Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5946 cluster # 5946       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5946#0 length = 1836 sequences # 2  
consensus_5946#1 length = 429 sequences # 1  

consensusID : consensus_5946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1836
fasta sequence
                              [GGAGTATTTTTCGATCTGAACCAAACAAGCACATAACCAAAACCTCAAAACATGTGTAGCCAAGTTGGCTAGCTTTCACCGAGTACAGTATATACCCTACTACGGATATTGGCCGTCTGAATTGTTCTTCAGCTCATTCCAAGACGTCAAATGCTGGACAAATTCATCGATGCACCTCTCTTCGCGCTCCCTGTCCGCCACGATCTCCTGCAGCTTCCGGGCATTGGCGAAGAACGTCTTCCCCTCTTCCTCCACCACGACGGCGCGGACGGCTCCGGCGACGCCGCCTCGGTCGAACGACCCGTCCTCGTCGTTCCTCGGCACCGCCACTCCGAGCTTCCTCCCCTCGAGAATCCGCGCGTTCGGGCCTTGGTCGCCTAAGATCGGCAGCATGATCAGCGGGTGCCCGAACTGGAGCCCCTCGACGACGGAGCCCCACCCGCAGTGCGTCAGGAACGCGCACACGGCGGCGTGCGCCAGTATGCTCACCTGAGGAGCCCACCGCGTCGTGACCAGCCCGCGCTCGCCGGTGCGGCCCAGGAACCCCGCTGGTAGGACGCTGTCCGCGTCGACGCCGGCGGGCTTCCTCATGGCCCAGAGGAAGCGCGTCCCGGCGAGGTCCAGCCCGTGAGCCAGCTCGCGCAGCAGGTCCGCGCTCATCGGCGCCTCGCTTCCCAGCGCGACGTAGACGACCGACTTGGCCGGCTGAGCGTCGAGCCACTGCATGATTGCGTCGTGCTTGCCGTTCTTGCTGACGCCGCGGGCGCCGTCCGGCCGTGGCGGGAGCAGGCCGAACGGGACGACCGGCTTGCCGTAGAACCTCGTCAGGATCGTGAACGCGCCGGGCTCCAGCTCGGGGCAGCTCCGCATTGCGACGAGCTTGGACCTCTGCAGCGTCAGGCTGTAGCGGGTCATGATGGACACCCCCGAGGCGCCTTCCGTCGCGAACTCCTCCGTGGCGCGCTTCGCCTCGAAGCTCGGCGCCGCCGTGCCCATGGACCGGACTATCGCCTCGCGCTGGTCCGCGCTCGACTCGGTTGGCGGAGCAGACGAGGCCACGACGGCTGCGGAGCAGGGGAGGATCATGGCGCACGGCACCCCGCGCTCCTGAGATGCCAGAGCGACCCAGTGATGCATGAGATCGGCGAGAACCCAATCCGGCCTCTTGCCGCCGGCGCACGCGGTGTCGAGGAACGCGGAGAACGGCGCGGCGAGCCCGTCGAACGCCTTCCTGTGAAGCTCGAACTTGTCGAACGGGACGTCGCTGGTGGCCTCGGCGCCGTCGGGGAGCCCGTCGACGCGCGGCAGTGGGAGCGCCACGAGGTCGACGAGCTCTGCCAGCTCGGGGCGAACCGGCGGGAGGCGGGCGAGGTTGCGCGGGGTGGAGACGAAGGACACGCGGTGGCCGCGCGCGGCGAGGCGCTCGGCGAGGTCAAGGCAGGGGAGCAGGTGGCCGAAGGCGAGCCACGGGAAGATGACGACGTGCAGCGGCGACTGCGAGGAATGGGCGTCGTCCATTTTCGGCCGGCGCGCACCGGTCAGCACTCAGGCGTCAGCGTGTGTGTGAGAAGTTTGGCTCTGATGATCCAGTCATGAGTGTATAGGGAGTACTCCGTATGCAAATCGTGCTAGTTAAAGGGGAGAAAACGAGGAAAGATTCCCGAACGCGATGCGTATTGTCGAGCCCAGCCGAGTGCGAGGCAGCCGGGACTACTCATCTCCTCCCTCCATCTACTACCTCCCTCAAAAAAAAAAAAAAACTTTTATCCAGATTCATTATTTTAGGAGGAAACCCCTCCTTAGAGCAGGTATAATAGAGTATGATAAGCCAGCGAT]

