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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5952 cluster # 5952       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5952#0 length = 979 sequences # 3  

consensusID : consensus_5952#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 979
fasta sequence
                              [GCCTTGGACTTTATTGCATGTGCAGCTGCCGATGCCTTTGCCATGACTGACCCAGGTAGCCAGTTCTCTTCCCTTGTCCAAGGATATCGCATGTACTATGGTGGTGGGGACCTTCCTACAATTAGACCAAACAAGCGCCGGCTAGCCAGCATACTTCTGAAGAATGCCACAATGGAGTGGAATGAATTTGAAACTAGAGTAAGAAAACTCATACAGCAAACTAAGCAAGTCCATGAGAGACCAGTTGCAAGGAGTATATTCAGACATCCTCGATGTCTTGATTGTATGTGCAGAACAGAGAACTGAGATATTTAGGAACTGTCTTGTGCCTATAGCAATTTTAGAAGACAATGTTTGGTGCTTTGGCAGACAGATGGGTTTGTTCCTCTTTTCCCTGAAGTACCATTTGGAATCAAATTGTAAAGGGGGTGATTGGCTCTCACTGCTAGCAGAAACAATTGCACTTTCTGATGATGGCTCTAGCACAGTTTAATATGATCAACTAGCATTTCCTGGCTTCCTGATCAGACAAATTTGTTTTGGATTTCAATACCATGGCACTTTCTTATCTCCTATGTGATGGTACCAAGGACTGAAGTGTGCATCCAAGCTGCAGTGCTGCCAGATTTTTTGATACAGCTAAATTGAACAATGCGGTTACTGGGAGTACATCATCAGCATCTGTCACAAAAAGAAACAATTTCATTTTGCCGAGCAACGTTAGCAGCACCATTCTAGTTTTGAAGGCTGTCTTGTTTGTATCATTTGACAATTCAGGATGCAGGTTTTTGGCAAATTGAGTATGTGATCTTCAATATGGTTTCTTTCAGTCATTTGATGAGTCAAGTGGCAACTAGTTCTCTTCTATTCTTTAGTTGATTGAGTAGTCTTGTATTATACGAGCCGTACATAACATTGTTGTAACTTGTAAGTTTATACAAATTGAGGAAGTTAAAATGAACAGCAAGAGGAACACTTA]

