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Oryza sativa
cluster # 5954 cluster # 5954       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5954#0 length = 2229 sequences # 1  
consensus_5954#1 length = 1104 sequences # 2  

consensusID : consensus_5954#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2229
fasta sequence
                              [GTATTCAACCAGCTCATGTGGTCGCTGGGTGTCCCGGAGGACGTGGCGGAGTTCCACGACGTGTACAGCCTCGACGCCGATGCGCTGGAGATGGTGCCCCAGCCTGTGCTCGCCGTCGTCTTCTGCTTCCCCGATCCAACCCAGGTGCATTCATCACTTTGCTCCAGAGTTTGTTTTCTGTTTCGCGAGTTTTGAGAAAAATCAGGGGCTCGATCTCCGCTCACCCATACAAATGCATAATGTTTCCTGATTTGCCTTCTACAACCGTGTAACTCCAATATAAGTGGATGATCAATGATCATCTTGCGATGTGTCTTAACTGAAACTATGTATACTGCTGTGAGGGTCAAGTTGGAGCTTATATCTGTTCCTTCGCATAGCCGGTTAGGTCGCGTGTCTCAATTTTTTTGACTTGGCTTCCGTGTGCTCGACTAAATTCGATGCTACACCCACGTCAGTACTCTTAAATATCATTTTCAGGAGTTGTTCTTCTCAAAAAGGACCATTGAACACTATATCTCTTTGTCATCATTGAAATCTCTCCAGATTAATGTACAAGTTCCAGACTTCAGTGCTTCATATGCTGTATAGACATGAGATCACTGAGGTGCTTCAGTGATTGTTTTAATGTTGTTACTATACCCCCATTGCTTCACAAGAGTGCCCAAAAACTAGTTTTGTGGCATGTTTGACCTGTTGAGGAGAGATAAAATGGCCATGACCTTTGTTATGTATGTTTGACATCTCTAATAAGCTATAATTGGGGCAGAAGGTTCACTATTTAATATCTCCATTTATATATTCTGTCAGATATTCCCTGGTTGTTAGGTGCATAATCTTATATAAAAGGGTAATAGAACCTCTGGCTCTATGCATTTATAGTTCAACTACTCTGTGATATACGCATCTCAACCAATAATTAAATGTGTTTTTTTATGATGATATATGGACATGTTGATTGTTTCTGTGAAATGTGTGTAAAGAATCTCTCTCTTTTTAATGTACATTTACTAGCTTAGTACTATTATGGGTTTCAGCCTTTACTTGATTTACACACTTAGCCCTACTTCGGTGCAGGATGCAAGTAATCCTTCACAGCATCTTTTAATTACTGGAGAGAAGGTGAGCAAATGTGTTTTTGGCATGATAGTGCCACCTGAAAGGGCTATAGCTTCACGTAAAGAGTGCTACATTTTGTTTCTTAATTATAACAGGGTCCTTAATCCTGATAGTTTTACACCAATCATCATGGTTGCCTTTAATCATACATGTTTCTTTCATGCCTTCTGCAACAGGAAACTTTGTTTTTCATAAAACAAATTGAATCACTAGGAAATGCTTGTGGAACTATTGCGCTACTTCATGCTGTTGGAAATGCATATTCAGAAATCAGTTTGTCGGAGAATTCTTTCTTGGACATGTTTATCAAATCAACATCTGGCATGACTTCATACGAGCGTGCTGTGTTTCTTGAGAAGGATGATGACATGGCAAGAGCTCACTTATCGGCTGCCAGTGCCGGTGACACAAAGCTATCTGATGACGTTGAAGAGCATTATATATGTTTTGTCGAATGTGATGGAACACTCTATGAGCTTGATGGTATGAAGCCTGGACCAATAAATCATGGCCCATCATCCTCTAAAAGCTTACTGCAGGATGCTGTGAATATCATTAAGGCCACCATGCACAACATTCCCAACTCGGTGAACTTCAACGTAATAGTGCTATCAAGAAAAGCAGAGTAAAGCAAAACAGAGCTTTTTCAGATAACTGATTGAGGCCATAAAGGTGAAGGGCTATCTAGTTCAGCAAATTACACAGACTTCACACTCGTTCTGTCTTCTACTTGAACTACCTTGAGCTGCCACGGTCTACCAGGAAGAAAATTATCGTCGTGAGTCAGAGAATGTATACATCACAACTTTCCATGAATAATCGACTGATCCAACATGACTATTGCAGATTCACTCAGCATCTGGACCTCAAATTTAATAAAGTTTCAGTTACCTAGGAGATGGGCTTGCCCATGCCCATCCAGGAGGGATGCACCAGCTGATCAACCAGCTGCGACATATTTCACCTGTTGGCCCTGTAGCTGCTCCCTTTCTCCCTTGATCGGCTGATCGCAATGCAACAAGACACCTTTCTATGTCTATTCTCTGCTATTTCTCAAACCAGCATGGTGACTTGACATTTACACCGCCTAATATCGCTCACTCATTGCCA]