[-] EMBL AK064270             [GGAGTATTTTTCGATCTGAACCAAACAAGCACATAACCAAAACCTCAAAACATGTGTAGCCAAGTTGGCTAGCTTTCACCGAGTACAGTATATACCCTACTACGGATATTGGCCGTCTGAATTGTTCTTCAGCTCATTCCAAGACGTCAAATGCTGGACAAATTCATCGATGCACCTCTCTTCGCGCTCCCTGTCCGCCACGATCTCCTGCAGCTTCCGGGCATTGGCGAAGAACGTCTTCCCCTCTTCCTCCACCACGACGGCGCGGACGGCTCCGGCGACGCCGCCTCGGTCGAACGACCCGTCCTCGTCGTTCCTCGGCACCGCCACTCCGAGCTTCCTCCCCTCGAGAATCCGCGCGTTCGGGCCTTGGTCGCCTAAGATCGGCAGCATGATCAGCGGGTGCCCGAACTGGAGCCCCTCGACGACGGAGCCCCACCCGCAGTGCGTCAGGAACGCGCACACGGCGGCGTGCGCCAGTATGCTCACCTGAGGAGCCCACCGCGTCGTGACCAGCCCGCGCTCGCCGGTGCGGCCCAGGAACCCCGCTGGTAGGACGCTGTCCGCGTCGACGCCGGCGGGCTTCCTCATGGCCCAGAGGAAGCGCGTCCCGGCGAGGTCCAGCCCGTGAGCCAGCTCGCGCAGCAGGTCCGCGCTCATCGGCGCCTCGCTTCCCAGCGCGACGTAGACGACCGACTTGGCCGGCTGAGCGTCGAGCCACTGCATGATTGCGTCGTGCTTGCCGTTCTTGCTGACGCCGCGGGCGCCGTCCGGCCGTGGCGGGAGCAGGCCGAACGGGACGACCGGCTTGCCGTAGAACCTCGTCAGGATCGTGAACGCGCCGGGCTCCAGCTCGGGGCAGCTCCGCATTGCGACGAGCTTGGACCTCTGCAGCGTCAGGCTGTAGCGGGTCATGATGGACACCCCCGAGGCGCCTTCCGTCGCGAACTCCTCCGTGGCGCGCTTCGCCTCGAAGCTCGGCGCCGCCGTGCCCATGGACCGGACTATCGCCTCGCGCTGGTCCGCGCTCGACTCGGTTGGCGGAGCAGACGAGGCCACGACGGCTGCGGAGCAGGGGAGGATCATGGCGCACGGCACCCCGCGCTCCTGAGATGCCAGAGCGACCCAGTGATGCATGAGATCGGCGAGAACCCAATCCGGCCTCTTGCCGCCGGCGCACGCGGTGTCGAGGAACGCGGAGAACGGCGCGGCGAGCCCGTCGAACGCCTTCCTGTGAAGCTCGAACTTGTCGAACGGGACGTCGCTGGTGGCCTCGGCGCCGTCGGGGAGCCCGTCGACGCGCGGCAGTGGGAGCGCCACGAGGTCGACGAGCTCTGCCAGCTCGGGGCGAACCGGCGGGAGGCGGGCGAGGTTGCGCGGGGTGGAGACGAAGGACACGCGGTGGCCGCGCGCGGCGAGGCGCTCGGCGAGGTCAAGGCAGGGGAGCAGGTGGCCGAAGGCGAGCCACGGGAAGATGACGACGTGCAGCGGCGACTGCGAGGAATGGGCGTCGTCCATTTTCGGCCGGCGCGCACCGGTCAGCACTCAGGCGTCAGCGTGTGTGTGA                                                                                                                                                                                                                                                                             ]
