cluster # 5920

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Oryza sativa
cluster # 5920 cluster # 5920 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5920#0 length = 2111 sequences # 3
consensusID : consensus_5920#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2111
fasta sequence
                              [GAAAGCGTAAGAAAAATAAAAGGAGAAAAAGGAATAGAGAAATTGGGGAAGAGAGCTACCTCGAATCGAAGCTGCGATCTCCACCTGGTGAAATAGGAGAATTGATGAATTGCTGAGATTTGGTGATTAGAGGGACCTTTGCTGCTGAGGCATTGAGGTACACTAAAAGCAAGGGTGTGAAAAAGGCAACTTCAATTGAAAACATCTACATATCTAGGAATGTCCTGAAACTAATGTGTGGAGTAAACTTCTAGTTTATTGCTGTCCGTCCTGTTGGGCCACAGTGCGAAGGTCAGGCAGATAGTCATCCATTACTGATGGGGGACTCTGGAAATGCCAGTCATCGTGATCACACGATCGACATACTGAGAAATGATGCAACTTTCCCATCAACATCTCATCAGGATAATCATAATAACTTGGATGAGTTGCACCAAACTAGAGGGCCTCTAAATGATGTTCCTCATGTCCCAGAA-AGTTCTGCTAGTGCAACTCCTGCATCTATCTCCCGAAACGCTTCTTTTGCAAGAAGAGATCAAGGACACCGTCAACCAAATCCTTTGAATTCTGGCTTCTGGATCTCAATTGAGCTTATTGTAAGTTTAAGCCAGATTATAGCAGCTATTACTGTCCTGTCAGTATCAAGGAACGAGCATCCTCATGCTCCTTTGGCTCAGTGGCTTATTGGTTATACGATAGGTTGTGTTGCTACTCTTCCTCACCTTTATTGGCGATTTCTCCACCGCAATCGGCAGAACACAGAGCAAGAATCAACAAATCAGGTTTCATCTGAAAGGGACGTATATGAGCCTAATTCTTATGTAGTAGTTTCGTCTGCTCATGGATCAGAAGTTGTGGACAGTGGTAATAATGGTGGAGTAGCAAGGATTGCAAGTCCAAGGGTCTACGCATTGGTTGCGTGCTTCAAATTGGCTCTGGATTGTTTCTTTGCTGTGTGGTTTGTTGTTGGGAATGTGTGGATATTCGGGGGCCGTACTTCTCTCCATGACGCTCCTAACTTGTACAGGCTGTGCATAGTATTCCTTGCATTCGGCTTCATCGGCTATGCCCTGCCTTTCATCCTATGTACAATGATATGCTGCTGCCTACCCTGCATTATCTCCATGATGGGCATCCACGAGGATTTGGATTTTAACAGAGGCGCTACTGCAGAAGCAATCGATGCCTTGGTGGCATACAAGTTCCAATCGAAAAAGTTTCAAGATGGAGAAGCGGGAGAAGATAATGGTGGAGTATTGGCAGCTGGAACAGACAAAGAGCGAACTATTTCTGCAGAAGACGCTGTATGCTGCATCTGCTTGTCAAAGTTCTCAAACAACGAAGATCTACGGGAGCTTCCCTGCAATCATGTTTTCCACTTGGAATGCGTCGATAAATGGCTCAAGATAAACGCACTGTGCCCTCTTTGCAAGGCTGACTTAGGCGGCTCGACGAATGCTCCGGACTCGAGCTCCAGGAGCAGCCATGACAGCAACAACAGCAGAGTCAGGAACGACGTCGAGTCACAACAGTAGCTGCTCTCATGCCCTTTCCCATGAGCATGGGGATGGAACACATTCTTGACAATCTACAAATTGGCATGCAACTTCTCAAGTCCC-TTTTTTTTCAGACAGACTTGAATAGAGCATTTGCCTACACTGCTCTCTGGTGTTAACCCAGAAACTCCTATGAGGCTGAGGCTATGGCTATGAGTTGCTGCCTGCAGTTTGTTCTGAACTGAAGTTGCCTGTAAGGCTGTAACAGATTATAGATGGTGTTGGAATAGTTATCATGATGATCACCTGAGTTGAGCATATTAGGTTGTTGAGGTTAACCTTCAACCGGGGAGGTTCAATGTAATTATCTCCTTGTTTAGGAAAAAATCCCCTCCCCTTTGTATCTGCTCCCTTGTATAGAAAACAACCATCTCCATTGTATATCAGATCAATTTTGCCTGCATTTTGTAAATTCAGTTAGTAGGCAGAGATCTCCCAGCACTCATCAAGTGCTTGAGCAAGTACAGATTAGCAGTTGAGTTTATTCTACTGTAATGCAACACTTATAGATGATATTACCATGACATAATCATTTGAGCCCACATAATATATGGA]

[+] EMBL AK103147             [GAAAGCGTAAGAAAAATAAAAGGAGAAAAAGGAATAGAGAAATTGGGGAAGAGAGCTACCTCGAATCGAAGCTGCGATCTCCACCTGGTGAAATAGGAGAATTGATGAATTGCTGAGATTTGGTGATTAGAGGGACCTTTGCTGCTGAGGCATTGAGGTACACTAAAAGCAAGGGTGTGAAAAAGGCAACTTCAATTGAAAACATCTACATATCTAGGAATGTCCTGAAACTAATGTGTGGAGTAAACTTCTAGTTTATTGCTGTCCGTCCTGTTGGGCCACAGTGCGAAGGTCAGGCAGATAGTCATCCATTACTGATGGGGGACTCTGGAAATGCCAGTCATCGTGATCACACGATCGACATACTGAGAAATGATGCAACTTTCCCATCAACATCTCATCAGGATAATCATAATAACTTGGATGAGTTGCACCAAACTAGAGGGCCTCTAAATGATGTTCCTCATGTCCCAGAA AGTTCTGCTAGTGCAACTCCTGCATCTATCTCCCGAAACGCTTCTTTTGCAAGAAGAGATCAAGGACACCGTCAACCAAATCCTTTGAATTCTGGCTTCTGGATCTCAATTGAGCTTATTGTAAGTTTAAGCCAGATTATAGCAGCTATTACTGTCCTGTCAGTATCAAGGAACGAGCATCCTCATGCTCCTTTGGCTCAGTGGCTTATTGGTTATACGATAGGTTGTGTTGCTACTCTTCCTCACCTTTATTGGCGATTTCTCCACCGCAATCGGCAGAACACAGAGCAAGAATCAACAAATCAGGTTTCATCTGAAAGGGACGTATATGAGCCTAATTCTTATGTAGTAGTTTCGTCTGCTCATGGATCAGAAGTTGTGGACAGTGGTAATAATGGTGGAGTAGCAAGGATTGCAAGTCCAAGGGTCTACGCATTGGTTGCGTGCTTCAAATTGGCTCTGGATTGTTTCTTTGCTGTGTGGTTTGTTGTTGGGAATGTGTGGATATTCGGGGGCCGTACTTCTCTCCATGACGCTCCTAACTTGTACAGGCTGTGCATAGTATTCCTTGCATTCGGCTTCATCGGCTATGCCCTGCCTTTCATCCTATGTACAATGATATGCTGCTGCCTACCCTGCATTATCTCCATGATGGGCATCCACGAGGATTTGGATTTTAACAGAGGCGCTACTGCAGAAGCAATCGATGCCTTGGTGGCATACAAGTTCCAATCGAAAAAGTTTCAAGATGGAGAAGCGGGAGAAGATAATGGTGGAGTATTGGCAGCTGGAACAGACAAAGAGCGAACTATTTCTGCAGAAGACGCTGTATGCTGCATCTGCTTGTCAAAGTTCTCAAACAACGAAGATCTACGGGAGCTTCCCTGCAATCATGTTTTCCACTTGGAATGCGTCGATAAATGGCTCAAGATAAACGCACTGTGCCCTCTTTGCAAGGCTGACTTAGGCGGCTCGACGAATGCTCCGGACTCGAGCTCCAGGAGCAGCCATGACAGCAACAACAGCAGAGTCAGGAACGACGTCGAGTCACAACAGTAGCTGCTCTCATGCCCTTTCCCATGAGCATGGGGATGGAACACATTCTTGACAATCTACAAATTGGCATGCAACTTCTCAAGTCCC