[+] EMBL AK103595             [GTATTCAACCAGCTCATGTGGTCGCTGGGTGTCCCGGAGGACGTGGCGGAGTTCCACGACGTGTACAGCCTCGACGCCGATGCGCTGGAGATGGTGCCCCAGCCTGTGCTCGCCGTCGTCTTCTGCTTCCCCGATCCAACCCAGGTGCATTCATCACTTTGCTCCAGAGTTTGTTTTCTGTTTCGCGAGTTTTGAGAAAAATCAGGGGCTCGATCTCCGCTCACCCATACAAATGCATAATGTTTCCTGATTTGCCTTCTACAACCGTGTAACTCCAATATAAGTGGATGATCAATGATCATCTTGCGATGTGTCTTAACTGAAACTATGTATACTGCTGTGAGGGTCAAGTTGGAGCTTATATCTGTTCCTTCGCATAGCCGGTTAGGTCGCGTGTCTCAATTTTTTTGACTTGGCTTCCGTGTGCTCGACTAAATTCGATGCTACACCCACGTCAGTACTCTTAAATATCATTTTCAGGAGTTGTTCTTCTCAAAAAGGACCATTGAACACTATATCTCTTTGTCATCATTGAAATCTCTCCAGATTAATGTACAAGTTCCAGACTTCAGTGCTTCATATGCTGTATAGACATGAGATCACTGAGGTGCTTCAGTGATTGTTTTAATGTTGTTACTATACCCCCATTGCTTCACAAGAGTGCCCAAAAACTAGTTTTGTGGCATGTTTGACCTGTTGAGGAGAGATAAAATGGCCATGACCTTTGTTATGTATGTTTGACATCTCTAATAAGCTATAATTGGGGCAGAAGGTTCACTATTTAATATCTCCATTTATATATTCTGTCAGATATTCCCTGGTTGTTAGGTGCATAATCTTATATAAAAGGGTAATAGAACCTCTGGCTCTATGCATTTATAGTTCAACTACTCTGTGATATACGCATCTCAACCAATAATTAAATGTGTTTTTTTATGATGATATATGGACATGTTGATTGTTTCTGTGAAATGTGTGTAAAGAATCTCTCTCTTTTTAATGTACATTTACTAGCTTAGTACTATTATGGGTTTCAGCCTTTACTTGATTTACACACTTAGCCCTACTTCGGTGCAGGATGCAAGTAATCCTTCACAGCATCTTTTAATTACTGGAGAGAAGGTGAGCAAATGTGTTTTTGGCATGATAGTGCCACCTGAAAGGGCTATAGCTTCACGTAAAGAGTGCTACATTTTGTTTCTTAATTATAACAGGGTCCTTAATCCTGATAGTTTTACACCAATCATCATGGTTGCCTTTAATCATACATGTTTCTTTCATGCCTTCTGCAACAGGAAACTTTGTTTTTCATAAAACAAATTGAATCACTAGGAAATGCTTGTGGAACTATTGCGCTACTTCATGCTGTTGGAAATGCATATTCAGAAATCAGTTTGTCGGAGAATTCTTTCTTGGACATGTTTATCAAATCAACATCTGGCATGACTTCATACGAGCGTGCTGTGTTTCTTGAGAAGGATGATGACATGGCAAGAGCTCACTTATCGGCTGCCAGTGCCGGTGACACAAAGCTATCTGATGACGTTGAAGAGCATTATATATGTTTTGTCGAATGTGATGGAACACTCTATGAGCTTGATGGTATGAAGCCTGGACCAATAAATCATGGCCCATCATCCTCTAAAAGCTTACTGCAGGATGCTGTGAATATCATTAAGGCCACCATGCACAACATTCCCAACTCGGTGAACTTCAACGTAATAGTGCTATCAAGAAAAGCAGAGTAAAGCAAAACAGAGCTTTTTCAGATAACTGATTGAGGCCATAAAGGTGAAGGGCTATCTAGTTCAGCAAATTACACAGACTTCACACTCGTTCTGTCTTCTACTTGAACTACCTTGAGCTGCCACGGTCTACCAGGAAGAAAATTATCGTCGTGAGTCAGAGAATGTATACATCACAACTTTCCATGAATAATCGACTGATCCAACATGACTATTGCAGATTCACTCAGCATCTGGACCTCAAATTTAATAAAGTTTCAGTTACCTAGGAGATGGGCTTGCCCATGCCCATCCAGGAGGGATGCACCAGCTGATCAACCAGCTGCGACATATTTCACCTGTTGGCCCTGTAGCTGCTCCCTTTCTCCCTTGATCGGCTGATCGCAATGCAACAAGACACCTTTCTATGTCTATTCTCTGCTATTTCTCAAACCAGCATGGTGACTTGACATTTACACCGCCTAATATCGCTCACTCATTGCCA]