[+] EMBL AK108055             [                                                                                                                                                     AATGCTGGACAAATTCATCGATGCACCTCTCTTCGCGCTCCCTGTCCGCCACGATCTCCTGCAGCTTCCGGGCATTGGCGAAGAACGTCTTCCCCTCTTCCTCCACCACGACGGCGCGGACGGCTCCGGCGACGCCGCCTCGGTCGAACGACCCGTCCTCGTCGTTCCTCGGCACCGCCACTCCGAGCTTCCTCCCCTCGAGAATCCGCGCGTTCGGGCCTTGGTCGCCTAAGATCGGCAGCATGATCAGCGGGTGCCCGAACTGGAGCCCCTCGACGACGGAGCCCCACCCGCAGTGCGTCAGGAACGCGCACACGGCGGCGTGCGCCAGTATGCTCACCTGAGGAGCCCACCGCGTCGTGACCAGCCCGCGCTCGCCGGTGCGGCCCAGGAACCCCGCTGGTAGGACGCTGTCCGCGTCGACGCCGGCGGGCTTCCTCATGGCCCAGAGGAAGCGCGTCCCGGCGAGGTCCAGCCCGTGAGCCAGCTCGCGCAGCAGGTCCGCGCTCATCGGCGCCTCGCTTCCCAGCGCGACGTAGACGACCGACTTGGCCGGCTGAGCGTCGAGCCACTGCATGATTGCGTCGTGCTTGCCGTTCTTGCTGACGCCGCGGGCGCCGTCCGGCCGTGGCGGGAGCAGGCCGAACGGGACGACCGGCTTGCCGTAGAACCTCGTCAGGATCGTGAACGCGCCGGGCTCCAGCTCGGGGCAGCTCCGCATTGCGACGAGCTTGGACCTCTGCAGCGTCAGGCTGTAGCGGGTCATGATGGACACCCCCGAGGCGCCTTCCGTCGCGAACTCCTCCGTGGCGCGCTTCGCCTCGAAGCTCGGCGCCGCCGTGCCCATGGACCGGACTATCGCCTCGCGCTGGTCCGCGCTCGACTCGGTTGGCGGAGCAGACGAGGCCACGACGGCTGCGGAGCAGGGGAGGATCATGGCGCACGGCACCCCGCGCTCCTGAGATGCCAGAGCGACCCAGTGATGCATGAGATCGGCGAGAACCCAATCCGGCCTCTTGCCGCCGGCGCACGCGGTGTCGAGGAACGCGGAGAACGGCGCGGCGAGCCCGTCGAACGCCTTCCTGTGAAGCTCGAACTTGTCGAACGGGACGTCGCTGGTGGCCTCGGCGCCGTCGGGGAGCCCGTCGACGCGCGGCAGTGGGAGCGCCACGAGGTCGACGAGCTCTGCCAGCTCGGGGCGAACCGGCGGGAGGCGGGCGAGGTTGCGCGGGGTGGAGACGAAGGACACGCGGTGGCCGCGCGCGGCGAGGCGCTCGGCGAGGTCAAGGCAGGGGAGCAGGTGGCCGAAGGCGAGCCACGGGAAGATGACGACGTGCAGCGGCGACTGCGAGGAATGGGCGTCGTCCATTTTCGGCCGGCGCGCACCGGTCAGCACTCAGGCGTCAGCGTGTGTGTGAGAAGTTTGGCTCTGATGATCCAGTCATGAGTGTATAGGGAGTACTCCGTATGCAAATCGTGCTAGTTAAAGGGGAGAAAACGAGGAAAGATTCCCGAACGCGATGCGTATTGTCGAGCCCAGCCGAGTGCGAGGCAGCCGGGACTACTCATCTCCTCCCTCCATCTACTACCTCCCTCAAAAAAAAAAAAAAACTTTTATCCAGATTCATTATTTTAGGAGGAAACCCCTCCTTAGAGCAGGTATAATAGAGTATGATAAGCCAGCGAT]


