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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5906 cluster # 5906       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5906#0 length = 1084 sequences # 3  

consensusID : consensus_5906#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1084
fasta sequence
                              [TTGTCTCTAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAACACCTTCACCCACCGTTGCCCCTGTCAATCCGCCATCTCCGACGCCGCCTCCCAAGTGTCCGCTGGCGTTAATTAATCTCAACGCGTGCATTAGTGTCGGTCTTGGCAACCCGCTCTTGAACCAGGCGTGCTGCTCGCAGCTCTCCAGCCTCCCGAGCGACACCGCTGCTGTCTGCCTTTGCGAAGCCATCAAGGTTAATGCTCTCGTCAATCTGAAGGTCAAAATCCCCGACATCCTTAAAGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGATAGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCAGCATATATATATATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTTTTGGACGACCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGATTGTGCTATATATGTATGTGTACACACACGTGGCTTGATCATATCATTAAGGGTACGTGCTAGAAGATTTGATTGTGTAAAAACATAAAAGGAAAAATGTCATGCCGTTACGTAGCGTATCGTTA]

[+] EMBL CB682703             [TTGTCTCTAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAACACCTTCACCCACCGTTGCCCCTGTCAATCCGCCATCTCCGACGCCGCCTCCCAAGTGTCCGCTGGCGTTAATTAATCTCAACGCGTGCATTAGTGTCGGTCTTGGCAACCCGCTCTTGAACCAGGCGTGCTGCTCGCAGCTCTCCAGCCTCCCGAGCGACACCGCTGCTGTCTGCCTTTGCGAAGCCATCAAGGTTAATGCTCTCGTCAATCTGAAGGTCAAAATCCCCGACATCCTTAAAGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGATAGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCCGCATATATATATATATATATATATATATATGCTGGGGGCTTGCCTC                                                                                                                                                                                                                                                                           ]
[-] EMBL CB682704             [                                                                                                                                                                                                                                                  ACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAACACCTTCACCCACCGTTGCCCCTGTCAATCCGCCATCTCCGACGCCGCCTCCCAAGTGTCCGCTGGCGTTAATTAATCTCAACGCGTGCATTAGTGTCGGTCTTGGCAACCCGCTCTTGAACCAGGCGTGCTGCTTGCAGCTCTCCAGCCTCCCGAGCGACACCGCTGCTGTCTGCCTTTGCGAAGCCATCAAGGTTAATGCTCTCGTCAATCTGAAGGTCAAAATCCCCGACATCCTTAAAGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGATAGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCAGCATATATATATATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTTTTGGACGACCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGATTGTGCTATATATGTATGTGTACACACACGTGGCTTGATCATATCATTAAGGGTACGTGCTAGAAGATTTGATTGTGTAAAAACATAAAAGG                                 ]
[-] EMBL CF281146             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCCCCTGTCAATCCGCCATCTCCGACGCCGCCTCCCAAGTGTCCGCTGGCGTTAATTAATCTCAACGCGTGCATTAGTGTCGGTCTTGGCAACCCGCTCTTGAACCAGGCGTGCTGCTCGCAGCTCTCCAGCCTCCCGAGCGACACCGCTGCTGTCTGCCTTTGCGAAGCCATCAAGGTTAATGCTCTCGTCAATCTGAAGGTCAAAATCCCCGACATCCTTAAAGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGATAGCGTGCATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCAGC    ATATATATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTTTTGGACGACCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCATGGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGATTGTGCTATATATGTATGTGTACACACACATGGCTTGATCATATCATTATGTGTACGTGCTAGAAGATTTGATTGTGTAAAAAAAAAAAAAAAAAAATGTCATGCCGTTACGTAGCGTATCGTTA]


>consensus_5906#0 TTGTCTCTAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGC GAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTA GTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAG ATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATC GCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGT AGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGA GGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAAC ACCTTCACCCACCGTTGCCCCTGTCAATCCGCCATCTCCGACGCCGCCTCCCAAGTGTCC GCTGGCGTTAATTAATCTCAACGCGTGCATTAGTGTCGGTCTTGGCAACCCGCTCTTGAA CCAGGCGTGCTGCTCGCAGCTCTCCAGCCTCCCGAGCGACACCGCTGCTGTCTGCCTTTG CGAAGCCATCAAGGTTAATGCTCTCGTCAATCTGAAGGTCAAAATCCCCGACATCCTTAA AGTATGCGGGAAGGTCTCCGCTGTAGTTTGTGTTTAATAAGTACGTCGAGAGATAGCGTG CATATATATACGTACGTACGTATGTATGTACATGCTATACATAGGTGTGCAGCATATATA TATATATATATATATATATATGCTGTGTGCTTGCCTCTACATATATACTGTATTAAACTT TTGGACGACCCAAATATATATCCGCCAGCAGCATGCGTGCGCGTACGTGCCGTGCTTCAT GGAGGTAGGGTCTTAATATCCATATATGTTTAAGAATAATTAAGTTACAGGATCTGGGAT TGTGCTATATATGTATGTGTACACACACGTGGCTTGATCATATCATTAAGGGTACGTGCT AGAAGATTTGATTGTGTAAAAACATAAAAGGAAAAATGTCATGCCGTTACGTAGCGTATC GTTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)