>consensus_5954#0 GTATTCAACCAGCTCATGTGGTCGCTGGGTGTCCCGGAGGACGTGGCGGAGTTCCACGAC GTGTACAGCCTCGACGCCGATGCGCTGGAGATGGTGCCCCAGCCTGTGCTCGCCGTCGTC TTCTGCTTCCCCGATCCAACCCAGGTGCATTCATCACTTTGCTCCAGAGTTTGTTTTCTG TTTCGCGAGTTTTGAGAAAAATCAGGGGCTCGATCTCCGCTCACCCATACAAATGCATAA TGTTTCCTGATTTGCCTTCTACAACCGTGTAACTCCAATATAAGTGGATGATCAATGATC ATCTTGCGATGTGTCTTAACTGAAACTATGTATACTGCTGTGAGGGTCAAGTTGGAGCTT ATATCTGTTCCTTCGCATAGCCGGTTAGGTCGCGTGTCTCAATTTTTTTGACTTGGCTTC CGTGTGCTCGACTAAATTCGATGCTACACCCACGTCAGTACTCTTAAATATCATTTTCAG GAGTTGTTCTTCTCAAAAAGGACCATTGAACACTATATCTCTTTGTCATCATTGAAATCT CTCCAGATTAATGTACAAGTTCCAGACTTCAGTGCTTCATATGCTGTATAGACATGAGAT CACTGAGGTGCTTCAGTGATTGTTTTAATGTTGTTACTATACCCCCATTGCTTCACAAGA GTGCCCAAAAACTAGTTTTGTGGCATGTTTGACCTGTTGAGGAGAGATAAAATGGCCATG ACCTTTGTTATGTATGTTTGACATCTCTAATAAGCTATAATTGGGGCAGAAGGTTCACTA TTTAATATCTCCATTTATATATTCTGTCAGATATTCCCTGGTTGTTAGGTGCATAATCTT ATATAAAAGGGTAATAGAACCTCTGGCTCTATGCATTTATAGTTCAACTACTCTGTGATA TACGCATCTCAACCAATAATTAAATGTGTTTTTTTATGATGATATATGGACATGTTGATT GTTTCTGTGAAATGTGTGTAAAGAATCTCTCTCTTTTTAATGTACATTTACTAGCTTAGT ACTATTATGGGTTTCAGCCTTTACTTGATTTACACACTTAGCCCTACTTCGGTGCAGGAT GCAAGTAATCCTTCACAGCATCTTTTAATTACTGGAGAGAAGGTGAGCAAATGTGTTTTT GGCATGATAGTGCCACCTGAAAGGGCTATAGCTTCACGTAAAGAGTGCTACATTTTGTTT CTTAATTATAACAGGGTCCTTAATCCTGATAGTTTTACACCAATCATCATGGTTGCCTTT AATCATACATGTTTCTTTCATGCCTTCTGCAACAGGAAACTTTGTTTTTCATAAAACAAA TTGAATCACTAGGAAATGCTTGTGGAACTATTGCGCTACTTCATGCTGTTGGAAATGCAT ATTCAGAAATCAGTTTGTCGGAGAATTCTTTCTTGGACATGTTTATCAAATCAACATCTG GCATGACTTCATACGAGCGTGCTGTGTTTCTTGAGAAGGATGATGACATGGCAAGAGCTC ACTTATCGGCTGCCAGTGCCGGTGACACAAAGCTATCTGATGACGTTGAAGAGCATTATA TATGTTTTGTCGAATGTGATGGAACACTCTATGAGCTTGATGGTATGAAGCCTGGACCAA TAAATCATGGCCCATCATCCTCTAAAAGCTTACTGCAGGATGCTGTGAATATCATTAAGG CCACCATGCACAACATTCCCAACTCGGTGAACTTCAACGTAATAGTGCTATCAAGAAAAG CAGAGTAAAGCAAAACAGAGCTTTTTCAGATAACTGATTGAGGCCATAAAGGTGAAGGGC TATCTAGTTCAGCAAATTACACAGACTTCACACTCGTTCTGTCTTCTACTTGAACTACCT TGAGCTGCCACGGTCTACCAGGAAGAAAATTATCGTCGTGAGTCAGAGAATGTATACATC ACAACTTTCCATGAATAATCGACTGATCCAACATGACTATTGCAGATTCACTCAGCATCT GGACCTCAAATTTAATAAAGTTTCAGTTACCTAGGAGATGGGCTTGCCCATGCCCATCCA GGAGGGATGCACCAGCTGATCAACCAGCTGCGACATATTTCACCTGTTGGCCCTGTAGCT GCTCCCTTTCTCCCTTGATCGGCTGATCGCAATGCAACAAGACACCTTTCTATGTCTATT CTCTGCTATTTCTCAAACCAGCATGGTGACTTGACATTTACACCGCCTAATATCGCTCAC TCATTGCCA