TTTTTTTTCAGACAGACTTGAATAGAGCATTTGCCTACACTGCTCTCTGGTGTTAACCCAGAAACTCCTATGAGGCTGAGGCTATGGCTATGAGTTGCTGCCTGCAGTTTGTTCTGAACTGAAGTTGCCTGTAAGGCTGTAACAGATTATAGATGGTGTTGGAATAGTTATCATGATGATCACCTGAGTTGAGCATATTAGGTTGTTGAGGTTAACCTTCAACCGGGGAGGTTCAATGTAATTATCTCCTTGTTTAGGAAAAAATCCCCTCCCCTTTGTATCTGCTCCCTTGTATAGAAAACAACCATCTCCATTGTATATCAGATCAATTTTGCCTGCATTTTGTAAATTCAGTTAGTAGGCAGAGATCTCCCAGCACTCATCAAGTGCTTGAGCAAGTACAGATTAGCAGTTGAGTTTATTCTACTGTAATGCAACACTTATAGATGATATTACCATGACATAATC                        ]
[+] EMBL CB632633             [                   AAGGAG ACCTGGAATAGAGAAATTGGGGAAGAGAGCTACCTCGAATCGAAGCTGCGATCTCCACCTGGTGAAATAGGAGAATTGATGAATTGCTGAGATTTGGTGATTAGAGGGACCTTTGCTGCTGAGGCATTGAGGTACACTAAAAGCAAGGGTGTGAAAAAGGCAACTTCAATTGAAAACATCTACATATCTAGGAATGTCCTGAAGCTAATGTGTGGAGTAAACTTCTAGTTTATTGCTGTCCGTCCTGTTGGGCCACAGTGCGAAGGTCAGGCAGATAGTCATCCATTACTGATGGGGGACTCTGGAAATGCCAGTCATCGTGATCACACGATCGACATACTGAGAAATGATGCAACTTTCCCATCAACATCTCATCAGGATAATCATAATAACTTGGATGAGTTGCACCAAACTAGAGGGCCTCTAAATGATGTTCCTCATGTCCCAGAANAG TCTGCTAGTGCAACTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB632634             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCGAACTATTTCTGCAGAAGACGCTGTATGCTGCATCTGCTTGTCAAAGTTCTCAAACAACGAAGATCTACGGGAGCTTCCCTGCAATCATGTTTTCCACTTGGAATGCGTCGATAAATGGCTCAAGATAAACGCACTGTGCCCTCTTTGCAAGGCTGACTTAGGCGGCTCGACGAATGCTCCGGACTCGAGCTCCAGGAGCAGCCATGACAGCAACAACAGCAGAGTCAGGAACGACGTCGAGTCACAACAGTAGCTGCTCTCATGCCCTTTCCCATGAGCATGGGGATGGAACACATTCTTGACAATCTACAAATTGGCATGCAACTTCTCAAGTCCCTTTTTTTTTCAGACAGACTTGAATAGAGCATTTGCCTACACTGCTCTCTGGTGTTAACCCAGAAACTCCTATGAGGCTGAGGCTATGGCTATGAGTTGCTGCCTGCAGTTTGTTCTGAACTGAAGTTGCCTGTAAGGCTGTAACAGATTATAGATGGTGTTGGAATAGTTATCATGATGATCACCTGAGTTGAGCATATTAGGTTGTTGAGGTTAACCTTCAACCGGGGAGGTTCAATGTAATTATCTCCTTGTTTAGGAAAAAATCCCCTCCCCTTTGTATCTGCTCCCTTGTATAGAAAACAACCATCTCCATTGTATATCAGATCAATTTTGCCTGCATTTTGTAAATTCAGTTAGTAGGCAGAGATCTCCCAGCACTCATCAAGTGCTTGAGCAAGTACAGATTAGCAGTTGAGTTTATTCTACTGTAATGCAACACTTATAGATGGTATTACCATGACATAATCATTTGAGCCCACATAATATATGGA]




>consensus_5920#0
GAAAGCGTAAGAAAAATAAAAGGAGAAAAAGGAATAGAGAAATTGGGGAAGAGAGCTACC
TCGAATCGAAGCTGCGATCTCCACCTGGTGAAATAGGAGAATTGATGAATTGCTGAGATT
