCCAGTGATATGCCCTTCAACATTTGCCC
AGAAGCGTCCTATGTCATTGCCTAGCCCACCTCCGGCCAAGAAGCTGCAAGTGCAGCAGT
CTTCATCCATGCTGCCACAAGATTTTCCAAAGTTAGAGGTATTGCCAGTTGAAAAGCCCA
CAAAGTTGCAGGTGCGGCGGTCACCGCAACATGTATCCCCAGCGCTGAAGCAAGATTCAC
CGAAGATGGAGAGGCCATTGTTGCCAAGGCCTGCAACCTTTATTGACGTGATGCTGAGTT
CTCAAAAGCCATCTAGCGAAATGTGGTCTGAAACAAAAGATGTGACACTGACAAGGAAAA
CAAACTGCAGCTGCAAGTATTCGAAATGCCTGAAGCTGTATTGTGAGTGCTTTGAAAAAG
GCAGATACTGCATTGGTTGCAATTGCACAAACTGTTGCAACAATGTTAATCATGAGAATG
CAAGACAGGATGCTATCAATGTTGCATTGGAACGGAATCCTGCAGCTTTTATGCCAAAAG
TTTTGAATAGCACAGCCCACAACTGTGAGAGCAAAGCAGCAGAGGGTGATATTGTGGGTA
AACATACAAAGGGGTGTAAATGCAAGAGAACAGAGTGTCTGAAGAAATACTGTGAAGGCT
TCAAAGCTAGTGTTTTCTGTTCAGAGAACTGCAGATGTACGGGTTGCAAGAATTACAAGA
GTAATGCAGATAGAATTTCCCAGAAGAACACTGTTCATGCGCATCATGTGCAGAATCCTG
CTTCAAGTGGGATGGTTGGACAATCTGTGATAATTTTCCATGCAGCAGAAAATGACTCCA
GTCTTTCATTGGCTGCATCTGTGAGCGATCATTCCATTAACAACAACACTTCACATGTAA
TTCTTTTGCAGCATACTTTTCAAATTTGTCACGGGCCCTGCTTCCTGATAGGCTGATACT
TAATGTACAACACAATTTAAGGCTATCTACTGCAGCAATCTGGATAAGTGATGATAGTTG
ATTAGAGAATAATGCTTTTGTGTATAAAACAAAATAAT
clustalw multiple alignements is not computed in this case