consensusID : consensus_5954#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1104
fasta sequence
                              [GTATTCAACCAGCTCATGTGGTCGCTGGGTGTCCCGGAGGACGTGGCGGAGTTCCACGACGTGTACAGCCTCGACGCCGATGCGCTGGAGATGGTGCCCCAGCCTGTGCTCGCCGTCGTCTTCTGCTTCCCCGATCCAACCCAGGATGCAAGTAATCCTTCACAGCATCTTTTAATTACTGGAGAGAAGGTGAGCAAATGTGTTTTTGGCATGATAGTGCCACCTGAAAGGGCTATAGCTTCACGTAAAGAGTGCTACATTTTGTTTCTTAATTATAACAGGGTCCTTAATCCTGATAGTTTTACACCAATCATCATGGTTGCCTTTAATCATACATGTTTCTTTCATGCCTTCTGCAACAGGAAACTTTGTTTTTCATAAAACAAATTGAATCACTAGGAAATGCTTGTGGAACTATTGCGCTACTTCATGCTGTTGGAAATGCATATTCAGAAATCAGTTTGTCGGAGAATTCTTTCTTGGACATGTTTATCAAATCAACATCTGGCATGACTTCATACGAGCGTGCTGTGTTTCTTGAGAAGGATGATGACATGGCAAGAGCTCACTTATCGGCTGCCAGTGCCGGTGACACAAAGCTATCTGATGACGTTGAAGAGCATTATATATGTTTTGTCGAATGTGATGGAACACTCTATGAGCTTGATGGTATGAAGCCTGGNACC-ATAAATCATGGCCCATCATCCTCTAAAAGCTACTGCAGGATGCTGTGAATATCATTAAGGCCACCATGCACAACATTCCCAACTCGGTGAACTTCAACGTAATAGTGCTATCAAGAAAAGCAGAGTAAAGCAAAACAGAGCTTTTTCAGATAACTGATTGAGGCCATAAAGGTGAAGGGCTATCTAGTTCAGCAAATTACACAGACTTCACACTCGTTCTGTCTTCTACTTGAACTACCTTGAGCTGCCACGGTATGTTTTTACTCTCGAAGGGCATTCAGATTTGTCATTTTAGACATTTAAGTTATGCCTCAGTGGCCATCAGTTCTTGTTTGTTTTAGTGAGAGAAAACCTGAGCCTGTCATAATTTAATGCCAAATGAAAGTAAGGGCAAGTAGATTCCTAATGCAAAAAAAAA]