>consensus_5946#0 GGAGTATTTTTCGATCTGAACCAAACAAGCACATAACCAAAACCTCAAAACATGTGTAGC CAAGTTGGCTAGCTTTCACCGAGTACAGTATATACCCTACTACGGATATTGGCCGTCTGA ATTGTTCTTCAGCTCATTCCAAGACGTCAAATGCTGGACAAATTCATCGATGCACCTCTC TTCGCGCTCCCTGTCCGCCACGATCTCCTGCAGCTTCCGGGCATTGGCGAAGAACGTCTT CCCCTCTTCCTCCACCACGACGGCGCGGACGGCTCCGGCGACGCCGCCTCGGTCGAACGA CCCGTCCTCGTCGTTCCTCGGCACCGCCACTCCGAGCTTCCTCCCCTCGAGAATCCGCGC GTTCGGGCCTTGGTCGCCTAAGATCGGCAGCATGATCAGCGGGTGCCCGAACTGGAGCCC CTCGACGACGGAGCCCCACCCGCAGTGCGTCAGGAACGCGCACACGGCGGCGTGCGCCAG TATGCTCACCTGAGGAGCCCACCGCGTCGTGACCAGCCCGCGCTCGCCGGTGCGGCCCAG GAACCCCGCTGGTAGGACGCTGTCCGCGTCGACGCCGGCGGGCTTCCTCATGGCCCAGAG GAAGCGCGTCCCGGCGAGGTCCAGCCCGTGAGCCAGCTCGCGCAGCAGGTCCGCGCTCAT CGGCGCCTCGCTTCCCAGCGCGACGTAGACGACCGACTTGGCCGGCTGAGCGTCGAGCCA CTGCATGATTGCGTCGTGCTTGCCGTTCTTGCTGACGCCGCGGGCGCCGTCCGGCCGTGG CGGGAGCAGGCCGAACGGGACGACCGGCTTGCCGTAGAACCTCGTCAGGATCGTGAACGC GCCGGGCTCCAGCTCGGGGCAGCTCCGCATTGCGACGAGCTTGGACCTCTGCAGCGTCAG GCTGTAGCGGGTCATGATGGACACCCCCGAGGCGCCTTCCGTCGCGAACTCCTCCGTGGC GCGCTTCGCCTCGAAGCTCGGCGCCGCCGTGCCCATGGACCGGACTATCGCCTCGCGCTG GTCCGCGCTCGACTCGGTTGGCGGAGCAGACGAGGCCACGACGGCTGCGGAGCAGGGGAG GATCATGGCGCACGGCACCCCGCGCTCCTGAGATGCCAGAGCGACCCAGTGATGCATGAG ATCGGCGAGAACCCAATCCGGCCTCTTGCCGCCGGCGCACGCGGTGTCGAGGAACGCGGA GAACGGCGCGGCGAGCCCGTCGAACGCCTTCCTGTGAAGCTCGAACTTGTCGAACGGGAC GTCGCTGGTGGCCTCGGCGCCGTCGGGGAGCCCGTCGACGCGCGGCAGTGGGAGCGCCAC GAGGTCGACGAGCTCTGCCAGCTCGGGGCGAACCGGCGGGAGGCGGGCGAGGTTGCGCGG GGTGGAGACGAAGGACACGCGGTGGCCGCGCGCGGCGAGGCGCTCGGCGAGGTCAAGGCA GGGGAGCAGGTGGCCGAAGGCGAGCCACGGGAAGATGACGACGTGCAGCGGCGACTGCGA GGAATGGGCGTCGTCCATTTTCGGCCGGCGCGCACCGGTCAGCACTCAGGCGTCAGCGTG TGTGTGAGAAGTTTGGCTCTGATGATCCAGTCATGAGTGTATAGGGAGTACTCCGTATGC AAATCGTGCTAGTTAAAGGGGAGAAAACGAGGAAAGATTCCCGAACGCGATGCGTATTGT CGAGCCCAGCCGAGTGCGAGGCAGCCGGGACTACTCATCTCCTCCCTCCATCTACTACCT CCCTCAAAAAAAAAAAAAAACTTTTATCCAGATTCATTATTTTAGGAGGAAACCCCTCCT TAGAGCAGGTATAATAGAGTATGATAAGCCAGCGAT