TGGTGATTAGAGGGACCTTTGCTGCTGAGGCATTGAGGTACACTAAAAGCAAGGGTGTGA
AAAAGGCAACTTCAATTGAAAACATCTACATATCTAGGAATGTCCTGAAACTAATGTGTG
GAGTAAACTTCTAGTTTATTGCTGTCCGTCCTGTTGGGCCACAGTGCGAAGGTCAGGCAG
ATAGTCATCCATTACTGATGGGGGACTCTGGAAATGCCAGTCATCGTGATCACACGATCG
ACATACTGAGAAATGATGCAACTTTCCCATCAACATCTCATCAGGATAATCATAATAACT
TGGATGAGTTGCACCAAACTAGAGGGCCTCTAAATGATGTTCCTCATGTCCCAGAAAGTT
CTGCTAGTGCAACTCCTGCATCTATCTCCCGAAACGCTTCTTTTGCAAGAAGAGATCAAG
GACACCGTCAACCAAATCCTTTGAATTCTGGCTTCTGGATCTCAATTGAGCTTATTGTAA
GTTTAAGCCAGATTATAGCAGCTATTACTGTCCTGTCAGTATCAAGGAACGAGCATCCTC
ATGCTCCTTTGGCTCAGTGGCTTATTGGTTATACGATAGGTTGTGTTGCTACTCTTCCTC
ACCTTTATTGGCGATTTCTCCACCGCAATCGGCAGAACACAGAGCAAGAATCAACAAATC
AGGTTTCATCTGAAAGGGACGTATATGAGCCTAATTCTTATGTAGTAGTTTCGTCTGCTC
ATGGATCAGAAGTTGTGGACAGTGGTAATAATGGTGGAGTAGCAAGGATTGCAAGTCCAA
GGGTCTACGCATTGGTTGCGTGCTTCAAATTGGCTCTGGATTGTTTCTTTGCTGTGTGGT
TTGTTGTTGGGAATGTGTGGATATTCGGGGGCCGTACTTCTCTCCATGACGCTCCTAACT
TGTACAGGCTGTGCATAGTATTCCTTGCATTCGGCTTCATCGGCTATGCCCTGCCTTTCA
TCCTATGTACAATGATATGCTGCTGCCTACCCTGCATTATCTCCATGATGGGCATCCACG
AGGATTTGGATTTTAACAGAGGCGCTACTGCAGAAGCAATCGATGCCTTGGTGGCATACA
AGTTCCAATCGAAAAAGTTTCAAGATGGAGAAGCGGGAGAAGATAATGGTGGAGTATTGG
CAGCTGGAACAGACAAAGAGCGAACTATTTCTGCAGAAGACGCTGTATGCTGCATCTGCT
TGTCAAAGTTCTCAAACAACGAAGATCTACGGGAGCTTCCCTGCAATCATGTTTTCCACT
TGGAATGCGTCGATAAATGGCTCAAGATAAACGCACTGTGCCCTCTTTGCAAGGCTGACT
TAGGCGGCTCGACGAATGCTCCGGACTCGAGCTCCAGGAGCAGCCATGACAGCAACAACA
GCAGAGTCAGGAACGACGTCGAGTCACAACAGTAGCTGCTCTCATGCCCTTTCCCATGAG
CATGGGGATGGAACACATTCTTGACAATCTACAAATTGGCATGCAACTTCTCAAGTCCCT
TTTTTTTCAGACAGACTTGAATAGAGCATTTGCCTACACTGCTCTCTGGTGTTAACCCAG
AAACTCCTATGAGGCTGAGGCTATGGCTATGAGTTGCTGCCTGCAGTTTGTTCTGAACTG
AAGTTGCCTGTAAGGCTGTAACAGATTATAGATGGTGTTGGAATAGTTATCATGATGATC
ACCTGAGTTGAGCATATTAGGTTGTTGAGGTTAACCTTCAACCGGGGAGGTTCAATGTAA
TTATCTCCTTGTTTAGGAAAAAATCCCCTCCCCTTTGTATCTGCTCCCTTGTATAGAAAA
CAACCATCTCCATTGTATATCAGATCAATTTTGCCTGCATTTTGTAAATTCAGTTAGTAG
GCAGAGATCTCCCAGCACTCATCAAGTGCTTGAGCAAGTACAGATTAGCAGTTGAGTTTA
TTCTACTGTAATGCAACACTTATAGATGATATTACCATGACATAATCATTTGAGCCCACA
TAATATATGGA
clustalw multiple alignements is not computed in this case