[+] EMBL CB674857             [GTATTCAACCAGCTCATGTGGTCGCTGGGTGTCCCGGAGGACGTGGCGGAGTTCCACGACGTGTACAGCCTCGACGCCGATGCGCTGGAGATGGTGCCCCAGCCTGTGCTCGCCGTCGTCTTCTGCTTCCCCGATCCAACCCAGGATGCAAGTAATCCTTCACAGCATCTTTTAATTACTGGAGAGAAGGTGAGCAAATGTGTTTTTGGCATGATAGTGCCACCTGAAAGGGCTATAGCTTCACGTAAAGAGTGCTACATTTTGTTTCTTAATTATAACAGGGTCCTTAATCCTGATAGTTTTACACCAATCATCATGGTTGCCTTTAATCATACATGTTTCTTTCATGCCTTCTGCAACAGGAAACTTTGTTTTTCATAAAACAAATTGAATCACTAGGAAATGCTTGTGGAACTATTGCGCTACTTCATGCTGTTGGAAATGCATATTCAGAAATCAGTTTGTCGGAGAATTCTTTCTTGGACATGTTTATCAAATCAACATCTGGCATGACTTCATACGAGCGTGCTGTGTTTCTTGAGAAGGATGATGACATGGCAAGAGCTCACTTATCGGCTGCCAGTGCCGGTGACACAAAGCTATCTGATGACGTTGAAGAGCATTATATATGTTTTGTCGAATGTGATGGAACACTCTATGAGCTTGATGGTATGAAGCCTGGNACC ATAAATCATGGC                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CA762319             [                                                                                                                                                                                                                                                                                                                                                                                                                               TATTGCGCTACTTCATGCTGTGGGAAATGCATACTCAGAACTCAGTTTGTCGGAGAATTCTTTCTTGGACATGTTTATCAAATCAGCGTCTGGCATGACTTCATACGAGCGTGCTGTGTTTCTTGAGAAGGATGATGACATGGCAAGAGCTCACTTATCGGCTGCCAGTGCCGGTGACACAAAGCTATCTGATGACGTTGAAGAGCATCATATATGTTTTGTCGAATGTGATGGAACACTCTATGAGCTTGATGGTATGAAGCCTGG ACCAATAAATCATGGCCCATCATCCTCTAAAAGCTACTGCAGGATGCTGTGAATATCATTAAGGCCACCATGCACAACATTCCCAACTCGGTGAACTTCAACGTAATAGTGCTATCAAGAAAAGCAGAGTAAAGCAAAACAGAGCTTTTTCAGATAACTGATTGAGGCCATAAAGGTGAAGGGCTATCTAGTTCAGCAAATTACACAGACTTCACACTCGTTCTGTCTTCTACTTGAACTACCTTGAGCTGCCACGGTATGTTTTTACTCTCGAAGGGCATTCAGATTTGTCATTTTAGACATTTAAGTTATGCCTCAGTGGCCATCAGTTCTTGTTTGTTTTAGTGAGAGAAAACCTGAGCCTGTCATAATTTAATGCCAAATGAAAGTAAGGGCAAGTAGATTCCTAATGCAAAAAAAAA]


