These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5912#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 581 fasta sequence [GTCGCGCAGC-TTAAGAGCTTCTTCGTTGTTGCTGCTGCCGTGTGTTGCTAAGCTTCAAGATGTCGCAGAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGGAGAACTTCGCCAGCCTCGAGGACGTGGCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGCAGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGGCGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGAGATGATCACGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATGTGTTGGTA-CGTGTTCCAACAG-CGGCGGC-GGTGTA-CT-CCT-GGGCTA-GGTG-CAGAAAAAGGGTTGGGGTGGTGGTTCTTCGATCGAGACTGATCTCGTGTCCTGTTTAGCATGCCGTTTGATTGTTTTTCTCGTGATGTATTTCCTCCTCCTCCTCGTGATGCGTAATTTCTATCTCGATCACAAGTAAAGAGAAGAAANCAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU075817 [GTCGCGCAGCTTTAAGAGCTTCTTCGTTGTTGCTGCTNCCGTGTGTTGCTAAGCTTCAAGATGTCGCANAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGGAGAACTTCGCCAGCCTCGAGGACGTGNCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGCAGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGGCGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGANATGATCACGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATGTGTTGGTA CGTGTTCCAACAG CGGCGGC GGTGTA CT CCT GGGCTA GGTG CAGAAAAAGGGTTGGGGTGGTGGTTCTTCGATCGAGACTGATCTCGTGTCCTGTTTAGCATGCCGTTTGATTGTTTTTCTCGTGATGTATTTCCTCCTCCTCCTCGTGATGCGTAATTTCTATCTCGATCACAAGTAAAGAGAAGAAANCAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU075816 [GTCGCGCAGC TTAAGAGCTTCTTCGTTGTTGCTGCTGCCGTGTGTTGCTAAGCTTCAAGATGTCGCAGAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGGAGAACTTCGCCAGCCTCGAGGACGTGGCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGCAGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGGCGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGAGATGATCACGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATGTGTTGGTA CGTGTTCCAACAG CGGCGGC GGTGTA CT CCT GGGCTA GGTG CAGAAAAAGGGTTGGGGTGGTGGTTCTTCGATCGAGACTGATCTCGTGTCCTGTTTAGCATGCCGTTTGATTGTTTTTCTCGTGATGTATTTCCTCCTCCTCCTCGTGA ] [+] EMBL CA753436 [ AGC TTAAGAGCTTCTTCGTTGTTGCTGCTGCCGTGTGTTGCTAAGCTTCAAGATGTCGCAGAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGGAGAACTTCGCCAGCCTCGAGGACGTGGCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGCAGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGGCGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGAGATGATCACGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATGTGTAGGTACCGTGTTCCAACAGCCGGCGGCGGGTGTACCTCCCTGGGGCTAGGGTGCCAGAAAAAaaggggg ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||