cluster # 5938

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Oryza sativa
cluster # 5938 cluster # 5938 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5938#0 length = 757 sequences # 3

consensusID : consensus_5938#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 757
fasta sequence

                              [CGAAGAAGGGGAAGCCGAAGATGGCGCCGATCGAGCTCCCGGCGCCGCCGGAGCAGGCGCAGTCCATCACGCGCACCATCTTCGACGTCGTCAGGGAGCACGGCCCGCTCACCATCTCCGACGTCTGGGACCACGTCAAGGACGTTGGGCTGAGGGGCCTGACGAGCAAGAGGCAGATGAAGATCATGATGCGGTGGATGCGGGAGAAGCAGAAGCTCCGCCTCATCTGCGACCACGACGGGCCGCACAAGCAGTTCCTCTACACCACCTGGTTCACCAATCCCAAGAACGCGCCGCAGAGGCCCAAGAGAGATCATCATCGGCAGCAGCAGCAGCAGCAGCAGTTCAGGGGAGAGCCTCGCAAACCATGAAGGACGGGACGGCAAGAACAATGAAGCTGATGAATGCAAAGCTTGCCATCTGCCGTCCAG-TGAGATTCTTCAGCACTTGTGC-TTCTCTGTGTCCTTCTGC-TTGAGTGCTCTCGTTTGGGCGACCAATGCATAG-TTTATTGGGATCTTCGAACACAATAATTTTGCAG-AATTTTCACCGGATAACAGGACTTAGTTCAAATCTTCCAAAAATCCTGTAAAATTTCCTCAGGGGCCAGGTGACTAGTACCGCTTTTGCTAGGCAGGATCTTTTCTGTAGTTTGCTTGGGGAAAGAATTTCAGCACATGTTTTTGTACCCTCGTAACCTCGCCCTTAAAAGGTATAGTAACTTTGTAACAGTGATGTAGAACTAGATAGTACAGCATCC]