>consensus_5954#1 GTATTCAACCAGCTCATGTGGTCGCTGGGTGTCCCGGAGGACGTGGCGGAGTTCCACGAC GTGTACAGCCTCGACGCCGATGCGCTGGAGATGGTGCCCCAGCCTGTGCTCGCCGTCGTC TTCTGCTTCCCCGATCCAACCCAGGATGCAAGTAATCCTTCACAGCATCTTTTAATTACT GGAGAGAAGGTGAGCAAATGTGTTTTTGGCATGATAGTGCCACCTGAAAGGGCTATAGCT TCACGTAAAGAGTGCTACATTTTGTTTCTTAATTATAACAGGGTCCTTAATCCTGATAGT TTTACACCAATCATCATGGTTGCCTTTAATCATACATGTTTCTTTCATGCCTTCTGCAAC AGGAAACTTTGTTTTTCATAAAACAAATTGAATCACTAGGAAATGCTTGTGGAACTATTG CGCTACTTCATGCTGTTGGAAATGCATATTCAGAAATCAGTTTGTCGGAGAATTCTTTCT TGGACATGTTTATCAAATCAACATCTGGCATGACTTCATACGAGCGTGCTGTGTTTCTTG AGAAGGATGATGACATGGCAAGAGCTCACTTATCGGCTGCCAGTGCCGGTGACACAAAGC TATCTGATGACGTTGAAGAGCATTATATATGTTTTGTCGAATGTGATGGAACACTCTATG AGCTTGATGGTATGAAGCCTGGNACCATAAATCATGGCCCATCATCCTCTAAAAGCTACT GCAGGATGCTGTGAATATCATTAAGGCCACCATGCACAACATTCCCAACTCGGTGAACTT CAACGTAATAGTGCTATCAAGAAAAGCAGAGTAAAGCAAAACAGAGCTTTTTCAGATAAC TGATTGAGGCCATAAAGGTGAAGGGCTATCTAGTTCAGCAAATTACACAGACTTCACACT CGTTCTGTCTTCTACTTGAACTACCTTGAGCTGCCACGGTATGTTTTTACTCTCGAAGGG CATTCAGATTTGTCATTTTAGACATTTAAGTTATGCCTCAGTGGCCATCAGTTCTTGTTT GTTTTAGTGAGAGAAAACCTGAGCCTGTCATAATTTAATGCCAAATGAAAGTAAGGGCAA GTAGATTCCTAATGCAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5954#0      GTATTCAACCAGCTCATGTGGTCGCTGGGTGTCCCGGAGGACGTGGCGGAGTTCCACGAC 60
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      GTGTACAGCCTCGACGCCGATGCGCTGGAGATGGTGCCCCAGCCTGTGCTCGCCGTCGTC 120
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      TTCTGCTTCCCCGATCCAACCCAGGTGCATTCATCACTTTGCTCCAGAGTTTGTTTTCTG 180
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      TTTCGCGAGTTTTGAGAAAAATCAGGGGCTCGATCTCCGCTCACCCATACAAATGCATAA 240
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      TGTTTCCTGATTTGCCTTCTACAACCGTGTAACTCCAATATAAGTGGATGATCAATGATC 300
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      ATCTTGCGATGTGTCTTAACTGAAACTATGTATACTGCTGTGAGGGTCAAGTTGGAGCTT 360
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      ATATCTGTTCCTTCGCATAGCCGGTTAGGTCGCGTGTCTCAATTTTTTTGACTTGGCTTC 420
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      CGTGTGCTCGACTAAATTCGATGCTACACCCACGTCAGTACTCTTAAATATCATTTTCAG 480
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      GAGTTGTTCTTCTCAAAAAGGACCATTGAACACTATATCTCTTTGTCATCATTGAAATCT 540
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      CTCCAGATTAATGTACAAGTTCCAGACTTCAGTGCTTCATATGCTGTATAGACATGAGAT 600
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      CACTGAGGTGCTTCAGTGATTGTTTTAATGTTGTTACTATACCCCCATTGCTTCACAAGA 660
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      GTGCCCAAAAACTAGTTTTGTGGCATGTTTGACCTGTTGAGGAGAGATAAAATGGCCATG 720
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      ACCTTTGTTATGTATGTTTGACATCTCTAATAAGCTATAATTGGGGCAGAAGGTTCACTA 780
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      TTTAATATCTCCATTTATATATTCTGTCAGATATTCCCTGGTTGTTAGGTGCATAATCTT 840
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      ATATAAAAGGGTAATAGAACCTCTGGCTCTATGCATTTATAGTTCAACTACTCTGTGATA 900
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      TACGCATCTCAACCAATAATTAAATGTGTTTTTTTATGATGATATATGGACATGTTGATT 960
consensus_5954#1      ----------------------------GTATTCAACCAGCTCATGTGGTC--GCTGGGT 30
                                                   * **  *  *    ** *** *  * **  *

