Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5884 cluster # 5884       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5884#0 length = 367 sequences # 3  

consensusID : consensus_5884#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 367
fasta sequence
                              [TCTCTCTCTCTCCTCGAAAACCCCAACACACACAACGCGAACCCCACTCCGCGATGGCGTCCGCCGGCGATCGCCGCGGCGGCGGG-G-GGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTAC-TGCACCACGGAGNGCTTCTGGAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGC-AGAACTGCAAGCACCGCACGGAGTTGT]

[+] EMBL AU067957             [TCTCTCTCTCTCCTCGAAAACCCCAACACACACAACGCGAACCCCACTCCGCGATGGCGTCCGCCGGCGATCGCCGCGGCGGCGGG G GGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTAC TGCACCACGGAGTGCTTCTGGAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGC AGAACTGCAAGCACCGCACGGAGTTGT]
[+] EMBL OSC29121             [                     CCCAACACACACAACGCGAACCCCACTCCGCGATGGCGTCCGCCGGCGATCGACGCGGCGGCGGGTG GGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTACTTGCACCACGGAGNGCTTCTGGAGCTTTTCATCATTCTGGAAACACCTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGCAAGAACT                     ]
[+] EMBL C72505               [                      CCAACACACACAACGCGAACCCCACTCCGCGATGGCGTCCGCCGGCGATCGCCGCGGCGGCGGG GNGGCCTCCCGGCTCCGGCGACGACTCCGGGGGTGGTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAATGGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTAC TGCACCACGGAGN CTTCTGGAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAGGCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGC AGAACTNCAAGCACCGCACGG      ]


>consensus_5884#0 TCTCTCTCTCTCCTCGAAAACCCCAACACACACAACGCGAACCCCACTCCGCGATGGCGT CCGCCGGCGATCGCCGCGGCGGCGGGGGGCCTCCCGGCTCCGGCGACGACTCCGGGGGTG GTTGGGAGACTGTTGAGAAGAGGGTAAAGAAACCAGCGCAACAAGTTGGGAAGGGGCAAT GGGGACAATGGAATTCTCCAAATGCTGCACCTGCACCTACTGCACCACGGAGNGCTTCTG GAGCTTTTCATCATTCTGGAAACACTTTGGTTCGACATTCTGATCGTAGGCCAGCAAGAG GCACTCCTAGGCCACCACCACAAAACAGGTCTATAGAGGCAGAACTGCAAGCACCGCACG GAGTTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)