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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5901 cluster # 5901       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5901#0 length = 679 sequences # 3  

consensusID : consensus_5901#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 679
fasta sequence
                              [GGTGCCCTTCCTCGAGTTAGTAAGGTCGGGGTCTGTCTACCGTGAGTACCCTGATCTTCCCGGGTACTATGATGGCAGGTACTGGACCATGTGGAACTGCCCATGTTCGGATGCATCTCGATNCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGAGTGCATTTGTTCGCATCATCGGNTTCGACAACGTCAGGCAGGTGCAGTTGAGTTAGTTTCATC-GCCTACAAGCCCCC-GGGTTGCGAGGAGTCCGGCGGAAACTAAGCTAGTTGGCAAGCC-AGCAAGC-TCACTCGTGAGCTC-TATACA-GAGGAGACTCGATTGATCTATTCGGTTTTGGCAGCTTTGAACGTTCGAATCGGGCCCCCTT-GCATTGGTTTCCCCT-TTCCCTGTTTGTTGCTTCCGTGTTTTTTTTTTTCAGCTTGTTTGTGTCAACATCAGCTGTGTATGTATGTACATATGTATGTATCAACATAGGTTGAAGAGCATGCATATGTGAATGCTAGCACCAGGCTAATCATATGCACATACACATCGTAATAAATATATTGTACNAATCGTC-CAAAACGATACTTATATGTAATACTATACTCAGACCCAACTT-GATA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCNCNAAAAAAAANAAAAAAAAAA]

[+] EMBL BM418734             [GGTGCCCTTCCTCGAGTTAGTAAGGTCGGGGTCTGTCTACCGTGAGTACCCTGATCTTCCCGGGTACTATGATGGCAGGTACTGGACCATGTGGAACTGCCCATGTTCGGATGCATCTCGATNCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGAGTGCATTTGTTCGCATCATCGGNTTCGACAACGTCAGGCAGGTGCAGTTGAGTTAGTTTCATC GCCTACAAGCCCCC GGGTTGCGAGGAGTCCGGCGGAAACTAAGCTAGTTGGCAAGCC AGCAAGC TCACTCGTGAGCTC TATACA GAGGAGACTCGATTGATCTATTCGGTTTTGGCAGCTTTGAACGTTCGAATCGGGCCCCCTT GCATTGGTTTCCCCT TTCCCTGTTTGTTGCTTCCGTGTTTTTTTTTTTCAGCTTGTTTGTGTCAACATCAGCTGTGTATGTATGTACATATGTATGTATCAACATAGGTTGAAGAGCATGCATATGTGAATGCTAGCACCAGGCTAATCATATGCACATACACATCGTAATAAATATATTGTACNAATCGTC CAAAACGATACTTATATGTAAaaaaaaaa                                                                                  ]
[+] EMBL BI809501             [                                                                                                                                                                                                                                TTAGTTTCATCGGCCTACAAGCCCCCTGGGTTGCGAGGAGTCCGGCGGAAACTAAGCTAGTTGGCAAGCCAAGCAAGCGTCACTCGTGAGCTCGTATACACGAGGAGACTCGATTGATCTATTCGGTTTTGGCAGCTTTGAACGTTCGAATCGGGCCCCCTTGGCATTGGTTTCCCCTGTTCCCTGTTTGTTGCTTCCGTTTTTTTTTTTTTCAGCTTGTTTGTGTCAACATCAGCTGTGTATGTATGTACATATGTATGTATCAACATAGGTTGAAGAGCATGCATATGTGAAT CTAGCACCA GCTAATCATATGCACATACACATCGTAATAAATATATTGTACAAATCGTCAAAAAACGATACTTATATGTAATACTATACTCAGACCCAACTT GATA   AAAAAAAAA                                                    ]
[+] EMBL BM419251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgATCAACATAGGTTGAAGAGCATGCATATGTGAATGCTAGCCCCAGGCTAATCATATGCACATACACATCGTAATAAATATATTGTACNAATCGTC CAAAACGATACTTATATGTAATACTATACTCAGACCCAACTTNTATACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCNCNAAAAAAAANAAAAAAAAAA]


>consensus_5901#0 GGTGCCCTTCCTCGAGTTAGTAAGGTCGGGGTCTGTCTACCGTGAGTACCCTGATCTTCC CGGGTACTATGATGGCAGGTACTGGACCATGTGGAACTGCCCATGTTCGGATGCATCTCG ATNCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGAGTGCATTT GTTCGCATCATCGGNTTCGACAACGTCAGGCAGGTGCAGTTGAGTTAGTTTCATCGCCTA CAAGCCCCCGGGTTGCGAGGAGTCCGGCGGAAACTAAGCTAGTTGGCAAGCCAGCAAGCT CACTCGTGAGCTCTATACAGAGGAGACTCGATTGATCTATTCGGTTTTGGCAGCTTTGAA CGTTCGAATCGGGCCCCCTTGCATTGGTTTCCCCTTTCCCTGTTTGTTGCTTCCGTGTTT TTTTTTTTCAGCTTGTTTGTGTCAACATCAGCTGTGTATGTATGTACATATGTATGTATC AACATAGGTTGAAGAGCATGCATATGTGAATGCTAGCACCAGGCTAATCATATGCACATA CACATCGTAATAAATATATTGTACNAATCGTCCAAAACGATACTTATATGTAATACTATA CTCAGACCCAACTTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCNCN AAAAAAAANAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)