consensus_5954#0      GTTTCTGTGAAATGTGTGTAAAGAATCTCTCTCTTTTTAATGTACATTTACTAGCTTAGT 1020
consensus_5954#1      GTCCC---GGAGGACGTG-GCGGAGTTCCACGACGTGTACAGCCTCGACGCCGATGCGCT 86
                      **  *   * *    ***    ** *  * *    * **  *        *        *

consensus_5954#0      ACTATTATGGGTTTCAGCCTTTACTTGATTTACACACTTAG--CCCTACTTCGGTGCAGG 1078
consensus_5954#1      GGAGATG-GTGCCCCAGCCTGTGCTCGCCGTCGTCTTCTGCTTCCCCGATCCAACCCAGG 145
                           *  * *   ****** * ** *   *   *   *    ***   * *    ****

consensus_5954#0      ATGCAAGTAATCCTTCACAGCATCTTTTAATTACTGGAGAGAAGGTGAGCAAATGTGTTT 1138
consensus_5954#1      ATGCAAGTAATCCTTCACAGCATCTTTTAATTACTGGAGAGAAGGTGAGCAAATGTGTTT 205
                      ************************************************************

consensus_5954#0      TTGGCATGATAGTGCCACCTGAAAGGGCTATAGCTTCACGTAAAGAGTGCTACATTTTGT 1198
consensus_5954#1      TTGGCATGATAGTGCCACCTGAAAGGGCTATAGCTTCACGTAAAGAGTGCTACATTTTGT 265
                      ************************************************************

consensus_5954#0      TTCTTAATTATAACAGGGTCCTTAATCCTGATAGTTTTACACCAATCATCATGGTTGCCT 1258
consensus_5954#1      TTCTTAATTATAACAGGGTCCTTAATCCTGATAGTTTTACACCAATCATCATGGTTGCCT 325
                      ************************************************************

consensus_5954#0      TTAATCATACATGTTTCTTTCATGCCTTCTGCAACAGGAAACTTTGTTTTTCATAAAACA 1318
consensus_5954#1      TTAATCATACATGTTTCTTTCATGCCTTCTGCAACAGGAAACTTTGTTTTTCATAAAACA 385
                      ************************************************************

consensus_5954#0      AATTGAATCACTAGGAAATGCTTGTGGAACTATTGCGCTACTTCATGCTGTTGGAAATGC 1378
consensus_5954#1      AATTGAATCACTAGGAAATGCTTGTGGAACTATTGCGCTACTTCATGCTGTTGGAAATGC 445
                      ************************************************************

consensus_5954#0      ATATTCAGAAATCAGTTTGTCGGAGAATTCTTTCTTGGACATGTTTATCAAATCAACATC 1438
consensus_5954#1      ATATTCAGAAATCAGTTTGTCGGAGAATTCTTTCTTGGACATGTTTATCAAATCAACATC 505
                      ************************************************************

consensus_5954#0      TGGCATGACTTCATACGAGCGTGCTGTGTTTCTTGAGAAGGATGATGACATGGCAAGAGC 1498
consensus_5954#1      TGGCATGACTTCATACGAGCGTGCTGTGTTTCTTGAGAAGGATGATGACATGGCAAGAGC 565
                      ************************************************************