consensusID : consensus_5946#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 429
fasta sequence
                              [TCCGGCACGCCGAAATGCGCGCACGCCGTCGCCGTGTACGGCATCATGAGGACGCAGGGAACCTTGCGGTCGGCGGCGGAGGCGGCGGCCCAGGAAAGCATGCCGTCGAGGATGAGCCAGTCGACCTTGTTCCCCGCGGCGGCGGCGGCGTCGAGGAAGGCGGAGAAGGGCGCGGTGAGCCCATCGGAGGCCTTCCAGAGAGCGGATGACATGTGATCGGGGACGTCGGTGGTGGCCTCGGCGCCGTCGGGGAGGCCGTCGACGCGCGGGAGCGGCAGCTCGACGAACTCGACGGACGGGCACGGGCGGCGGAGGCGAGCGATGTTGCGCGGGGTGGAGACGAAGGACACGCGGAGGCCGCGCGAGGCCAGGCGGCCGGCGAGCTCGAGGGCAGGGAGGAGGTGGCCGAACGCGAGCCACGGGAAGACG]

[-] EMBL AU182347             [TCCGGCACGCCGAAATGCGCGCACGCCGTCGCCGTGTACGGCATCATGAGGACGCAGGGAACCTTGCGGTCGGCGGCGGAGGCGGCGGCCCAGGAAAGCATGCCGTCGAGGATGAGCCAGTCGACCTTGTTCCCCGCGGCGGCGGCGGCGTCGAGGAAGGCGGAGAAGGGCGCGGTGAGCCCATCGGAGGCCTTCCAGAGAGCGGATGACATGTGATCGGGGACGTCGGTGGTGGCCTCGGCGCCGTCGGGGAGGCCGTCGACGCGCGGGAGCGGCAGCTCGACGAACTCGACGGACGGGCACGGGCGGCGGAGGCGAGCGATGTTGCGCGGGGTGGAGACGAAGGACACGCGGAGGCCGCGCGAGGCCAGGCGGCCGGCGAGCTCGAGGGCAGGGAGGAGGTGGCCGAACGCGAGCCACGGGAAGACG]


>consensus_5946#1 TCCGGCACGCCGAAATGCGCGCACGCCGTCGCCGTGTACGGCATCATGAGGACGCAGGGA ACCTTGCGGTCGGCGGCGGAGGCGGCGGCCCAGGAAAGCATGCCGTCGAGGATGAGCCAG TCGACCTTGTTCCCCGCGGCGGCGGCGGCGTCGAGGAAGGCGGAGAAGGGCGCGGTGAGC CCATCGGAGGCCTTCCAGAGAGCGGATGACATGTGATCGGGGACGTCGGTGGTGGCCTCG GCGCCGTCGGGGAGGCCGTCGACGCGCGGGAGCGGCAGCTCGACGAACTCGACGGACGGG CACGGGCGGCGGAGGCGAGCGATGTTGCGCGGGGTGGAGACGAAGGACACGCGGAGGCCG CGCGAGGCCAGGCGGCCGGCGAGCTCGAGGGCAGGGAGGAGGTGGCCGAACGCGAGCCAC GGGAAGACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5946#0      GGAGTATTTTTCGATCTGAACCAAACAAGCACATAACCAAAACCTCAAAACATGTGTAGC 60
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CAAGTTGGCTAGCTTTCACCGAGTACAGTATATACCCTACTACGGATATTGGCCGTCTGA 120
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      ATTGTTCTTCAGCTCATTCCAAGACGTCAAATGCTGGACAAATTCATCGATGCACCTCTC 180
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      TTCGCGCTCCCTGTCCGCCACGATCTCCTGCAGCTTCCGGGCATTGGCGAAGAACGTCTT 240
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CCCCTCTTCCTCCACCACGACGGCGCGGACGGCTCCGGCGACGCCGCCTCGGTCGAACGA 300
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CCCGTCCTCGTCGTTCCTCGGCACCGCCACTCCGAGCTTCCTCCCCTCGAGAATCCGCGC 360
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      GTTCGGGCCTTGGTCGCCTAAGATCGGCAGCATGATCAGCGGGTGCCCGAACTGGAGCCC 420
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CTCGACGACGGAGCCCCACCCGCAGTGCGTCAGGAACGCGCACACGGCGGCGTGCGCCAG 480
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      TATGCTCACCTGAGGAGCCCACCGCGTCGTGACCAGCCCGCGCTCGCCGGTGCGGCCCAG 540
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      GAACCCCGCTGGTAGGACGCTGTCCGCGTCGACGCCGGCGGGCTTCCTCATGGCCCAGAG 600
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      GAAGCGCGTCCCGGCGAGGTCCAGCCCGTGAGCCAGCTCGCGCAGCAGGTCCGCGCTCAT 660
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CGGCGCCTCGCTTCCCAGCGCGACGTAGACGACCGACTTGGCCGGCTGAGCGTCGAGCCA 720
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CTGCATGATTGCGTCGTGCTTGCCGTTCTTGCTGACGCCGCGGGCGCCGTCCGGCCGTGG 780
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CGGGAGCAGGCCGAACGGGACGACCGGCTTGCCGTAGAACCTCGTCAGGATCGTGAACGC 840
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      GCCGGGCTCCAGCTCGGGGCAGCTCCGCATTGCGACGAGCTTGGACCTCTGCAGCGTCAG 900
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      GCTGTAGCGGGTCATGATGGACACCCCCGAGGCGCCTTCCGTCGCGAACTCCTCCGTGGC 960
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      GCGCTTCGCCTCGAAGCTCGGCGCCGCCGTGCCCATGGACCGGACTATCGCCTCGCGCTG 1020
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      GTCCGCGCTCGACTCGGTTGGCGGAGCAGACGAGGCCACGACGGCTGCGGAGCAGGGGAG 1080
consensus_5946#1      ------------TCCGGCACGCCGAA---ATGCGCGCACGCCGTC-GCCGTGTACGGCAT 44
                                    ***   ** **    * * *  **** ** * ** * * * ** * 

