cluster # 5926

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Oryza sativa
cluster # 5926 cluster # 5926 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5926#0 length = 444 sequences # 3

consensusID : consensus_5926#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 444
fasta sequence

                              [GTTGTTCAAAAATTTTCCCATAGGCACTTGTGGAATGTGCCCGAAGAAGAAAATGATGACCTGCCGGCCCAGGCAGAGCATGAATTGTCATACCAAGATGATGAGCAAGAAAATACTAGTTTTCAGGTTGCAGATCTTGAGAGAGCTTCAATCAACGAGCAGCCTAGCAATTATGAAGATGGTATTTGTGTTCAGGCTTCCCTAGTTGATCAGATCCAGAGGGAAAGGGAATTGGAAGTTGAA-GAAAATGGCTTTGAAGATGATGCTGAC-GAAACTGTNAGACAATA-TGACAGTNAAAAT-GAAGGGCCAATCCATGATGATGGTGAATATAGTGATTTTGAGTAAAATATCTGTGTATGGCTAAGTCCCACCATAACCTGCTGTTAGACCATGGCTGTCAGTTTAAATTGTGTCTGAGGGTTTGATTNTTGTGTATTATGTTGT]

[+] EMBL OSC27441             [GTTGTTCAAAAATTTTCCCATAGGCACTTGTGGAATGTGCCCNAAGAAGAAAATNATGACCTGCCGGCCCAGGCAGANCATGAATTGTCATACCAAGATGATGAGCAAGAAAATACTAGTTTTCAGGTTGCAGATCTTGAGAGAGCTTCAATCAACGAGCAGCCTAGCAATTATGAAGATGGTATTTGTGTTCAGGCTTCCCTAGTTGATCAGATCCAGAGGGAAAGGGAATTGGAAGTTGAA GAAAATGGCTTTGAAGATGATGCTGAC GAAACTGTNAGACAATA TGACAGTNAAAAT GAAGGGCCAATCCATGATGNTGGTGAATATAGTGATTTTGAGTAAAATATCTGTGTATGGCTAAGTCCCACCATAACCTGCTGTTAGACCATGGCTGTCAGTTTAAATTGTGTCTGAGGGTTTGATTNTTGTGTATTATGTTGT]
[+] EMBL OSC28151             [GTTGTTCAAAAATTTTCCCATAGGCACTTGTGGAATGTGCCCGAAGAAGAAAATGATGACCTGCCGGCCCAGGCAGAGCATGAATTGTCATACCAAGATGATGAGCAAGAAAATACTAGTTTTCAGGTTGCAGATCTTGAGAGAGCTTCAATCAACGAGCAGCCTAGCAATTATGAAGATGGTATTTGTGTTCAGGCTTCCCTAGTTGATCAGATCCAGAGGGAAAGGGAATTGGAAGTTGAA GAAAATGGCTTTGAAGATGATGCTGAC GAAACTGTNAGACAATA TGNCAGTNAAAAT GAAGGGCCAATCCATGATGATGGTGAATATAGTGATTTTGAGT AAATATCTGTGTATGGCTAAGTCCCA CATAACCTGCTGTTAGGACATGGCTGTCAGTTa                                        ]
[+] EMBL OSC24272             [GTTGTTCAAAAATTTTCCCATAGGCACTTGTGGAATGTGCCCGAAGAAGAAAATGATGACCTGCCGGCCCAGGCAGAGCATGAATTGTCATACCAAGATGATGAGCAAGAAAATACTAGTTTTCAGGTTGCAGATCTTGAGAGAGCTTCAATCAACGAGCAGCCTAGCAATTATGAAGATGGTATTTGTGTTCAGGCTTCCCTAGTTGATCAGATCCAGAGGGAAAGGGAATTGGAAGTTGAAGGAAAATGGCTTTGAAGATGATGCTGACGGAAACTGTGAGACAATATTGACAGTNAAAATGGAGGGGCCAATCCATGATGATGGTGAATATAGTGA                                                                                                             ]




>consensus_5926#0
GTTGTTCAAAAATTTTCCCATAGGCACTTGTGGAATGTGCCCGAAGAAGAAAATGATGAC
CTGCCGGCCCAGGCAGAGCATGAATTGTCATACCAAGATGATGAGCAAGAAAATACTAGT
TTTCAGGTTGCAGATCTTGAGAGAGCTTCAATCAACGAGCAGCCTAGCAATTATGAAGAT
GGTATTTGTGTTCAGGCTTCCCTAGTTGATCAGATCCAGAGGGAAAGGGAATTGGAAGTT
GAAGAAAATGGCTTTGAAGATGATGCTGACGAAACTGTNAGACAATATGACAGTNAAAAT
GAAGGGCCAATCCATGATGATGGTGAATATAGTGATTTTGAGTAAAATATCTGTGTATGG
CTAAGTCCCACCATAACCTGCTGTTAGACCATGGCTGTCAGTTTAAATTGTGTCTGAGGG
TTTGATTNTTGTGTATTATGTTGT

clustalw multiple alignements is not computed in this case