cluster # 5956

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Oryza sativa
cluster # 5956 cluster # 5956 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5956#0 length = 1608 sequences # 3
consensusID : consensus_5956#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1608
fasta sequence
                              [TCACATTTCCAACGCCGCGCCGCCCTCTTTCCTCTCCGACGACACCACGCCGTGTTCGCGAGTTCAGGAAGCTTCCACCGCCATGGCGGCGACCAGTGCTCCTCCAGTGGAGGTGCTCATCAACGACGCTTACCGCCAGATCCTGCTCCGCCTCCCGCCGACCGCCCCAAGCTGCTGTATCGCTTCGCCGCCGTCTGCAGGACATGGCGCAGCCTCCTCACCGACCCGGCCTTCCTCCGCCGCTACCGCGAGTTCCACGGGCTACCGCACCTGATCGGCTACGTCCACGACGGCGCTGATGGACGCGATCTGGTCGTTGCAAGGTTCGTGACCACCGCCGACACCACCTTCCGCCCGCGCGTGCCCGAGAAGGGCGTCGACCTCCACGTCCTCGACAGCCGCCACGGCCGCGTGATCTTCAGGAGGATTGGCAAGGGATGGCTCGATGAGTCGTCACTTATCATTTGGGACCCCGTCGCCGACCACCACCAGGAGGTGCCCCTGCCGGAGGCGTTCGCGCAGGAGGAATTCAACCTCACCGCCACCGTCCTCTGCGACGCCCTGGGATGCGACCACCTCGACTGCCACGGCGGCCCGTTCCGCGTGGTGTTCGTCGGCGTCCGCGACGAGGAGGGTGCGTCTGCCACTTCCGCCTTCAACTACACCTCCTCCTCCGGCTCCTGGACCGCTTCGCCCGCCGCCGCGGCCGCCGTCGCCGACGAGGATGACTGGGGATTTCGCATGCCCGCACCTAGCATCTTGGTGGGGGGGACCACGCTCTACTTCAGGAGCCCTGGGAGGATACTCCGGTACTGGTTCGGCGACGAGATGGAGCATCTGTCATACGTCGACATCCCGCCGTTCATCACTCAGGAGACACGCGGAACGGTGCTCATGCCGGCGGCGGACGGGAGGCTGAGCTTCGCGGCTATGTACGGCGACATGACGATCAGCTTCTGGGAAACCGAGGTCAGCGCTGACGGTGCTGTTGATTGGGTCCACACCCAGAACGCGCTCGTGAGCATCCCCCTACCTGGAGTCCTCATCGGCGCCGCCGCGAGCTTGCTTTTCGTCCGCACCGAGGACGGTGGGATCGTCAGCGTCCAAGTGGGGAACGGACGATTCCAGATGCTACCCCAGCCAGCCCCCCAGCGGCAGCAGATATCTGCTCTCATCCCCTTCATGAGCTTCTGTACCCCATGAGGTTTACATATCTCTGTCGCTAATACTACAAAGGTGGAGGCTGAAGTACAAGGAGGAGACATGGCTGATTTGGATGATTTTCAGAAGAAATCTTTACTGCGGACGACAGATTATGTGCCTGATGACTTGGGATAGTCGTGGTTTAGACTTTAGATGAGTAGTTTTCGTCTTGCTTTTGTTTCTCAGTAGAAAAAAAGGGGGTGCTTAGTTCCTTTGTGTTGTTCTGAACCCTGTCATGGAAGGCTGGTTGTTCCCAGCGCCTCTCTATTTTGGTTCTGCATTCTGCTTTCTTTTTGTTATTAAGTCGTTGTGAACTCTGAATGTTGTCTAGGCTGTCTCAATAAGGAGAGAATTCCTTATATGCCATTGAAATTTGGTCTCAAAAAAAAAAAAAAAAAAAAAAGG]

[+] EMBL AK106884             [TCACATTTCCAACGCCGCGCCGCCCTCTTTCCTCTCCGACGACACCACGCCGTGTTCGCGAGTTCAGGAAGCTTCCACCGCCATGGCGGCGACCAGTGCTCCTCCAGTGGAGGTGCTCATCAACGACGCTTACCGCCAGATCCTGCTCCGCCTCCCGCCGACCGCCCCAAGCTGCTGTATCGCTTCGCCGCCGTCTGCAGGACATGGCGCAGCCTCCTCACCGACCCGGCCTTCCTCCGCCGCTACCGCGAGTTCCACGGGCTACCGCACCTGATCGGCTACGTCCACGACGGCGCTGATGGACGCGATCTGGTCGTTGCAAGGTTCGTGACCACCGCCGACACCACCTTCCGCCCGCGCGTGCCCGAGAAGGGCGTCGACCTCCACGTCCTCGACAGCCGCCACGGCCGCGTGATCTTCAGGAGGATTGGCAAGGGATGGCTCGATGAGTCGTCACTTATCATTTGGGACCCCGTCGCCGACCACCACCAGGAGGTGCCCCTGCCGGAGGCGTTCGCGCAGGAGGAATTCAACCTCACCGCCACCGTCCTCTGCGACGCCCTGGGATGCGACCACCTCGACTGCCACGGCGGCCCGTTCCGCGTGGTGTTCGTCGGCGTCCGCGACGAGGAGGGTGCGTCTGCCACTTCCGCCTTCAACTACACCTCCTCCTCCGGCTCCTGGACCGCTTCGCCCGCCGCCGCGGCCGCCGTCGCCGACGAGGATGACTGGGGATTTCGCATGCCCGCACCTAGCATCTTGGTGGGGGGGACCACGCTCTACTTCAGGAGCCCTGGGAGGATACTCCGGTACTGGTTCGGCGACGAGATGGAGCATCTGTCATACGTCGACATCCCGCCGTTCATCACTCAGGAGACACGCGGAACGGTGCTCATGCCGGCGGCGGACGGGAGGCTGAGCTTCGCGGCTATGTACGGCGACATGACGATCAGCTTCTGGGAAACCGAGGTCAGCGCTGACGGTGCTGTTGATTGGGTCCACACCCAGAACGCGCTCGTGAGCATCCCCCTACCTGGAGTCCTCATCGGCGCCGCCGCGAGCTTGCTTTTCGTCCGCACCGAGGACGGTGGGATCGTCAGCGTCCAAGTGGGGAACGGACGATTCCAGATGCTACCCCAGCCAGCCCCCCAGCGGCAGCAGATATCTGCTCTCATCCCCTTCATGAGCTTCTGTACCCCATGAGGTTTACATATCTCTGTCGCTAATACTACAAAGGTGGAGGCTGAAGTACAAGGAGGAGACATGGCTGATTTGGATGATTTTCAGAAGAAATCTTTACTGCGGACGACAGATTATGTGCCTGATGACTTGGGATAGTCGTGGTTTAGACTTTAGATGAGTAGTTTTCGTCTTGCTTTTGTTTCTCAGTAGAAAAAAAGGGGGTGCTTAGTTCCTTTGTGTTGTTCTGAACCCTGTCATGGAAGGCTGGTTGTTCCCAGCGCCTCTCTATTTTGGTTCTGCATTCTGCTTTCTTTTTGTTATTAAGTCGTTGTGAACTCTGAATGTTGTCTAGGCTGTCTCAATAAGGAGAGAATTC                                                  ]
[+] EMBL CB662092             [                  GCCGCCCTCTTTCCTCTCCGACGACACCACGCCGTGTTCGCGAGTTCAGGAAGCTTCCACCGCCATGGCGGCGACCAGTGCTCCTCCAGTGGAGGTGCTCATCAACGACGCTTACCGCCAGATCCTGCTCCGCCTCCCGCCGACCGCCCCAAGCTGCTGTATCGCTTCGCCGCCGTCTGCAGGACATGGCGCAGCCTCCTCACCGACCCGGCCTTCCTCCGCCGCTACCGCGAGTTCCACGGGCTACCGCACCTGATCGGCTACGTCCACGACGGCGCTGATGGACGCGATCTGGTCGTTGCAAGGTTCGTGACCACCGCCGACACCACCTTCCGCCCGCGCGTGCCCGAGAAGGGCGTCGACCTCCACGTCCTCGACAGCCGCCACGGCCGCGTGATCTTCAGGAGGATTGGCAAGGGATGGCTCGATGAGTCGTCACTTATCATTTGGGACCCCGTCGCCGACCACCACCAGGAGGTGCCCCTGCCGGAGGCGTTCGCGCAGGAGGAATTCAACCTCACCGCCACCGTCCTCTGCGACGCCCTGGGATGCGACCACCTCGACTGCCACGGCGGCCCGTTCCGCGTGGTGTTCGTCGGCGTCCGCGACGAGGAGGGTGCGTCTGCCACTTCCGCCTTCAACTACACCTCCTCCTCCGGCTCCTGGACCGCTTCGCCCGCCGCCGCGGCCGCCGTCGCCGACGAGGATGACTGGGGATTTCGCATGCCCGCACCTAGCATCTTGGTGGGGGGGACCACGCTCTACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB662093             