cluster # 5982

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Oryza sativa
cluster # 5982 cluster # 5982 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5982#0 length = 1648 sequences # 3
consensusID : consensus_5982#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1648
fasta sequence
                              [CCAACCAGAGGAAAAACCCATGGGAGAGACATTGTCAGGAAGGACACGAAGCCTTGACAATCGGTCCAAGCCCACGGCCCATTTCCCCACGACAGCCGCCCGCCGCCGCCGCCAACCCCAAAAGGGCGCGAGCGGCGAGGCGTTTCGTCGAGCACATGGAGGGCGGCGGCGGAGGCGGTACGGACATGAACGCCGTGCCGGATGGCGTCGTGCAGCACGTCCTGTCGATGCTCAGCAACGTCCGCGACGTGGCGGCGTGCGCCTGCGTGTGCCGCCGCTGGCGCGAGTGCGTGCCGTACCTGCCGGCGCTCTTCTTCCCGAGGAACGCCTTCGACACGGCCGCGGCGGCGGGGGGCGCCGCGGACGACGCCATCGGGCGGATGGTGAGGTCCGTCGAGCGGCTCCGGGAGCTGGTCATCTACTGCCCCTTCTCCATGGCCCGCCTGCCCGAGTGGCTGGCCCTGCGGAGCACCTCGCTCAGGGTGCTCGAGCTGCGGATGGACGCCGCCGCCGCCGATAAGGCGGAGGACGGCGGGTACCTGGACTGCATTGGCCTGGCCAGGGGCCTGGAGGAGCTCAGGCTCTGGGGGGTCTCGCTCACGGCCGCGCCGGCGTGGGGCCGGCTGGACAAGCTCCGCGTGCTGGAGATCGTCGGCGCCCCGCTAGAGGACAGCGCCGTGAAGGACGCCATCTCCGCGTGCCCCAACCTCACCGACCTGTCGCTGCTTGGATGCGACTGCTCGGGCGCGGTGTCCATCGAACTCGCGCTGCTCGAGCGATGCCGGCTTGACTTCCTCGGAGCCGGCAACTGCTCCCTCTCGCTCGCCGCTCCCCGCGTCGAGTCACTCGAGGTCCAGGGCTTCACCTGGATTACTCTGCGCGGTGGTCACAGCCTCCGCCGCCTCTCAATCGCCAAAAGCACAGGG-AGGGTGTACAAGGTGGACACCGGGAAGCTCCCAGATCTGGAGCACCTCTCTCTACGCGGTGTCCAGTGGAGCTGGGCTGCAGTAAGCTCTGTGCTGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATTGAGTTCAGTGGCGACTTTGACGCGCTCCAGCCATTCCCGGAA-GTCGA-TTTGGTCGACTTCTTCAACAGCCACCCGAATCTCCGCAAGTTTGATATTCATGGTGCCATGTTTGCTGCTCTGTGCCAGAAAAACAGCTTGAAGAATTTAGATGCAAGGTTCTGCATCCCTTGCTTGGAAGAGGTTTTGATCACAGTGCGCTCACCACTAAATGCTGAGCAGAAGCTGAACACCCTCGAGTCGCTTGTGAAGTATAGCGTGAGGCTGCGCTCTATGGTCATCAGAATCTCGCAGATGAAGAATTGCCATGATGCCGCTGATGATTTCTTTGAGGAGATATGTAAGTTCAAATACATGAACAACAAGAAAGTCCGGGTTGAATAAAACAAGATGCCGTGTGATTCTTTCATCAAATTGATTTGGTTAAGAACTAGTTTTTTTC-TTTCAATTTACCGTCACTTCAATAGAGGATGTGTGTCAATCCTTCTCGAGTAACTTATATTATGTTGTTTACCTGATTGAGTTCAAATGCTGGAGCTTGTTGGTAGAACAATTTTGATTGNTGTGCTTGGAATTTTGAAAACTGTGCT]

