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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5936 cluster # 5936       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5936#0 length = 810 sequences # 3  

consensusID : consensus_5936#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 810
fasta sequence
                              [TCTTTTTAAGTTTGGCAGAATTCCTCCATTTTTTACTGTTCTCTATTGAAACGACTGCGTGATTACCACTAGTGCTTTATACACATTCCTCATTCATTCCTTCTCTCTCCACCAATAGCTGACGCAAATTGTTTGGCAAAAAGAAAAAACAACTAGTACTCCACTTTTATCAGAAATCACCACGGAAAGTGCCAAGGCAGATGGGCTGGCACCACAAAAACAATGACAACATCGATCGATGCTACACCAACATGGCGGTCTTCTCTATTATCCTTCCACCGCTTCGTCTCTTGTTTTCAAGTATACTGTGCATATGTACAGATTCCCGTGAGTATACGGATTTTTTTTGGACTTCTAATGAATATATAAAGTTCCATCACCCATAATTACGAGAAGTTCATGGTTGAAAAACATCTAGTTCCCCAGGGCGATTTCTCAACTTCAGTTTCCACTTTTTCATCATTCCGAGCCCCCCTTCAATAACTTGTAAATATACTTCTTCCTCAGCTTGATAGCCATGCGTACGCATCTTTTTACATTGATCTTCAGCATATTATCATTGAACATCTTGATTGCATCATCTATTGAGCGAGTTTCTCTAATTATCTTGTGGCGATTGATTACAAGGATTGCTGCTACGCAGAATATAGGCAGATCATCATCTCCATTCTTTGCTAACACATTTGTGCTTATATGTGGCATCTGCTGATGTCTTGCCCAAATAGTAGCTCCTGACAAGCCACAGAGGGGATTTCTTGTATTGGGTTTCATTCCAAGGTTGCAAGCTACACGCATTTCACCATTTCTATG]

