These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_599#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 4119 fasta sequence [GCTGCTGCTCCGGCGGCGGCGCCGCCCTCCACCCCACCCCACCCCGGGCGCGCGCCACCGGATGAGCACTACCATGGGCGTGCCTTACCGCGGTTCCGTTTCGTCCTTCTCCATTTCGAACAATGCAACCACCACCGCCGCCGCCGCCGCCGCTGTGCGGCCGACCTCGCGTGGTTTCGCCGCCTCAACCCTCAGGTCGCCGGCCACCACCGCACCACCATTCCCGACCACTCCGACCTCCAAGGATCAGAGAATTGAGGGGGAGTGATTGGGCTTGATTTCCTCCTGCTGGGGAGGCTCATATGAGTTCCTGGCAAGGTTTCTTCCCCTTAGGCAGCAGCAACTCAAGCACAAGGTTGTTTTTTTTAGGAGAACGACGACAGAAGACCTGCCGGAATTTTAATTGAAGGGAGAAAAAAAATTCAAAAGCGCAAGGTTGTATGTTGGCATTTGGTACAATAAACATCCCCAACCGCACCGTCGTCTGGGTTGCCAATCGAAACAGCCCCATCATGAATCAATCGTCCGCGATGCTGTCACTGACCGACCAGGGCGAGATAGTTGCGTCTGATTCATTAGGTGGCACTCTATGGAAGATGAACAGCAGCAAGAACATTGCTGGTGGAGGTACTAGATCATCCGCGACGGTGTTGCTTAACACGGGGAACCTGGTCATCCGGTCATTCGATGGAACCATCATGTGGGAGAACTTTGATCGCCCAACTGACACTTTCCTACCTGGCATGAAAATCTGGTTGCTCCGTGATGATCATATTGCCGTTGAGCCCTTTCATTTCTTGGAAGAGCCCCGATGACCCTTCCAATGGTGACTTCTCCCTTGGTAGTGGCTTGAAGCCATACCCTCAGCTCTTTGTGCGGCATGGATTTAATCCCTGTTGGCGTGGATCAGGCTCAACGTGGAATGGACCTTTACTCAAAAAGCTTTTTGTTGTATTTGGCTCCTATCAGGGATAAGAATTACTCATACCTGATGATCTCTACATCGTACAGTTCAACAAGTGTGCGCTTTGTACTGGACAGCTCCGGCAAAGTGCAGTTTCTGAGCTGGGACCCTGGTCACTCACTGTGGGCAGTACAGTACATCTTATCTGTTCAAGGTTGCGGTCGCTATGGCTCATGTGGCCCATATGGTCATTGCGACTTGACAGGCGTCCATACATGCAAGTGCCTTGATGGATTTGAACCTGTCTCCGGTAACTCCTCACAAGGCTGTCGAGAAAGGAGGAGCTGCGATGTGGTGATCATGAGCATTTCTTGCTGTTGCCTGGCATGAAATTGCCAGATAAGTTCGTGTACATCAGTGGTATAAGCTTTGAGGAGTGCACAGTGTTATGCAGTAGGAACTGTTCGTGCACAGCTTATGCTTACACCAATTCAACAAGTTTACTTCCACCCCAGTGCTTGCTATGGATGGGAGAGCTTATTGACACAGCAAAGCTTGGTGAAAATGGTGAGAATTTATATCTCCGGCTTGCCAGTCCAGTTGTAGGTAGGATAAAATGTAGTTGGTGTGTGAAATTTGTATTGGATGTTCTCCTCTACCTTGATGTTGGTCACTTCGGGCATATCACTAAATGGCCTGCAGGAAGAGAGAAAAAAAGGCATGATCAAGTTGTTTATTCTGAAACCAAGGTCTGTTCTCATGAAGACATACAAAAGAAACTATGTGGATATTACTTATTAATTAACATTGGTGTCCTCTTGACTTTAATTCGAACCCCCACAAGCCAATTGCCAGAGGATGGAAATGGGAATAATATATTTTTCATGGAATTAATCTCAGAAAGAGCAAATGGAGGATAATGGAAATAGTACTGCCTTTTGTGTCACACATGCTGATGCTCTTATGTCTATGGCTGGTATGGATCTGCCACTGCAAAGGCAAACAAGAAAACTAGGAGATTTCAAAAAGCCAAATGCAAAGAGCTTGGAGTGTTTCAGAAGGACTTGGGGGAAACAAAGGTAGAATTTCCTGTTATAAGCTTTAGAGAAATTACTGTTGCAACCCAATATTTGGCTGATTCCAATATTCTCGGGCGAGGAGGTTTGGGCAATTTTTACAAGGGAACATTGGAAGGTGGTACTGAGATGGCAGTGAAAAGGCTAAGCAAGAGTTCTGGCCAAGGATTAGAGGAGTTCAGAATGAAGTGATTCTAATTGCCAAGTTGCAACACAGAAACCTAATGCAAGAAAATCAATGCTTGATGGGCCAACAAGATTTAAGACAATAAAGGGAGTAGCCAAAGGACTTCTTTATCTCCACCAAGATTCAAGATTAACAGTAGTTCACAGGGATCTCAAAGCTAGCAACAAATTGCTGGATGCTGACATGAGCCCCAAGGCATGGAGTTCATGGAAAGATCAGAACACAAAGGATTTAGTCGACTCGTCAATCTCAGGGAGTTGCTCACTTGATGAAATTTCACGGTGTATCCATCTGGGGCTTTTGTGTGTTCAGGACAACCCAAATTCTCGACCAATAGAGAACTTACATCAGCAGTATAATATCAATTGTTCTTTTTTTTGCGGGGATAATATCAATTGTTCATATTCTAGTTTTCTAACCTTTTTCTGAACTTGCTAAAATATAAATATGTCAATTGTTCCCAGCTTAGCACCGAAGATGGATCTGAACCTGGATGGCTTTCGCATGGGTAACAGGAAAACAACCGATATCCTAGAATTTGTACTACCAGCTGTGGCAAGTTTGCTGATACTGATATGCATGCTTATTTGGATCTGCGGCGTTCGAGGTAAACAAAGGGGCGATGAGATCTACGGTGGGCTGATGCTGGGAGATATTAGCACCTCCCGTGAGCTCTCTGATAGAAAAGTAGATTTTCCAATTTTTAGCTTCAGAGAAATTGCTTCCGCGACAAATAATTTCTCTGATTCCAACATACTTGGTCATGGAGGATTTGGCACTGTTTACAAGGGAACAATGGATGGTGATAAGGAAATTGCTGTCAAAAGGCTCAGTAAAGGTTCTGCACAAGGTGTAGTGGAATTCAAAAACGAAGTACTTCTGATTGCCAAGTTGCAACACAGAAACTTAGTTAAACTTCTTGGTTGCTGCATTCATGGAGATGAAAAACTATTAGTTTATGAATACCTACCTAACAAAAGCTTGGATGCCTTCCTTTTCAATGCTTCAAGAAATTCAGCGCTTGACTGGACGACAAGGTTCAAGATAATAAAAGGTGTTGCTCGAGGCATTCTTTATCTCCACCAGGACTCAAGACTGACAATAATTCATAGAGATCTTAAAGCAAGCAATGTATTGTTGGATGCTGATATGCACCCCAAGATATCTGATTTTGGTACAGCCAGGATCTTTGGTGGGAACGAACAACAATCAAATACCAACAGAGTGGTTGGAACATATGGCTACATGGCGCCTGAATATGCACTGGAAGGCATAATATCCGTCAAATCAGACGTCTATAGCTTCGGTGTGCTACTCCTGGAGATTGTGAGTGGCTTGAAGATCAGCGGAATCATAGACCCAACCACGGGCCATTCCAACCTCATAGCCTATGCATGGAGCTTATGGAAGAACGGGAACATGAGTACTTTTGTTGACGCCTCGATCTCGGAGAGTTCTTCACTCAATGAAGCTCTAAGATGCATCCATATAGCGCTCTTGTCGATACAAAACAACCCGAATGCTCGGCCACTCATGTCGTGGGTGGTTTCGAGCTTGGATAACAAAGACATCGAGCTCCCAGAGCCCAAAGAGCCTATGTACTTTGCACACAGGAGTTATGGAGCTGATGGAGCAGGCGAAAGCTTTGTGAATGACATGAGCATTGCATCGGTGGAAGCGCGCTAGAAATTATCTAAACTATATATGTATAGTAGCTTTGATAAGGTATTTCATTTTCATATCTATTGAACCAAGTGGTAGCTCAAAAATAGTGAGAGAGAGCAAATATTTGTGGTGAGCAAAGAGTAGCTCTGTATCTGTCTGAATGGCATCTTGGCCTGATTGGCTCTGATATGTTCATTGACTCATTGTATTGTATCTGTACCCCAAGTGCTCATATCAAGAAAGAGTAGGCGAAACCTTTCTCTGTCAGGAAAAAAAAAATAAAAAGA] [+] EMBL