cluster # 5950

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Oryza sativa
cluster # 5950 cluster # 5950 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5950#0 length = 364 sequences # 3

consensusID : consensus_5950#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 364
fasta sequence

                              [TATACCTCAGGCATCATGCTGTTGATAATGTCATCAAGATTCATAATTTNNCCGCTCCTGTGGA-ATAAGTTGCTGAATCGTTTTTTCAACCGTTGATTTCTTCGCCGTTTTCGCCATCGGTAAAGCGTAAAGAGGCAGAGTTAACACAATAACGTTCGCCCGTTGGCTGCGGNCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGACAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCGGAATCATACTTGGTTTGGGAATGAAACAGCGGGGCATCGCAGATCAAACA]

[+] EMBL OSS4563A             [TATACCTCAGGCATCATGCTGTTGATAATGTCATCAAGATTCATAATTTTNCCGCTCCTGTGGA ATAAGTTGCTGAATCGTTTTTTCAACCGTTGATTTCTTCGCCGTTTTCGCCATCGGTAAAGCGTAAAGAGGCAGAGTTAACACAATAACGTTCGNCCGTTGGCTGCGGGCCGTCGGGGAAGACATGCCCCANATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGACAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCGGAATCATACTTGGTTTGGGAATGAAACAGCGGGGCATCGCAGATCAAACA]
[+] EMBL OSC4251              [           CATCATGCTGTTGATAATGTCATCAAGATTCATAATTTNNCCGCTCCTGTGGA ATAAGTTGCTGAATCGTTTTTTCAACCGTTGATTTCTTCGCCGTTTTCGCCATCGGTAAAGCGTAAAGAGGCAGAGTTAACACAATAACGTTCGCCCGTTGGCTGCGGNCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGACAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGNCAGCCACAGCCGGAATCATACTT                                       ]
[+] EMBL OSC316               [           CATCATGCNNTTGATAATGTCATCAAGNTTCATAATTTNTCCGCTCCTNTGGACATAAGTTGCTGANTCGTTTTTTCAACCGTTGATTTCTTCGCCGTTTTCGCCATCGGTAAAGCGTAAAGAGGCAGAGTTAACACAATAACGTTCGCCCGTTGGCTGCGGNCCGTCGGNGAAGACATGCCCCAGATGGGCATCACAGTTACCGCANCGAATTTCTATGCGCTGCATTNCATGTGACAAGTCTTat                                                                                                           ]




>consensus_5950#0
TATACCTCAGGCATCATGCTGTTGATAATGTCATCAAGATTCATAATTTNNCCGCTCCTG
TGGAATAAGTTGCTGAATCGTTTTTTCAACCGTTGATTTCTTCGCCGTTTTCGCCATCGG
TAAAGCGTAAAGAGGCAGAGTTAACACAATAACGTTCGCCCGTTGGCTGCGGNCCGTCGG
GGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTC
CATGTGACAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGG
GCCAGCCACAGCCGGAATCATACTTGGTTTGGGAATGAAACAGCGGGGCATCGCAGATCA
AACA

clustalw multiple alignements is not computed in this case