These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5919#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1920 fasta sequence [ATCGCCCCAAACCCCCCTCTCCTCGCCTCTCTTCCTCCTCTCGCCAAATGATGAAGTCCCTCTTCCTCTTTTCCGCCCACCCCAAGCCGCCTCCTCTCCCCCCATCCCCCCACCTCCGCAAGCTCCTCCGGCTCACCGCCTCCGCCTCCACATCCGCCTCCTCCCCGCCCCGCGCCGGCTGCTCTCGGGGCCCCGCCCATGCCAGGCCCCGGCCCAGCCCCCGCCCCTCCCCCTCCTCCTCCCTCTACGCGCGCCCCAGCCTCCTCGACATGGAGCGCGGCCGCGCCGCCCGCCGCGCCGACGTCGACGCGTTCCTCGCCTCGCTCGGCGTCGACCCGGGCGAGCTCGCCGGCCTCGAGCTCCCCGCCACCGTCGACGTCATGCGCGAGCGCGTCGAGTTCCTGCACTCCCTCGACCTCTCCAACGAGGACCTCGCCGCGTACCCGCTCGCGCTGGGCTGCAGCGTCCGCAAGAACATGGTCCCCGTCCTCGACTACCTCGGCAAGCTCGGCGTCCGCCAGGACGCGCTCCCGGACCTGCTCCGCCGCTACCCGCAGGTGCTCCACGCCAGCGTCGTCGTCGACCTCGCCCCCGTTGTCAAGTACCTCCAGGGCATGGACGTCAGGCCGCACGACGTGCCGCGGGTGCTCGAGCGCTACCCCGAGCTCCTCGGCTTCAAGCTCGAGGGTACCATGAGCACCTCTATCGCCTACCTCGTCGGCATTGGCGTGGCAAGGCGGCAGGTTGGCAGCGTCATCACCCGTTTCCCAGAGGTGCTGGGCATGCGGGTGGGTAAGATCATTAAGCCTTTCGTCGAACACCTTGAGGGCATTGGGTTGCAGAGGCTAGCTATTGCAAGAATCATCGAGAAGAAGCCATATGTTCTTGGTTTTGGGTTGGAGGACAAGGTGAAGCCTAATATTGAGGCGCTTCTGGAATTTGGGGTGAGGAAGGAGGCATTAGCATTCATTGTGGCACAATACCCAGACATTCTTGGAATTGAGCTGAGAGACAAGCTTGCTACACAACAGAGCTTGTTTGAGTCTAGCATTTTGGTCAGCAGTGAAGATTTTGGTAGAGTGATAGAGAGGATGCCACAAGCCATTAGCCTTGGCCGAACTGCAGTTCTAAAGCATGTTAATTTCCTTACATCTTGTGGCTTCTTGCTCTCTCAGGTCAGCAAGATGGTCGTAGCATGCCCACAGCTGCTCGCATTGAACATGGATATAATGAAGATGAGCTTTGAGTACTTCCAGAATGAGATGGAGAGGGATTTGGAGGAGCTGGTTGAATTCCCTGCATTCTTTACATATGGCCTTGAGTCGACTGTAAGGCCACGGCA-TGAGATGGTGGCGAAGAAGGGATTCACATGCTCTCTTGCATGGCTTCTAAACTGTTCTGATGCCAAATTCGATGAGCGCATGAAATATGATACGATTGGCATCGAGGAAATGGAAGTTGATAACTCTTTTGACACGAACACTTTGTCGGAGCGAGTAGAGGATGAGGTGGAAGATGAAGATCTGGATGAGGATAGTGATTATGACAGCACCGATGATGAGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTCTTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGC-GGTCACTAGGTGGTTGTTTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCCAATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGTTACTGACAAGTTGGCATTTCCATTTAGAAACATATTTTTGAGAAAAAATACCTCGTGTGGACAGTTCATATTTCCTGAATACGAAACTTCATTTTAACCTGGTTCTGGCCAGTGCANAAAAAAAAAAAA] [+] EMBL AK102821 [ATCGCCCCAAACCCCCCTCTCCTCGCCTCTCTTCCTCCTCTCGCCAAATGATGAAGTCCCTCTTCCTCTTTTCCGCCCACCCCAAGCCGCCTCCTCTCCCCCCATCCCCCCACCTCCGCAAGCTCCTCCGGCTCACCGCCTCCGCCTCCACATCCGCCTCCTCCCCGCCCCGCGCCGGCTGCTCTCGGGGCCCCGCCCATGCCAGGCCCCGGCCCAGCCCCCGCCCCTCCCCCTCCTCCTCCCTCTACGCGCGCCCCAGCCTCCTCGACATGGAGCGCGGCCGCGCCGCCCGCCGCGCCGACGTCGACGCGTTCCTCGCCTCGCTCGGCGTCGACCCGGGCGAGCTCGCCGGCCTCGAGCTCCCCGCCACCGTCGACGTCATGCGCGAGCGCGTCGAGTTCCTGCACTCCCTCGACCTCTCCAACGAGGACCTCGCCGCGTACCCGCTCGCGCTGGGCTGCAGCGTCCGCAAGAACATGGTCCCCGTCCTCGACTACCTCGGCAAGCTCGGCGTCCGCCAGGACGCGCTCCCGGACCTGCTCCGCCGCTACCCGCAGGTGCTCCACGCCAGCGTCGTCGTCGACCTCGCCCCCGTTGTCAAGTACCTCCAGGGCATGGACGTCAGGCCGCACGACGTGCCGCGGGTGCTCGAGCGCTACCCCGAGCTCCTCGGCTTCAAGCTCGAGGGTACCATGAGCACCTCTATCGCCTACCTCGTCGGCATTGGCGTGGCAAGGCGGCAGGTTGGCAGCGTCATCACCCGTTTCCCAGAGGTGCTGGGCATGCGGGTGGGTAAGATCATTAAGCCTTTCGTCGAACACCTTGAGGGCATTGGGTTGCAGAGGCTAGCTATTGCAAGAATCATCGAGAAGAAGCCATATGTTCTTGGTTTTGGGTTGGAGGACAAGGTGAAGCCTAATATTGAGGCGCTTCTGGAATTTGGGGTGAGGAAGGAGGCATTAGCATTCATTGTGGCACAATACCCAGACATTCTTGGAATTGAGCTGAGAGACAAGCTTGCTACACAACAGAGCTTGTTTGAGTCTAGCATTTTGGTCAGCAGTGAAGATTTTGGTAGAGTGATAGAGAGGATGCCACAAGCCATTAGCCTTGGCCGAACTGCAGTTCTAAAGCATGTTAATTTCCTTACATCTTGTGGCTTCTTGCTCTCTCAGGTCAGCAAGATGGTCGTAGCATGCCCACAGCTGCTCGCATTGAACATGGATATAATGAAGATGAGCTTTGAGTACTTCCAGAATGAGATGGAGAGGGATTTGGAGGAGCTGGTTGAATTCCCTGCATTCTTTACATATGGCCTTGAGTCGACTGTAAGGCCACGGCA TGAGATGGTGGCGAAGAAGGGATTCACATGCTCTCTTGCATGGCTTCTAAACTGTTCTGATGCCAAATTCGATGAGCGCATGAAATATGATACGATTGGCATCGAGGAAATGGAAGTTGATAACTCTTTTGACACGAACACTTTGTCGGAGCGAGTAGAGGATGAGGTGGAAGATGAAGATCTGGATGAGGATAGTGATTATGACAGCACCGATGATGAGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTCTTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGC GGTCACTAGGTGGTTGTTTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCCAATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGTTACTGACAAGTTGGCATTTCCATTTAGAAACATATTTTTGAGAAAAAATACCTCGTGTGGACAGTTCATATTTCCTGAATACGAAACTT ] [+] EMBL CA767530 [ GGCTTCTTGCTCTCTCAGGTCAGCAAGATGGTCGTAGCATGCCCACAGCTGCTCGCATTGAACATGGATATAATGGAGATGAGCTTTGAGTACTTCCAGAATGAGATGGAGAGGGATTTGGTGGAGCTGGTTGAATTCCCTGCATTCTTTACATATGGCCTTGAGTCGACTGTAAGGCCACGGCACTGAGATGGTGGCGAAGAAGGGATTCACATGCTCTCTTGCATGGCTTCTAAACTGTTCTGATGCCAAATTCGATGAGCGCATGAAATATGATACGATTGGCATTGAGGAAATGGAAGTTGATAACTCTTTTGACACGAACACTTTGTCGGAGCAAGTAGAGGATGAGGTGGAAGATGAAGATCTGGATGAGGATAGTGATTATGACAGCACCGATGATGAGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTCTTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGC GGTCACTAGGTGGTTGTTTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCCAATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGGTACTGACAAGNTGGCATTTCCATCTAGAAACATA ] [+] EMBL AU182125 [ CAGCACCGATGATGAGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTCTTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGCNGGTCACTAGGTGGTTGTTTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCCAATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGTTACTGACAAGTTGGCATTTCCATTTAGAAACATATTTTTGAGAAAAAATACCTCGTGTGGACAGTTCATATTTCCTGAATACGAAACTTCATTTTAACCTGGTTCTGGCCAGTGCANAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||