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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5943 cluster # 5943       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5943#0 length = 661 sequences # 3  

consensusID : consensus_5943#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 661
fasta sequence
                              [NTNCGTACCAGTTCTGAGTCGGCTNTTCGACNNCCAGGGAANGCCCCCGAGCGAATNCACCNGTNCCTATCCNCCNGCCGGCACGCNNNGCCCGNTCTNGCCGGCGNNAGCTCGAGCAGTCCGCCGGCAGCCNACGGGTTCGGGGCCGGGACCCCCGAGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTGCCGACTTCCCTTGCCTACATT-TTCCATTGGCCAGAGGTG-TTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCANCCGGACACCGCGCGACGTGGTGCNTNCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAAATCTTAACCCGATTNCCTTTCGGGGCACGCGCGTGGGTCGGT-CCTTCTTGCCCGGGGGTTAACCCG-TCCC-TTAGGATCGGCTTANCCA-TGTGCAAAGTGCCGTTCAAATGGAACCTTTTTTCCTCTTTNGGCCTTAAAAGTTCTAATTTGAATA]

[+] EMBL AU069197             [NTNCGTACCAGTTCTGAGTCGGCTNTTCGACNNCCAGGGAANGCCCCCGAGCGAATNCACCNGTNCCTATCCNCCNGCCGGCACGCNNNGCCCGNTCTNGCCGGCGNNAGCTCGAGCAGTCCGCCGGCAGCCNACGGGTTCGGGGCCGGGACCCCCGAGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCGTTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGTGTTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTNCTCCGGA                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU100887             [                                                                                                                                                                                                                              TACATT ATCCATTGGCCAGAGGTG TTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCNGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCANCCGGACACCGCGCGACGTGGTGCNTNCTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAAATCTTAACCCGATTNCCTTTCGGGGCACGCGCGTGGGTCGGT CCTTCTTGCCCGGGGGTTAACCCG TCCC TTAGGATCGGCTTANCCA TGTGCAAAGTGCCGTTCAAATGGAACCTTTTTTCCTCTTTNGGCCTTAAAAGTTCTAATTTGAATA]
[+] EMBL AU163148             [                                                                                                                                                                                                                                             GCCAGA NTGNTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCAGCCGGACACCGCGCGACGTGGTGCGTACTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGNCGTCTCCGGACTTCCTAACGTCGCCGTCAACCGCCACGTCCCGGCTCGGGAAAATCTTAACCCGATTCCCTTTCGGGGCACGNGCGTGGGTCGGTNCCTTC TGCCCGGGGGTTAACCCGNTCCCTTTAGGATCGGCTTAACCATTGTGCAAAGTGCCGTTNAAAa                                             ]


>consensus_5943#0 NTNCGTACCAGTTCTGAGTCGGCTNTTCGACNNCCAGGGAANGCCCCCGAGCGAATNCAC CNGTNCCTATCCNCCNGCCGGCACGCNNNGCCCGNTCTNGCCGGCGNNAGCTCGAGCAGT CCGCCGGCAGCCNACGGGTTCGGGGCCGGGACCCCCGAGCCCAGCCCTCAGAGCCAATCC TTTTCCCGAAGTTACGGATCCGTTTTGCCGACTTCCCTTGCCTACATTTTCCATTGGCCA GAGGTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGTACTC GGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCANCCGGACACCGCGCGACGTGGTGCNTN CTTCCGGCCGCTGGACCCTACCTCCGGCTGAACCGTTTCCAGGGTTGGCGGGCCGTTAAG CAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGGCGTCTCCGGACTTCCTAACGTCGCCG TCAACCGCCACGTCCCGGCTCGGGAAAATCTTAACCCGATTNCCTTTCGGGGCACGCGCG TGGGTCGGTCCTTCTTGCCCGGGGGTTAACCCGTCCCTTAGGATCGGCTTANCCATGTGC AAAGTGCCGTTCAAATGGAACCTTTTTTCCTCTTTNGGCCTTAAAAGTTCTAATTTGAAT A



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)