[+] EMBL AK111240             [CGAAGAAGGGGAAGCCGAAGATGGCGCCGATCGAGCTCCCGGCGCCGCCGGAGCAGGCGCAGTCCATCACGCGCACCATCTTCGACGTCGTCAGGGAGCACGGCCCGCTCACCATCTCCGACGTCTGGGACCACGTCAAGGACGTTGGGCTGAGGGGCCTGACGAGCAAGAGGCAGATGAAGATCATGATGCGGTGGATGCGGGAGAAGCAGAAGCTCCGCCTCATCTGCGACCACGACGGGCCGCACAAGCAGTTCCTCTACACCACCTGGTTCACCAATCCCAAGAACGCGCCGCAGAGGCCCAAGAGAGATCATCATCGGCAGCAGCAGCAGCAGCAGCAGTTCAGGGGAGAGCCTCGCAAACCATGAAGGACGGGACGGCAAGAACAATGAAGCTGATGAATGCAAAGCTTGCCATCTGCCGTCCAG TGAGATTCTTCAGCACTTGTGC TTCTCTGTGTCCTTCTGC TTGAGTGCTCTCGTTTGGGCGACCAATGCATAG TTTATTGGGATCTTCGAACACAATAATTTTGCAG AATTTTCACCGGATAACAGGACTTAGTTCAAATCTTCCAAAAATCCTGTAAAATTTCCTCAGGGGCCAGGTGACTAGTACCGCTTTTGCTAGGCAGGATCTTTTCTGTAGTTTGCTTGGGGAAAGAATTTCAGCACATGTTTTTGTACCCTCGTAACCTCGCCCTTAAAAGGTATAGTAACTTTGTAACAGTGATGTAGAACTAGATAGTACAGCATCC]
[+] EMBL AU162635             [CGAAGAAGGGGAAGCCGAAGATGGCGCCGATCGAGCTCCCGGCGCCGCC GAGCAGGCGCAGTCCATCACGCGCACCATCTTCGACGTCGTCAGGGAGCACGGCCCGCTCACCATCTCCGACGTCTGGGACCACGTCAAGGACGTTGGGCTGAGGGGCCTGACGAGCAAGAGGCAGATGAAGATCATGATGCGGTGGATGCGGGAGAAGCAGAAGCTCCGCCTCATCTGCGACCACGACGGGCCGCACAAGCAGTTCCTCTACACCACCTGGTTCACCAATCCCAAGAACGCGCCGCAGAGGCCCAAGAGAGATCATCATCGGCAGCAGCAGCAGCAGCAGCAGTTCAGGGGAGAGCCTCGCAAACCATGAAGGACGGGACGGCAAGAACAATGAAGCTGATGAATGCAAAGCTTGCCATCTGCCGTCCAGTTGAGATTCTTCAGCAATTGTGCTTTCTCTGTGTCCTTCTGCTTTGAGTGTTCTCGTTTGGGGGACCAATGCATAGTTTTATTGGGATCTTCGAACACAATAATTTT CAGAAATTTTCACCG                                                                                                                                                                                                                ]
[+] EMBL AU071199             [                                                                                                                                                                                                                                      GACCACGACGGGCCGCACAAGCAGTTCCTCTACACCACCTGGTTCACCAATCCCAAGAACGCGCCGCAGAGGCCCAAGAGAGATCATCATCGGCAGCAGCAGCAGCAGCAGCNGTTCAGGGGAGAGCCTCGCAAACCATGAAGGACGGGACGGCAAGAACAATGAAGCTGATGAATGCAAAGCTTGCCATCTGCCGTCCAG TGAGATTCTTCAGCACTTGTGC TTCTCTGTGTCCTTCTGC TTGAGTGCTCTCGTTTGGGCGACCAATGCATAG TTTATTGGGATCTTCGAACACAATAATTTTGCAG AATTTTCACCGGATAACAGGACTTAGTTCAAATCTTCCAAAAATCCTGTAAAATTTCCTCAGGGGCCAGGTGACTAGTACCGCTTTTGCTAGGCAGGATCTTTTCTGTAGTTTGCTTGGGGAAAGAATTTCAGCACATGTTTTTGTACCCTCGTAACCTCGCCCTTAAAAGGTATAGTAACTTTGTAACAGTGATGTAAAAaaaaa             ]




>consensus_5938#0
CGAAGAAGGGGAAGCCGAAGATGGCGCCGATCGAGCTCCCGGCGCCGCCGGAGCAGGCGC
AGTCCATCACGCGCACCATCTTCGACGTCGTCAGGGAGCACGGCCCGCTCACCATCTCCG
ACGTCTGGGACCACGTCAAGGACGTTGGGCTGAGGGGCCTGACGAGCAAGAGGCAGATGA
AGATCATGATGCGGTGGATGCGGGAGAAGCAGAAGCTCCGCCTCATCTGCGACCACGACG
GGCCGCACAAGCAGTTCCTCTACACCACCTGGTTCACCAATCCCAAGAACGCGCCGCAGA
GGCCCAAGAGAGATCATCATCGGCAGCAGCAGCAGCAGCAGCAGTTCAGGGGAGAGCCTC
GCAAACCATGAAGGACGGGACGGCAAGAACAATGAAGCTGATGAATGCAAAGCTTGCCAT
CTGCCGTCCAGTGAGATTCTTCAGCACTTGTGCTTCTCTGTGTCCTTCTGCTTGAGTGCT
CTCGTTTGGGCGACCAATGCATAGTTTATTGGGATCTTCGAACACAATAATTTTGCAGAA
TTTTCACCGGATAACAGGACTTAGTTCAAATCTTCCAAAAATCCTGTAAAATTTCCTCAG
GGGCCAGGTGACTAGTACCGCTTTTGCTAGGCAGGATCTTTTCTGTAGTTTGCTTGGGGA
AAGAATTTCAGCACATGTTTTTGTACCCTCGTAACCTCGCCCTTAAAAGGTATAGTAACT
TTGTAACAGTGATGTAGAACTAGATAGTACAGCATCC

clustalw multiple alignements is not computed in this case