consensus_5954#0      TCACTTATCGGCTGCCAGTGCCGGTGACACAAAGCTATCTGATGACGTTGAAGAGCATTA 1558
consensus_5954#1      TCACTTATCGGCTGCCAGTGCCGGTGACACAAAGCTATCTGATGACGTTGAAGAGCATTA 625
                      ************************************************************

consensus_5954#0      TATATGTTTTGTCGAATGTGATGGAACACTCTATGAGCTTGATGGTATGAAGCCTGGACC 1618
consensus_5954#1      TATATGTTTTGTCGAATGTGATGGAACACTCTATGAGCTTGATGGTATGAAGCCTGGNAC 685
                      *********************************************************  *

consensus_5954#0      AATAAATCATGGCCCATCATCCTCTAAAAGCTTACTGCAGGATGCTGTGAATATCATTAA 1678
consensus_5954#1      CATAAATCATGGCCCATCATCCTCTAAAAGCT-ACTGCAGGATGCTGTGAATATCATTAA 744
                       ******************************* ***************************

consensus_5954#0      GGCCACCATGCACAACATTCCCAACTCGGTGAACTTCAACGTAATAGTGCTATCAAGAAA 1738
consensus_5954#1      GGCCACCATGCACAACATTCCCAACTCGGTGAACTTCAACGTAATAGTGCTATCAAGAAA 804
                      ************************************************************

consensus_5954#0      AGCAGAGTAAAGCAAAACAGAGCTTTTTCAGATAACTGATTGAGGCCATAAAGGTGAAGG 1798
consensus_5954#1      AGCAGAGTAAAGCAAAACAGAGCTTTTTCAGATAACTGATTGAGGCCATAAAGGTGAAGG 864
                      ************************************************************

consensus_5954#0      GCTATCTAGTTCAGCAAATTACACAGACTTCACACTCGTTCTGTCTTCTACTTGAACTAC 1858
consensus_5954#1      GCTATCTAGTTCAGCAAATTACACAGACTTCACACTCGTTCTGTCTTCTACTTGAACTAC 924
                      ************************************************************

consensus_5954#0      CTTGAGCTGCCACGGTCTACCAGGAAGAAAATTATCGTCGTGAGTCAGAGAATGTATACA 1918
consensus_5954#1      CTTGAGCTGCCACGGTATGTTTTTACTCTCGAAGGGCATTCAGATTTGTCATTTTAGACA 984
                      **************** *      *                   *  *  * * ** ***

consensus_5954#0      TCACAACTTTCCATGAATAATCGACTGATCCAACATGACTATTGCAGATTCACTCAGCAT 1978
consensus_5954#1      TTTAAGTTATGCCTCAGTGGCCATCAGTTCT----TGTTTGTTTTAG--TGAGAGAAAAC 1038
                      *   *  * * * * * *   *  * * **     **  * **  **  * *   *  * 

consensus_5954#0      CTGGACCTCAAATTTAATAAAGTTTCAGTTACCTAGGAGATGGGCTTGCCCATGCCCA-T 2037
consensus_5954#1      CTGAGCCT--GTCATAATTTAATGCCAAATG---AAAGTAAGGGCAAGTAGATTCCTAAT 1093
                      ***  ***      ****  * *  **  *    *    * ****  *   ** ** * *

consensus_5954#0      CCAGGAGGGATGCACCAGCTGATCAACCAGCTGCGACATATTTCACCTGTTGGCCCTGTA 2097
consensus_5954#1      GCAAAAAAAAA------------------------------------------------- 1104
                       **  *   *                                                  

consensus_5954#0      GCTGCTCCCTTTCTCCCTTGATCGGCTGATCGCAATGCAACAAGACACCTTTCTATGTCT 2157
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      ATTCTCTGCTATTTCTCAAACCAGCATGGTGACTTGACATTTACACCGCCTAATATCGCT 2217
consensus_5954#1      ------------------------------------------------------------
                                                                                  

consensus_5954#0      CACTCATTGCCA 2229
consensus_5954#1      ------------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)