[+] EMBL AK062674             [GCCTTGGACTTTATTGCATGTGCAGCTGCCGATGCCTTTGCCATGACTGACCCAGGTAGCCAGTTCTCTTCCCTTGTCCAAGGATATCGCATGTACTATGGTGGTGGGGACCTTCCTACAATTAGACCAAACAAGCGCCGGCTAGCCAGCATACTTCTGAAGAATGCCACAATGGAGTGGAATGAATTTGAAACTAGAGTAAGAAAACTCATACAGCAAACTAAGCAAGTCCATGAGAGACCAGTTGCAAGGAGTATATTCAGACATCCTCGATGTCTTGATTGTATGTGCAGAACAGAGAACTGAGATATTTAGGAACTGTCTTGTGCCTATAGCAATTTTAGAAGACAATGTTTGGTGCTTTGGCAGACAGATGGGTTTGTTCCTCTTTTCCCTGAAGTACCATTTGGAATCAAATTGTAAAGGGGGTGATTGGCTCTCACTGCTAGCAGAAACAATTGCACTCTCTGATGATGGCTCTAGCACAGTTTAATATGATCAACTAGCATTTCCTGGCTTCCTGATCAGACAAATTTGTTTTGGATTTCAATACCATGGCACTTTCTTATCTCCTATGTGATGGTACCAAGGACTGAAGTGTGCATCCAAGCTGCAGTGCTGCCAGATTTTTTGATACAGCTAAATTGAACAATGCGGTTACTGGGAGTACATCATCAGCATCTGTCACAAAAAGAAACAATTTCATTTTGCCGAGCAACGTTAGCAGCACCATTCTAGTTTTGAAGGCTGTCTTGTTTGTATCATTTGACAATTCAGGATGCAGGTTTTTGGCAAATTGAGTATGTGATCTTCAATATGGTTTCTTTCAGTCATTTGATGAGTCAAGTGGCAACTAGTTCTCTTCTATTCTTTAGTTGATTGAGTAGTCTTGTATTATACGAGCCGTACATAACATTGTTGTAACTTGTAAGTTTATACAAATTGAGGAAGTTAAAATGAACAGCAAGAGGAACACTTA]
[-] EMBL CB632897             [                                                                                                                                                         CTTCTGAAGAATGCCACAATGGAGTGGAATGAATTTGAAACTAGAGTAAGAAAACTCATACAGCAAACTAAGCAAGTCCATGAGAGACCAGTTGCAAGGAGTATATTCAGACATCCTCGATGTCTTGATTGTATGTGCAGAACAGAGAACTGAGATATTTAGGAACTGTCTTGTGCCTATAGCAATTTTAGAAGACAATGTTTGGTGCTTTGGCAGACAGATGGGTTTGTTCCTCTTTTCCCTGAAGTACCATTTGGAATCAAATTGTAAAGGGGGTGATTGGCTCTCACTGCTAGCAGAAACAATTGCACTTTCTGATGATGGCTCTAGCACAGTTTAATATGATCAACTAGCATTTCCTGGCTTCCTGATCAGACAAATTTGTTTTGGATTTCAATACCATGGCACTTTCTTATCTCCTATGTGATGGTACCAAGGACTGAAGTGTGCATCCAAGCTGCAGTGCTGCCAGATTTTTTGATACAGCTAAATTGAACAATGCGGTTACTGGGAGTACATCATCAGCATCTGTCACAAAAAGAAACAATTTCATTTTGCCGAGCAACGTTAGCAGCACCATTCTAGTTTTGAAGGCTGTCTTGTTTGTATCATTTGACAATTCAGGATGCAGGTTTTTGGCAAATTGAGTATGTGATCTTCAATATGGTTTCTTTCAGTCATTTGATGAGTCAAGTGGCAACTAGTTCTCTTCTATTCTTTAGTTGATTGAGTAGTCTTGTATTATACGAGCCGTACATAACATTGTTGTAACTTGTAAGTTTATACAAATTGAGGAAGTTAAA                       ]
[-] EMBL CB632896             [                                                                                                                                                                                                                                                  AGTTGCAAGGAGTATATTCAGACATCCTCGATGTCTTGATTGTATGTGCAGAACAGAGAACTGAGATATTTAGGAACTGTCTTGTGCCTATAGCAATTTTAGAAGACAATGTTTGGTGCTTTGGCAGACAGATGGGTTTGTTCCTCTTTTCCCTGAAGTACCATTTGGAATCAAATTGTAAAGGGGGTGATTGGCTCTCACTGCTAGCAGAAACAATTGCACTTTCTGATGATGGCTCTAGCACAGTTTAATATGATCAACTAGCATTTCCTGGCTTCCTGATCAGACAAATTTGTTTTGGATTTCAATACCATGGCACTTTCTTATCTCCTATGTGATGGTACCAAGGACTGAAGTGTGCATCCAAGCTGCAGTGCTGCCAGATTTTTTGATACAGCTAAATTGAACAATGCGGTTACTGGGAGTACATCATCAGCATCTGTCCCAAAAAGAAACAATTTCATTTTCCCGAGCAACGTTAGCAGCACCATT                                                                                                                                                                                                                                                     ]


>consensus_5952#0 GCCTTGGACTTTATTGCATGTGCAGCTGCCGATGCCTTTGCCATGACTGACCCAGGTAGC CAGTTCTCTTCCCTTGTCCAAGGATATCGCATGTACTATGGTGGTGGGGACCTTCCTACA ATTAGACCAAACAAGCGCCGGCTAGCCAGCATACTTCTGAAGAATGCCACAATGGAGTGG AATGAATTTGAAACTAGAGTAAGAAAACTCATACAGCAAACTAAGCAAGTCCATGAGAGA CCAGTTGCAAGGAGTATATTCAGACATCCTCGATGTCTTGATTGTATGTGCAGAACAGAG AACTGAGATATTTAGGAACTGTCTTGTGCCTATAGCAATTTTAGAAGACAATGTTTGGTG CTTTGGCAGACAGATGGGTTTGTTCCTCTTTTCCCTGAAGTACCATTTGGAATCAAATTG TAAAGGGGGTGATTGGCTCTCACTGCTAGCAGAAACAATTGCACTTTCTGATGATGGCTC TAGCACAGTTTAATATGATCAACTAGCATTTCCTGGCTTCCTGATCAGACAAATTTGTTT TGGATTTCAATACCATGGCACTTTCTTATCTCCTATGTGATGGTACCAAGGACTGAAGTG TGCATCCAAGCTGCAGTGCTGCCAGATTTTTTGATACAGCTAAATTGAACAATGCGGTTA CTGGGAGTACATCATCAGCATCTGTCACAAAAAGAAACAATTTCATTTTGCCGAGCAACG TTAGCAGCACCATTCTAGTTTTGAAGGCTGTCTTGTTTGTATCATTTGACAATTCAGGAT GCAGGTTTTTGGCAAATTGAGTATGTGATCTTCAATATGGTTTCTTTCAGTCATTTGATG AGTCAAGTGGCAACTAGTTCTCTTCTATTCTTTAGTTGATTGAGTAGTCTTGTATTATAC GAGCCGTACATAACATTGTTGTAACTTGTAAGTTTATACAAATTGAGGAAGTTAAAATGA ACAGCAAGAGGAACACTTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)