consensus_5946#0      GATCATGGCGCACGGCACCCCGCGCTCCTGAGATGCCAGAGCGACCCAGTGATGCATGAG 1140
consensus_5946#1      CATGAGGACGCAGGGAACCTTGCGGTCGGCGGCGGAGGCGGCGGCCCAGGAAAGCATGCC 104
                       ** * * **** ** ***  *** **    *  *     *** *****  * *****  

consensus_5946#0      ATCGGCGAGAACCCAATCCGGCCTCTTGCCGCCGGCGCACGCGGTGTCGAGGAACGCGGA 1200
consensus_5946#1      GTCGAGGATGAGCCAGTCGACCTTGTTCCCCGCGGCGGCGGCGGCGTCGAGGAAGGCGGA 164
                       ***  **  * *** **   * * ** **  *****   **** ********* *****

consensus_5946#0      GAACGGCGCGGCGAGCCCGTCGAACGCCTTCCTGTGAAGCTCGAACTTGTCGAACGGGAC 1260
consensus_5946#1      GAAGGGCGCGGTGAGCCCATCGGAGGCCTTCCAGAGAGCGGATGACATGTGATCGGGGAC 224
                      *** ******* ****** *** * ******* * **       ** ***     *****

consensus_5946#0      GTCGCTGGTGGCCTCGGCGCCGTCGGGGAGCCCGTCGACGCGCGGCAGTGGGAGCGCCAC 1320
consensus_5946#1      GTCGGTGGTGGCCTCGGCGCCGTCGGGGAGGCCGTCGACGCGCGGGAGCGGCAGCTCGAC 284
                      **** ************************* ************** ** ** *** * **

consensus_5946#0      GAGGTCGACGAGCTCTGCCAGCTCGGGGCGAACCGGCGGGAGGCGGGCGAGGTTGCGCGG 1380
consensus_5946#1      GAACTCGACGGACG-----GGCACGGG------CGGCGG-AGGCGAGCGATGTTGCGCGG 332
                      **  ******  *       ** ****      ****** ***** **** *********

consensus_5946#0      GGTGGAGACGAAGGACACGCGGTGGCCGCGCGCGGCGAGGCGCTCGGCGAGGTCAAGGCA 1440
consensus_5946#1      GGTGGAGACGAAGGACACGCGGAGGCCGCGCGAGGCCAGGCGGCCGGCGAGCTCGAGGGC 392
                      ********************** ********* *** *****  ******* ** ***  

consensus_5946#0      GGGGAGCAGGTGGCCGAAGGCGAGCCACGGGAAGATGACGACGTGCAGCGGCGACTGCGA 1500
consensus_5946#1      AGGGAGGAGGTGGCCGAACGCGAGCCACGGGAAGACG----------------------- 429
                       ***** *********** **************** *                       

consensus_5946#0      GGAATGGGCGTCGTCCATTTTCGGCCGGCGCGCACCGGTCAGCACTCAGGCGTCAGCGTG 1560
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      TGTGTGAGAAGTTTGGCTCTGATGATCCAGTCATGAGTGTATAGGGAGTACTCCGTATGC 1620
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      AAATCGTGCTAGTTAAAGGGGAGAAAACGAGGAAAGATTCCCGAACGCGATGCGTATTGT 1680
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CGAGCCCAGCCGAGTGCGAGGCAGCCGGGACTACTCATCTCCTCCCTCCATCTACTACCT 1740
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      CCCTCAAAAAAAAAAAAAAACTTTTATCCAGATTCATTATTTTAGGAGGAAACCCCTCCT 1800
consensus_5946#1      ------------------------------------------------------------
                                                                                  

consensus_5946#0      TAGAGCAGGTATAATAGAGTATGATAAGCCAGCGAT 1836
consensus_5946#1      ------------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)