[+] EMBL AK063505             [CCAACCAGAGGAAAAACCCATGGGAGAGACATTGTCAGGAAGGACACGAAGCCTTGACAATCGGTCCAAGCCCACGGCCCATTTCCCCACGACAGCCGCCCGCCGCCGCCGCCAACCCCAAAAGGGCGCGAGCGGCGAGGCGTTTCGTCGAGCACATGGAGGGCGGCGGCGGAGGCGGTACGGACATGAACGCCGTGCCGGATGGCGTCGTGCAGCACGTCCTGTCGATGCTCAGCAACGTCCGCGACGTGGCGGCGTGCGCCTGCGTGTGCCGCCGCTGGCGCGAGTGCGTGCCGTACCTGCCGGCGCTCTTCTTCCCGAGGAACGCCTTCGACACGGCCGCGGCGGCGGGGGGCGCCGCGGACGACGCCATCGGGCGGATGGTGAGGTCCGTCGAGCGGCTCCGGGAGCTGGTCATCTACTGCCCCTTCTCCATGGCCCGCCTGCCCGAGTGGCTGGCCCTGCGGAGCACCTCGCTCAGGGTGCTCGAGCTGCGGATGGACGCCGCCGCCGCCGATAAGGCGGAGGACGGCGGGTACCTGGACTGCATTGGCCTGGCCAGGGGCCTGGAGGAGCTCAGGCTCTGGGGGGTCTCGCTCACGGCCGCGCCGGCGTGGGGCCGGCTGGACAAGCTCCGCGTGCTGGAGATCGTCGGCGCCCCGCTAGAGGACAGCGCCGTGAAGGACGCCATCTCCGCGTGCCCCAACCTCACCGACCTGTCGCTGCTTGGATGCGACTGCTCGGGCGCGGTGTCCATCGAACTCGCGCTGCTCGAGCGATGCCGGCTTGACTTCCTCGGAGCCGGCAACTGCTCCCTCTCGCTCGCCGCTCCCCGCGTCGAGTCACTCGAGGTCCAGGGCTTCACCTGGATTACTCTGCGCGGTGGTCACAGCCTCCGCCGCCTCTCAATCGCCAAAAGCACAGGG AGGGTGTACAAGGTGGACACCGGGAAGCTCCCAGATCTGGAGCACCTCTCTCTACGCGGTGTCCAGTGGAGCTGGGCTGCAGTAAGCTCTGTGCTGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATTGAGTTCAGTGGCGACTTTGACGCGCTCCAGCCATTCCCGGAA GTCGA TTTGGTCGACTTCTTCAACAGCCACCCGAATCTCCGCAAGTTTGATATTCATGGTGCCATGTTTGCTGCTCTGTGCCAGAAAAACAGCTTGAAGAATTTAGATGCAAGGTTCTGCATCCCTTGCTTGGAAGAGGTTTTGATCACAGTGCGCTCACCACTAAATGCTGAGCAGAAGCTGAACACCCTCGAGTCGCTTGTGAAGTATAGCGTGAGGCTGCGCTCTATGGTCATCAGAATCTCGCAGATGAAGAATTGCCATGATGCCGCTGATGATTTCTTTGAGGAGATATGTAAGTTCAAATACATGAACAACAAGAAAGTCCGGGTTGAATAAAACAAGATGCCGTGTGATTCTTTCATCAAATTGATTTGGTTAAGAACTAGTTTTTTTC TTTCAATTTACCGTCACTTCAATAGAGGATGTGTGTCAATCCTTCTCGAGTAACTTATATTATGTTGTTTACCTGATTGAGTTCAAATGCTGGA                                                      ]
[+] EMBL AA752492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cgagCGAACTCGCGCTGCTCGAGCGATGCCGGCTTGACTTCCTCGGAGCCGGCAACTGCTCCCTCTCGCTCGCCGCTCCCCGCGTCGAGTCACTCGAGGTCCAGGGCTTCACCTGGATTACTCTGCGCGGTGGTCACAGCCTCCGCCSSCTCTCAATCGCCAAAAGCACAGGGRRGGGKGTACAAGGKGGACACGGGGAAGCTCCCAGATCTGGAGCACCTCTCTCTACGC GTGTCCAGTDGAGCTGGGCTGCAGTAAGCYCTGTGCTGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATWKAGTTCAGTSGCGAYTTTGACG TCTYCAGCCATTCCCGGAAGGTCGATTTTGGTCGAYTTYTTCAACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA765275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCTGCAGTAAGCTCTGTGCTGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATTGAGTTCAGTGGCGACTTTGACGCGCTCCAGCCATTCCCGGAA GTCGA