cluster # 5874

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Oryza sativa
cluster # 5874 cluster # 5874 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5874#0 length = 401 sequences # 3

consensusID : consensus_5874#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 401
fasta sequence

                              [GCAAGCTACAATTACCCTCACTTAAAGGGAACTAAGC-TGG-GCCGCGCCCACAAGAGGATGCAGTACAACCGCCGCTTCGTCACCGCCGTCGTCGGATTCGGCAAGAAGCGCGGGCCCAACTCCTCCGAGAAGTAGACGCGCCGGGCCGCTCCGCCGGTGATGTCCCGTTTGTTCTTGGTAGTAGTTTCCTTTTAAGTGCTATATGCAAGAAAACAAGAAGGGGGAACCAATCTTTTGTAGCGTGTGAGCTCGATGCTCGTGTGATTTGGATCGAACTCAAAAGTGCTTAGTCTTATTA-TGCCGCATGTTAAGTTTGAGATATGATATGAGCTCGTGACTTAATTTTGCTTAAAAAAAAAAAAAAAAAAAAAAACAGAGCGGCCGCTCCAACATCAGAATGG]

[+] EMBL CB966877             [GCAAGCTACAATTACCCTCACCTAAAGGGAACTAAGC TGG GCCGCGCCCACACGAGGA GCAGTACAACCGCCGCTTCGTCACCGCCGTCGTCGGATTCGGCCAGAAGCGCGGGCCCAACTCCTCCGAGAAGTAGACGCGCCGGGCCGCTCCGCCGGTGATGTCCCGTTTGTTCTTGGTAGTAGTTTCCTTTTAAGTGCTATATGCAAGAAAACAAGAAGGGGGAACCAATCTTTTGTAGCGTGTGAGCTCGATGCTCGTGTGATTTGGATCGAACTCAAAAGTGCTTAGTCTTATTACTGCCGCATGTTAAGTTTGAGATATGATATGAGCTCGTGACTTAATTTTGCTTAAAAAAAAAAAAAAAAA                                  ]
[+] EMBL BU672920             [              aCCTCACT  AAGGGAA T AGC TGG G CG GCCCACAAGAGGATGCAGTACAACCGCCG TTCGTCACCGCCGTCGTCGGATTCGGCAAGAAGCGCGGGCCCAACTCCTCCGAGAAGTAGACGCGCCGGGCCGCTCCGCCGGTGATGTCCCGTTTGTTCTTGGTAGTAGTTTCCTTTTAAGTGCTATATGCAAGAAAACAAGAAGGGGGAACCAATCTTTTGTAGCGTGTGAGCTCGATGCTCGTGTGATTTGGATCGAACTCAAAAGTGCTTAGTCTTATTA TGCCGCATGTTAAGTTTGAGATATGATATGAGCTCGTGACTT                                                             ]
[+] EMBL BI306564             [                CTCACTTAAAGGGAACTAAGCTTGGNGCCGCGCCCACAAGAGGATGCAGTACAACCGCCGCTTCGTCACCGCCGTCGTCGGATTCGGCAAGAAGCGCGGGCCCAACTCCTCCGAGAAGTAGACGCGCCGGGCCGCTCCGCCGGTGATGTCCCGTTTGTTCTTGGTAGTAGTTTCCTTTTAAGTGCTATATGCAAGAAAACAAGAAGGGGGAACCAATCTTTTGTAGCGTGTGAGCTCGATGCTCGTGTGATTTGGATCGAACTCAAAAGTGCTTAGTCTTATTA TGCCGCATGTTAAGTTTGAGATATGATATGAGCTCGTGACTTAATTTTGCTTAAAAAAAAAAAAAAAAAAAAAAACAGAGCGGCCGCTCCAACATCAGAATGG]




>consensus_5874#0
GCAAGCTACAATTACCCTCACTTAAAGGGAACTAAGCTGGGCCGCGCCCACAAGAGGATG
CAGTACAACCGCCGCTTCGTCACCGCCGTCGTCGGATTCGGCAAGAAGCGCGGGCCCAAC
TCCTCCGAGAAGTAGACGCGCCGGGCCGCTCCGCCGGTGATGTCCCGTTTGTTCTTGGTA
GTAGTTTCCTTTTAAGTGCTATATGCAAGAAAACAAGAAGGGGGAACCAATCTTTTGTAG
CGTGTGAGCTCGATGCTCGTGTGATTTGGATCGAACTCAAAAGTGCTTAGTCTTATTATG
CCGCATGTTAAGTTTGAGATATGATATGAGCTCGTGACTTAATTTTGCTTAAAAAAAAAA
AAAAAAAAAAAAACAGAGCGGCCGCTCCAACATCAGAATGG

clustalw multiple alignements is not computed in this case