cluster # 5887

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Oryza sativa
cluster # 5887 cluster # 5887 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5887#0 length = 522 sequences # 3

consensusID : consensus_5887#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 522
fasta sequence

                              [GGTAACTTCATACATGCTACTAGTTATATAGCATTAGTGCTTGTTACAAATATTTCTGAATTATCTT-GACTAAATAAATACTACTCGAGTACTATCTACCATTCAGTAAACATTCTGCTAATCCTTTTACTCCCTCCATCCCGAAAAAAATGAATCTAGGACTGGATGTGACACATTTAGTACAACGAATCT-GGACAGAGGTATGTCTAGATTCATAGTACTAGGATGTGTCACACCAGTACTAGGTTGGTTTTTTATGGGACGGAGGGAGTACATCAGAAATTTTTCATAAATCTATGAGAACTGTTGT-AATTTTGACTCCACACACTATCTTCAGTTATATTTCTTAAGGGAAAATTACTCTCACAGCAATCCTTTGAAATGGGTTTGCATGTACATTTGAAATTTGACACTAACTGTAATAGCACTGGATAGCTGCTCTGTTTTTATCAACTTCTACTTGTAATTTCAGGGACCTTAATAAACCTTTAGTGGCTTGGACTTGTATGTGCATTACTGCAA]

[+] EMBL CF303276             [GGTAACTTCATACATGCTACTAGTTATATAGCATTAGTGCTTGTTACAAATATTTCTGAATTATCTT GACTAAATAAATACTACTCGAGTACTATCTACCATTCAGTAAACATTCTGCTAATCCTTTTACTCCCTCCATCCCGAAAAAAATGAATCTAGGACTGGATGTGACACATTTAGTACAACGAATCT GGACAGAGGTATGTCTAGATTCATAGTACTAGGATGTGTCACACCAGTACTAGGTTGGTTTTTTATGGGACGGAGGGAGTACATCAGAAATTTTTCATAAATCTATGAGAACTGTTGT AATTTTGACTCCACACACTATCTTCAGTTATATTTCTTAAGGGAAAATTACTCTCACAGCAATCCTTTGAAATGGGTTTGCATGTACATTTGAAATTTGACACTAACTGTAATAGCACTGGATAGCTGCTCTGTTTTTATCAACTTCTACTTGTAATTTCAGGGACCTTAATAAACCTTTAGTGGCTTGGACTTGTATGTGCATTACTGCAA]
[+] EMBL CF304630             [GGTAACTTCATACATGCTACTAGTTATATAGCATTAGTGCTTGTTACAAATATTTCTGAATTATCTT GACTAAATAAATACTACTCGAGTACTATCTACCATTCAGTAAACATTCTGCTAATCCTTTTACTCCCTCCATCCCGAAAAAAATGAATCTAGGACTGGATGTGACACATTTAGTACAACGAATCT GGACAGAGGTATGTCTAGATTCATAGTACTAGGATGTGTCACACCAGTACTAGGTTGGTTTTTTATGGGACGGAGGGAGTACATCAGAAATTTTTCATAAATCTATGAGAACTGTTGT AATTTTGACTCCACACACTATCTTCAGTTATATTTCTTAAGGGAAAATTACTCTCACAGCAATCCTTTGAAATGGGTTTGCATGTACATTTGAAATTTGACACTAACTGTGATAGCACTGGATAGCTGCTCTGT                                                                              ]
[+] EMBL CF303563             [                                                AATATTTGTGAATTATCTTAGACTAAATAAATACTACTGAAGTGCTATCTACCATTCAGTAAACATTCTGCTAATCCTTTGACTGCCTCCATTCCGAAAAAAATGAATCTAGGACTGGATGTGACACATTTAGTACAACGAATCTGGGACAGAGGTGTGTCTAGATTCATAGTACTAGGATGTGTCACACCAGTACTAGGTTGGTTTTTTATGGGACGGAGGGAGTACATGATAAATTTTTCATAAATTTATGATAACTGTTGTAAATTGTGACTCCAGACACTATCTTCAGTTATATTGCTTAAGGGAAAA TACTCTCACAG AATCCTTTGAAATGGGTGTGCATGTACATTTGAAATTT                                                                                                                  ]




>consensus_5887#0
GGTAACTTCATACATGCTACTAGTTATATAGCATTAGTGCTTGTTACAAATATTTCTGAA
TTATCTTGACTAAATAAATACTACTCGAGTACTATCTACCATTCAGTAAACATTCTGCTA
ATCCTTTTACTCCCTCCATCCCGAAAAAAATGAATCTAGGACTGGATGTGACACATTTAG
TACAACGAATCTGGACAGAGGTATGTCTAGATTCATAGTACTAGGATGTGTCACACCAGT
ACTAGGTTGGTTTTTTATGGGACGGAGGGAGTACATCAGAAATTTTTCATAAATCTATGA
GAACTGTTGTAATTTTGACTCCACACACTATCTTCAGTTATATTTCTTAAGGGAAAATTA
CTCTCACAGCAATCCTTTGAAATGGGTTTGCATGTACATTTGAAATTTGACACTAACTGT
AATAGCACTGGATAGCTGCTCTGTTTTTATCAACTTCTACTTGTAATTTCAGGGACCTTA
ATAAACCTTTAGTGGCTTGGACTTGTATGTGCATTACTGCAA

clustalw multiple alignements is not computed in this case