TTTGGTCGACTTCTTCAACAGCCACCCGAATCTCCGCAAGTTTGATATTCATGGTGCCATGTTTGCTGCTCTGTGCCAGAAAAACAGCTTGAAGAATTTAGATGCAAGGTTCTGCATCCCTTGCTTGGAAGAGGTTTTGATCACAGTGCGCTCACCACTAAATGCTGAGCAGAAGCTGAACACCCTCGAGTCGCTTGTGAAGTATAGCGTGAGGCTGCGCTCTATGGTCATCAGAATCTCGCAGATGAAGAATTGCCATGATGCCGCTGATGATTTCTTTGAGGAGATATGTAAGTTCAAATACATGAACAACAAGAAAGTCCGGGTTGAATAAAACAAGATGCCGTGTGATTCTTTCATCAAATTGATTTGGTTAAGAACTAGTTTTTTTCATTTCAATTTACCGTCACTTCAATAGAGGATGTGTGTCAATCCTTCTCGAGTAACTTATATTATGTTGTTTACCTGATTGAGTTCAAATGCTGGAGCTTGTTGGTAGAACAATTTTGATTGNTGTGCTTGGAATTTTGAAAACTGTGCT]




>consensus_5982#0
CCAACCAGAGGAAAAACCCATGGGAGAGACATTGTCAGGAAGGACACGAAGCCTTGACAA
TCGGTCCAAGCCCACGGCCCATTTCCCCACGACAGCCGCCCGCCGCCGCCGCCAACCCCA
AAAGGGCGCGAGCGGCGAGGCGTTTCGTCGAGCACATGGAGGGCGGCGGCGGAGGCGGTA
CGGACATGAACGCCGTGCCGGATGGCGTCGTGCAGCACGTCCTGTCGATGCTCAGCAACG
TCCGCGACGTGGCGGCGTGCGCCTGCGTGTGCCGCCGCTGGCGCGAGTGCGTGCCGTACC
TGCCGGCGCTCTTCTTCCCGAGGAACGCCTTCGACACGGCCGCGGCGGCGGGGGGCGCCG
CGGACGACGCCATCGGGCGGATGGTGAGGTCCGTCGAGCGGCTCCGGGAGCTGGTCATCT
ACTGCCCCTTCTCCATGGCCCGCCTGCCCGAGTGGCTGGCCCTGCGGAGCACCTCGCTCA
GGGTGCTCGAGCTGCGGATGGACGCCGCCGCCGCCGATAAGGCGGAGGACGGCGGGTACC
TGGACTGCATTGGCCTGGCCAGGGGCCTGGAGGAGCTCAGGCTCTGGGGGGTCTCGCTCA
CGGCCGCGCCGGCGTGGGGCCGGCTGGACAAGCTCCGCGTGCTGGAGATCGTCGGCGCCC
CGCTAGAGGACAGCGCCGTGAAGGACGCCATCTCCGCGTGCCCCAACCTCACCGACCTGT
CGCTGCTTGGATGCGACTGCTCGGGCGCGGTGTCCATCGAACTCGCGCTGCTCGAGCGAT
GCCGGCTTGACTTCCTCGGAGCCGGCAACTGCTCCCTCTCGCTCGCCGCTCCCCGCGTCG
AGTCACTCGAGGTCCAGGGCTTCACCTGGATTACTCTGCGCGGTGGTCACAGCCTCCGCC
GCCTCTCAATCGCCAAAAGCACAGGGAGGGTGTACAAGGTGGACACCGGGAAGCTCCCAG
ATCTGGAGCACCTCTCTCTACGCGGTGTCCAGTGGAGCTGGGCTGCAGTAAGCTCTGTGC
TGCAGTGTGCGAGGGATGTGAAGCACCTAGTGATGAAAATTGAGTTCAGTGGCGACTTTG
ACGCGCTCCAGCCATTCCCGGAAGTCGATTTGGTCGACTTCTTCAACAGCCACCCGAATC
TCCGCAAGTTTGATATTCATGGTGCCATGTTTGCTGCTCTGTGCCAGAAAAACAGCTTGA
AGAATTTAGATGCAAGGTTCTGCATCCCTTGCTTGGAAGAGGTTTTGATCACAGTGCGCT
CACCACTAAATGCTGAGCAGAAGCTGAACACCCTCGAGTCGCTTGTGAAGTATAGCGTGA
GGCTGCGCTCTATGGTCATCAGAATCTCGCAGATGAAGAATTGCCATGATGCCGCTGATG
ATTTCTTTGAGGAGATATGTAAGTTCAAATACATGAACAACAAGAAAGTCCGGGTTGAAT
AAAACAAGATGCCGTGTGATTCTTTCATCAAATTGATTTGGTTAAGAACTAGTTTTTTTC
TTTCAATTTACCGTCACTTCAATAGAGGATGTGTGTCAATCCTTCTCGAGTAACTTATAT
TATGTTGTTTACCTGATTGAGTTCAAATGCTGGAGCTTGTTGGTAGAACAATTTTGATTG
NTGTGCTTGGAATTTTGAAAACTGTGCT
clustalw multiple alignements is not computed in this case