[+] EMBL CB671732             [TCTTTTTAAGTTTGGCAGAATTCCTCCATTTTTTACTGTTCTCTATTGAAACGACTGCGTGATTACCACTAGTGCTTTATACACATTCCTCATTCATTCCTTCTCTCTCCACCAATAGCTGACGCAAATTGTTTGGCAAAAAGAAAAAACAACTAGTACTCCACTTTTATCAGAAATCACCACGGAAAGTGCCAAGGCAGATGGGCTGGCACCACAAAAACAATGACAACATCGATCGATGCTACACCAACATGGCGGTCTTCTCTATTATCCTTCCACCGCTTCGTCTCTTGTTTTCAAGTATACTGTGCATATGTACAGATTCCCGTGAGTATACGGATTTTTTTTGGACTTCTAATGAATATATAAAGTTCCATCACCCATAATTACGAGAAGTTCATGGTTGAAAAACATCTAGTTCCCCAGGGCGATTTCTCAACTTCAGTTTCCACTTTTTCATCATTCCGAGCCCCCCTTCAATAACTTGTAAATATACTTCTTCCTCAGCTTGATAGCCATGCGTACGCATCTTTTTACATTGATCTTCAGCATATTATCATTGAACATCTTGATTGCATCATCTATTGAGCGAGTTTCTCTAATTATCTTGTGGCGATTGATTACAAGGATTGCTGCTACGCAGAATATAGGCAGATCATCATCTCCATTCTTTGCTAACACATTTGTGCTTATATGTGGCATCTGCTGATGTCTTGCCCAAATAGTAGCTCCTGACAAGCCACAGAGGGGATTTCTTGTATTGGGTTTCATTCCAAGGTTGCAAGCTACACGCATTTCACCATTTCTATG]
[+] EMBL CA762289             [   TTTTTTTTTTGGCAGAATTCCTCCATTTTTTACTGTTCTGTATTGAAACGACTGCGTGATTACCACTAGTGCTTTATACACATTCCTCATTCATTCCTTCTCTCTCCACCAATAGCTGACGCAAATTGTTTGGCAAAAAGAAAAGACAACTAGTACTCCACTTTTATCAGAAATCACCACGGAAAGTGCCAAGGCAGATGGGCTGGCACCACAAAAACAATGACAACATCGATCGATGCTACACCAACATGGCGGTCTTCTCTATTATCCTTCCACCGCTTCGTCTCTTGTTTTCAAGTATACTGTGCATATGTACAGATTCCCGTGAGTATACGGA TTTTTTTGGACTTCTAATGAATATATAAAGTTCCATCACCCATAATTACAAGAAGTTCATGGTTGAAAAACATCTAGTTCCCCAGGGCGATTTCTCAACTTCAGTTTCCACTTTTTCATCATTCCGAGCCCCCCTTCAATAACTTGTAAATATACTTCTTCCTCAGCTTGATAGCCATGCGTACGCATCTCTTTACATTGATCTTCACCATATTATCATTGAACATCTTGATTGCATCATCTATTGAGCGAGTTTCTCTAATTATCTTGGGGCGATCGATTACAAGGATTGCTGCTACGCACAATATAGGCGGATCATCATCTCCATTCTTTGCTAca                                                                                                                                   ]
[+] EMBL CB681516             [                                                                                ACACATTCCTCATTNATTCCCCTTCTCTCCACCAATAGCTGACGCAAATTGTTTGGCAAAAAGAAAAAACAACTAGTACTCCACTTTTATCCCAAATCACCACGGAAAGTGCCAAGGCAGATGGGCTGGCACCACAAAAACAATGACAACATCGATCGATGCTACACCAACATGGCGGTCTTCTCTATTATCCTTCCACCGCTTCGTCTCTTGTTTTCAAGTATACTGTGCATATGTACAGATTCCCGTGAGTATACGGATTTTTTTTGGACTTCTAATGAATATATAAAGCTCCATCACCCATAATTACGAGAAGTTCATGGGTGAAAAACATCTAGTTCCCCAGGGCGATTTCTCAACTTCAGTTTCCACTTTTTCATCATTCCGAGCCCCCCTTCAATAACTTGTAAATATACTTCTTCCTCAGCTTGATAGCCATGCGTACGCATCTTTTTACATTGATCTTCAGCATATTATCATTGAACATCTTGATTGCATCATCTATTGAGCGAGTTTCTCTAATTATCTTGTGGCGATTGATTACAAGGATTGCTGCTACGCAGAATATAGGCAGATCATCATCTCCATTCTTTGCTAACACATTTGTGCTTATATGTGGCATCTGCTGATGTCTTGCCCAAATAGTAGCTCCTGACAAGCCACAGAGGGGATTT                                                        ]


>consensus_5936#0 TCTTTTTAAGTTTGGCAGAATTCCTCCATTTTTTACTGTTCTCTATTGAAACGACTGCGT GATTACCACTAGTGCTTTATACACATTCCTCATTCATTCCTTCTCTCTCCACCAATAGCT GACGCAAATTGTTTGGCAAAAAGAAAAAACAACTAGTACTCCACTTTTATCAGAAATCAC CACGGAAAGTGCCAAGGCAGATGGGCTGGCACCACAAAAACAATGACAACATCGATCGAT GCTACACCAACATGGCGGTCTTCTCTATTATCCTTCCACCGCTTCGTCTCTTGTTTTCAA GTATACTGTGCATATGTACAGATTCCCGTGAGTATACGGATTTTTTTTGGACTTCTAATG AATATATAAAGTTCCATCACCCATAATTACGAGAAGTTCATGGTTGAAAAACATCTAGTT CCCCAGGGCGATTTCTCAACTTCAGTTTCCACTTTTTCATCATTCCGAGCCCCCCTTCAA TAACTTGTAAATATACTTCTTCCTCAGCTTGATAGCCATGCGTACGCATCTTTTTACATT GATCTTCAGCATATTATCATTGAACATCTTGATTGCATCATCTATTGAGCGAGTTTCTCT AATTATCTTGTGGCGATTGATTACAAGGATTGCTGCTACGCAGAATATAGGCAGATCATC ATCTCCATTCTTTGCTAACACATTTGTGCTTATATGTGGCATCTGCTGATGTCTTGCCCA AATAGTAGCTCCTGACAAGCCACAGAGGGGATTTCTTGTATTGGGTTTCATTCCAAGGTT GCAAGCTACACGCATTTCACCATTTCTATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)