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGAGGCTGAGCTTCGCGGCTATGTACGGCGACATGACGATCAGCTTTTGGGAACCCGAGGTCAGCGCTGACGGTGCTGTTGATTGGGTCCACCCCCAGAACGCGCTCGTGAGCATCCCCCTCCCTGGAGTCCTCATCGGCGCCGCCGCGAGCTTGCTTTTCGTCCGCCCCGAGGACGGTGGGATCGTCAGCGTCCAAGTGGGGAACGGACGATTCCAGATGCTACCCCAGCCAGCCCCCCAGCGGCAGCAGATATTTGCTCTCATCCCCTTCATGAGCTTTTGTCCCCCATGAGGTTTACATATCTCTGTCGCTAATACTACAAAGGTGGAGGCTGAAGTCCAAGGAGGAGCCATGGCTGATTTGGATGATTTTCAGAAGAAATCTTTACTGCGGACGCCAGATTATGTCCCTGATGACTTGGGATAGTCGTGGTTTAGACTTTAGAGGAGTAGTTTTCGTCTTGCTTTTGTTTCTCAGTAGAAAAAAAGGGGGTGCTTAGTTCCTTTGTGTTGTTCGGACCCCTGTCATGGAAGGCTGGTTGTTCCCACCCCCTCTTTATTTGGGTTCGGCATTCTGCTTTCTTTTTGTTATTAAGTCGTTGTGAACTCTGAATGTTGTCTAGGCTGTCTCAATAAGGAGAGAATTCCTTATATGCCATTGAAATTTGGTCTCAAAAAAAAAAAAAAAAAAAAAAGG]




>consensus_5956#0
TCACATTTCCAACGCCGCGCCGCCCTCTTTCCTCTCCGACGACACCACGCCGTGTTCGCG
AGTTCAGGAAGCTTCCACCGCCATGGCGGCGACCAGTGCTCCTCCAGTGGAGGTGCTCAT
CAACGACGCTTACCGCCAGATCCTGCTCCGCCTCCCGCCGACCGCCCCAAGCTGCTGTAT
CGCTTCGCCGCCGTCTGCAGGACATGGCGCAGCCTCCTCACCGACCCGGCCTTCCTCCGC
CGCTACCGCGAGTTCCACGGGCTACCGCACCTGATCGGCTACGTCCACGACGGCGCTGAT
GGACGCGATCTGGTCGTTGCAAGGTTCGTGACCACCGCCGACACCACCTTCCGCCCGCGC
GTGCCCGAGAAGGGCGTCGACCTCCACGTCCTCGACAGCCGCCACGGCCGCGTGATCTTC
AGGAGGATTGGCAAGGGATGGCTCGATGAGTCGTCACTTATCATTTGGGACCCCGTCGCC
GACCACCACCAGGAGGTGCCCCTGCCGGAGGCGTTCGCGCAGGAGGAATTCAACCTCACC
GCCACCGTCCTCTGCGACGCCCTGGGATGCGACCACCTCGACTGCCACGGCGGCCCGTTC
CGCGTGGTGTTCGTCGGCGTCCGCGACGAGGAGGGTGCGTCTGCCACTTCCGCCTTCAAC
TACACCTCCTCCTCCGGCTCCTGGACCGCTTCGCCCGCCGCCGCGGCCGCCGTCGCCGAC
GAGGATGACTGGGGATTTCGCATGCCCGCACCTAGCATCTTGGTGGGGGGGACCACGCTC
TACTTCAGGAGCCCTGGGAGGATACTCCGGTACTGGTTCGGCGACGAGATGGAGCATCTG
TCATACGTCGACATCCCGCCGTTCATCACTCAGGAGACACGCGGAACGGTGCTCATGCCG
GCGGCGGACGGGAGGCTGAGCTTCGCGGCTATGTACGGCGACATGACGATCAGCTTCTGG
GAAACCGAGGTCAGCGCTGACGGTGCTGTTGATTGGGTCCACACCCAGAACGCGCTCGTG
AGCATCCCCCTACCTGGAGTCCTCATCGGCGCCGCCGCGAGCTTGCTTTTCGTCCGCACC
GAGGACGGTGGGATCGTCAGCGTCCAAGTGGGGAACGGACGATTCCAGATGCTACCCCAG
CCAGCCCCCCAGCGGCAGCAGATATCTGCTCTCATCCCCTTCATGAGCTTCTGTACCCCA
TGAGGTTTACATATCTCTGTCGCTAATACTACAAAGGTGGAGGCTGAAGTACAAGGAGGA
GACATGGCTGATTTGGATGATTTTCAGAAGAAATCTTTACTGCGGACGACAGATTATGTG
CCTGATGACTTGGGATAGTCGTGGTTTAGACTTTAGATGAGTAGTTTTCGTCTTGCTTTT
GTTTCTCAGTAGAAAAAAAGGGGGTGCTTAGTTCCTTTGTGTTGTTCTGAACCCTGTCAT
GGAAGGCTGGTTGTTCCCAGCGCCTCTCTATTTTGGTTCTGCATTCTGCTTTCTTTTTGT
TATTAAGTCGTTGTGAACTCTGAATGTTGTCTAGGCTGTCTCAATAAGGAGAGAATTCCT
TATATGCCATTGAAATTTGGTCTCAAAAAAAAAAAAAAAAAAAAAAGG
clustalw multiple alignements is not computed in this case