These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5982#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1648 fasta sequence [CCAACCAGAGGAAAAACCCATGGGAGAGACATTGTCAGGAAGGACACGAAGCCTTGACAATCGGTCCAAGCCCACGGCCCATTTCCCCACGACAGCCGCCCGCCGCCGCCGCCAACCCCAAAAGGGCGCGAGCGGCGAGGCGTTTCGTCGAGCACATGGAGGGCGGCGGCGGAGGCGGTACGGACATGAACGCCGTGCCGGATGGCGTCGTGCAGCACGTCCTGTCGATGCTCAGCAACGTCCGCGACGTGGCGGCGTGCGCCTGCGTGTGCCGCCGCTGGCGCGAGTGCGTGCCGTACCTGCCGGCGCTCTTCTTCCCGAGGAACGCCTTCGACACGGCCGCGGCGGCGGGGGGCGCCGCGGACGACGCCATCGGGCGGATGGTGAGGTCCGTCGAGCGGCTCCGGGAGCTGGTCATCTACTGCCCCTTCTCCATGGCCCGCCTGCCCGAGTGGCTGGCCCTGCGGAGCACCTCGCTCAGGGTGCTCGAGCTGCGGATGGACGCCGCCGCCGCCGATAAGGCGGAGGACGGCGGGTACCTGGACTGCATTGGCCTGGCCAGGGGCCTGGAGGAGCTCAGGCTCTGGGGGGTCTCGCTCACGGCCGCGCCGGCGTGGGGCCGGCTGGACAAGCTCCGCGTGCTGGAGATCGTCGGCGCCCCGCTAGAGGACAGCGCCGTGAAGGACGCCATCTCCGCGTGCCCCAACCTCACCGACCTGTCGCTGCTTGGATGCGACTGCTCGGGCGCGGTGTCCATCGAACTCGCGCTGCTCGAGCGATGCCGGCTTGACTTCCTCGGAGCCGGCAACTGCTCCCTCTCGCTCGCCGCTCCCCGCGTCGAGTCACTCGAGGTCCAGGGCTTCACCTGGATTACTCTGCGCGGTGGTCACAGCCTCCGCCGCCTCTCAATCGCCAAAAGCACAGGG-AGGGTGTACAAGGTGGACACCGGGAAGCTCCCAGATCTGGAGCACCTCTCTCTACGCGGTGTCCAGTGGAGCTGGGCTGCAGTAAGCTCTGTGCTGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATTGAGTTCAGTGGCGACTTTGACGCGCTCCAGCCATTCCCGGAA-GTCGA-TTTGGTCGACTTCTTCAACAGCCACCCGAATCTCCGCAAGTTTGATATTCATGGTGCCATGTTTGCTGCTCTGTGCCAGAAAAACAGCTTGAAGAATTTAGATGCAAGGTTCTGCATCCCTTGCTTGGAAGAGGTTTTGATCACAGTGCGCTCACCACTAAATGCTGAGCAGAAGCTGAACACCCTCGAGTCGCTTGTGAAGTATAGCGTGAGGCTGCGCTCTATGGTCATCAGAATCTCGCAGATGAAGAATTGCCATGATGCCGCTGATGATTTCTTTGAGGAGATATGTAAGTTCAAATACATGAACAACAAGAAAGTCCGGGTTGAATAAAACAAGATGCCGTGTGATTCTTTCATCAAATTGATTTGGTTAAGAACTAGTTTTTTTC-TTTCAATTTACCGTCACTTCAATAGAGGATGTGTGTCAATCCTTCTCGAGTAACTTATATTATGTTGTTTACCTGATTGAGTTCAAATGCTGGAGCTTGTTGGTAGAACAATTTTGATTGNTGTGCTTGGAATTTTGAAAACTGTGCT] [+] EMBL AK063505 [CCAACCAGAGGAAAAACCCATGGGAGAGACATTGTCAGGAAGGACACGAAGCCTTGACAATCGGTCCAAGCCCACGGCCCATTTCCCCACGACAGCCGCCCGCCGCCGCCGCCAACCCCAAAAGGGCGCGAGCGGCGAGGCGTTTCGTCGAGCACATGGAGGGCGGCGGCGGAGGCGGTACGGACATGAACGCCGTGCCGGATGGCGTCGTGCAGCACGTCCTGTCGATGCTCAGCAACGTCCGCGACGTGGCGGCGTGCGCCTGCGTGTGCCGCCGCTGGCGCGAGTGCGTGCCGTACCTGCCGGCGCTCTTCTTCCCGAGGAACGCCTTCGACACGGCCGCGGCGGCGGGGGGCGCCGCGGACGACGCCATCGGGCGGATGGTGAGGTCCGTCGAGCGGCTCCGGGAGCTGGTCATCTACTGCCCCTTCTCCATGGCCCGCCTGCCCGAGTGGCTGGCCCTGCGGAGCACCTCGCTCAGGGTGCTCGAGCTGCGGATGGACGCCGCCGCCGCCGATAAGGCGGAGGACGGCGGGTACCTGGACTGCATTGGCCTGGCCAGGGGCCTGGAGGAGCTCAGGCTCTGGGGGGTCTCGCTCACGGCCGCGCCGGCGTGGGGCCGGCTGGACAAGCTCCGCGTGCTGGAGATCGTCGGCGCCCCGCTAGAGGACAGCGCCGTGAAGGACGCCATCTCCGCGTGCCCCAACCTCACCGACCTGTCGCTGCTTGGATGCGACTGCTCGGGCGCGGTGTCCATCGAACTCGCGCTGCTCGAGCGATGCCGGCTTGACTTCCTCGGAGCCGGCAACTGCTCCCTCTCGCTCGCCGCTCCCCGCGTCGAGTCACTCGAGGTCCAGGGCTTCACCTGGATTACTCTGCGCGGTGGTCACAGCCTCCGCCGCCTCTCAATCGCCAAAAGCACAGGG AGGGTGTACAAGGTGGACACCGGGAAGCTCCCAGATCTGGAGCACCTCTCTCTACGCGGTGTCCAGTGGAGCTGGGCTGCAGTAAGCTCTGTGCTGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATTGAGTTCAGTGGCGACTTTGACGCGCTCCAGCCATTCCCGGAA GTCGA TTTGGTCGACTTCTTCAACAGCCACCCGAATCTCCGCAAGTTTGATATTCATGGTGCCATGTTTGCTGCTCTGTGCCAGAAAAACAGCTTGAAGAATTTAGATGCAAGGTTCTGCATCCCTTGCTTGGAAGAGGTTTTGATCACAGTGCGCTCACCACTAAATGCTGAGCAGAAGCTGAACACCCTCGAGTCGCTTGTGAAGTATAGCGTGAGGCTGCGCTCTATGGTCATCAGAATCTCGCAGATGAAGAATTGCCATGATGCCGCTGATGATTTCTTTGAGGAGATATGTAAGTTCAAATACATGAACAACAAGAAAGTCCGGGTTGAATAAAACAAGATGCCGTGTGATTCTTTCATCAAATTGATTTGGTTAAGAACTAGTTTTTTTC TTTCAATTTACCGTCACTTCAATAGAGGATGTGTGTCAATCCTTCTCGAGTAACTTATATTATGTTGTTTACCTGATTGAGTTCAAATGCTGGA ] [+] EMBL AA752492 [ cgagCGAACTCGCGCTGCTCGAGCGATGCCGGCTTGACTTCCTCGGAGCCGGCAACTGCTCCCTCTCGCTCGCCGCTCCCCGCGTCGAGTCACTCGAGGTCCAGGGCTTCACCTGGATTACTCTGCGCGGTGGTCACAGCCTCCGCCSSCTCTCAATCGCCAAAAGCACAGGGRRGGGKGTACAAGGKGGACACGGGGAAGCTCCCAGATCTGGAGCACCTCTCTCTACGC GTGTCCAGTDGAGCTGGGCTGCAGTAAGCYCTGTGCTGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATWKAGTTCAGTSGCGAYTTTGACG TCTYCAGCCATTCCCGGAAGGTCGATTTTGGTCGAYTTYTTCAACAGC ] [+] EMBL CA765275 [ GGCTGCAGTAAGCTCTGTGCTGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATTGAGTTCAGTGGCGACTTTGACGCGCTCCAGCCATTCCCGGAA GTCGA TTTGGTCGACTTCTTCAACAGCCACCCGAATCTCCGCAAGTTTGATATTCATGGTGCCATGTTTGCTGCTCTGTGCCAGAAAAACAGCTTGAAGAATTTAGATGCAAGGTTCTGCATCCCTTGCTTGGAAGAGGTTTTGATCACAGTGCGCTCACCACTAAATGCTGAGCAGAAGCTGAACACCCTCGAGTCGCTTGTGAAGTATAGCGTGAGGCTGCGCTCTATGGTCATCAGAATCTCGCAGATGAAGAATTGCCATGATGCCGCTGATGATTTCTTTGAGGAGATATGTAAGTTCAAATACATGAACAACAAGAAAGTCCGGGTTGAATAAAACAAGATGCCGTGTGATTCTTTCATCAAATTGATTTGGTTAAGAACTAGTTTTTTTCATTTCAATTTACCGTCACTTCAATAGAGGATGTGTGTCAATCCTTCTCGAGTAACTTATATTATGTTGTTTACCTGATTGAGTTCAAATGCTGGAGCTTGTTGGTAGAACAATTTTGATTGNTGTGCTTGGAATTTTGAAAACTGTGCT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||