AK122092 [GCTGCTGCTCCGGCGGCGGCGCCGCCCTCCACCCCACCCCACCCCGGGCGCGCGCCACCGGATGAGCACTACCATGGGCGTGCCTTACCGCGGTTCCGTTTCGTCCTTCTCCATTTCGAACAATGCAACCACCACCGCCGCCGCCGCCGCCGCTGTGCGGCCGACCTCGCGTGGTTTCGCCGCCTCAACCCTCAGGTCGCCGGCCACCACCGCACCACCATTCCCGACCACTCCGACCTCCAAGGATCAGAGAATTGAGGGGGAGTGATTGGGCTTGATTTCCTCCTGCTGGGGAGGCTCATATGAGTTCCTGGCAAGGTTTCTTCCCCTTAGGCAGCAGCAACTCAAGCACAAGGTTGTTTTTTTTAGGAGAACGACGACAGAAGACCTGCCGGAATTTTAATTGAAGGGAGAAAAAAAATTCAAAAGCGCAAGGTTGTATGTTGGCATTTGGTACAATAAACATCCCCAACCGCACCGTCGTCTGGGTTGCCAATCGAAACAGCCCCATCATGAATCAATCGTCCGCGATGCTGTCACTGACCGACCAGGGCGAGATAGTTGCGTCTGATTCATTAGGTGGCACTCTATGGAAGATGAACAGCAGCAAGAACATTGCTGGTGGAGGTACTAGATCATCCGCGACGGTGTTGCTTAACACGGGGAACCTGGTCATCCGGTCATTCGATGGAACCATCATGTGGGAGAACTTTGATCGCCCAACTGACACTTTCCTACCTGGCATGAAAATCTGGTTGCTCCGTGATGATCATATTGCCGTTGAGCCCTTTCATTTCTTGGAAGAGCCCCGATGACCCTTCCAATGGTGACTTCTCCCTTGGTAGTGGCTTGAAGCCATACCCTCAGCTCTTTGTGCGGCATGGATTTAATCCCTGTTGGCGTGGATCAGGCTCAACGTGGAATGGACCTTTACTCAAAAAGCTTTTTGTTGTATTTGGCTCCTATCAGGGATAAGAATTACTCATACCTGATGATCTCTACATCGTACAGTTCAACAAGTGTGCGCTTTGTACTGGACAGCTCCGGCAAAGTGCAGTTTCTGAGCTGGGACCCTGGTCACTCACTGTGGGCAGTACAGTACATCTTATCTGTTCAAGGTTGCGGTCGCTATGGCTCATGTGGCCCATATGGTCATTGCGACTTGACAGGCGTCCATACATGCAAGTGCCTTGATGGATTTGAACCTGTCTCCGGTAACTCCTCACAAGGCTGTCGAGAAAGGAGGAGCTGCGATGTGGTGATCATGAGCATTTCTTGCTGTTGCCTGGCATGAAATTGCCAGATAAGTTCGTGTACATCAGTGGTATAAGCTTTGAGGAGTGCACAGTGTTATGCAGTAGGAACTGTTCGTGCACAGCTTATGCTTACACCAATTCAACAAGTTTACTTCCACCCCAGTGCTTGCTATGGATGGGAGAGCTTATTGACACAGCAAAGCTTGGTGAAAATGGTGAGAATTTATATCTCCGGCTTGCCAGTCCAGTTGTAGGTAGGATAAAATGTAGTTGGTGTGTGAAATTTGTATTGGATGTTCTCCTCTACCTTGATGTTGGTCACTTCGGGCATATCACTAAATGGCCTGCAGGAAGAGAGAAAAAAAGGCATGATCAAGTTGTTTATTCTGAAACCAAGGTCTGTTCTCATGAAGACATACAAAAGAAACTATGTGGATATTACTTATTAATTAACATTGGTGTCCTCTTGACTTTAATTCGAACCCCCACAAGCCAATTGCCAGAGGATGGAAATGGGAATAATATATTTTTCATGGAATTAATCTCAGAAAGAGCAAATGGAGGATAATGGAAATAGTACTGCCTTTTGTGTCACACATGCTGATGCTCTTATGTCTATGGCTGGTATGGATCTGCCACTGCAAAGGCAAACAAGAAAACTAGGAGATTTCAAAAAGCCAAATGCAAAGAGCTTGGAGTGTTTCAGAAGGACTTGGGGGAAACAAAGGTAGAATTTCCTGTTATAAGCTTTAGAGAAATTACTGTTGCAACCCAATATTTGGCTGATTCCAATATTCTCGGGCGAGGAGGTTTGGGCAATTTTTACAAGGGAACATTGGAAGGTGGTACTGAGATGGCAGTGAAAAGGCTAAGCAAGAGTTCTGGCCAAGGATTAGAGGAGTTCAGAATGAAGTGATTCTAATTGCCAAGTTGCAACACAGAAACCTAATGCAAGAAAATCAATGCTTGATGGGCCAACAAGATTTAAGACAATAAAGGGAGTAGCCAAAGGACTTCTTTATCTCCACCAAGATTCAAGATTAACAGTAGTTCACAGGGATCTCAAAGCTAGCAACAAATTGCTGGATGCTGACATGAGCCCCAAGGCATGGAGTTCATGGAAAGATCAGAACACAAAGGATTTAGTCGACTCGTCAATCTCAGGGAGTTGCTCACTTGATGAAATTTCACGGTGTATCCATCTGGGGCTTTTGTGTGTTCAGGACAACCCAAATTCTCGACCAATAGAGAACTTACATCAGCAGTATAATATCAATTGTTCTTTTTTTTGCGGGGATAATATCAATTGTTCATATTCTAGTTTTCTAACCTTTTTCTGAACTTGCTAAAATATAAATATGTCAATTGTTCCCAGCTTAGCACCGAAGATGGATCTGAACCTGGATGGCTTTCGCATGGGTAACAGGAAAACAACCGATATCCTAGAATTTGTACTACCAGCTGTGGCAAGTTTGCTGATACTGATATGCATGCTTATTTGGATCTGCGGCGTTCGAGGTAAACAAAGGGGCGATGAGATCTACGGTGGGCTGATGCTGGGAGATATTAGCACCTCCCGTGAGCTCTCTGATAGAAAAGTAGATTTTCCAATTTTTAGCTTCAGAGAAATTGCTTCCGCGACAAATAATTTCTCTGATTCCAACATACTTGGTCATGGAGGATTTGGCACTGTTTACAAGGGAACAATGGATGGTGATAAGGAAATTGCTGTCAAAAGGCTCAGTAAAGGTTCTGCACAAGGTGTAGTGGAATTCAAAAACGAAGTACTTCTGATTGCCAAGTTGCAACACAGAAACTTAGTTAAACTTCTTGGTTGCTGCATTCATGGAGATGAAAAACTATTAGTTTATGAATACCTACCTAACAAAAGCTTGGATGCCTTCCTTTTCAATGCTTCAAGAAATTCAGCGCTTGACTGGACGACAAGGTTCAAGATAATAAAAGGTGTTGCTCGAGGCATTCTTTATCTCCACCAGGACTCAAGACTGACAATAATTCATAGAGATCTTAAAGCAAGCAATGTATTGTTGGATGCTGATATGCACCCCAAGATATCTGATTTTGGTACAGCCAGGATCTTTGGTGGGAACGAACAACAATCAAATACCAACAGAGTGGTTGGAACATATGGCTACATGGCGCCTGAATATGCACTGGAAGGCATAATATCCGTCAAATCAGACGTCTATAGCTTCGGTGTGCTACTCCTGGAGATTGTGAGTGGCTTGAAGATCAGCGGAATCATAGACCCAACCACGGGCCATTCCAACCTCATAGCCTATGCATGGAGCTTATGGAAGAACGGGAACATGAGTACTTTTGTTGACGCCTCGATCTCGGAGAGTTCTTCACTCAATGAAGCTCTAAGATGCATCCATATAGCGCTCTTGTCGATACAAAACAACCCGAATGCTCGGCCACTCATGTCGTGGGTGGTTTCGAGCTTGGATAACAAAGACATCGAGCTCCCAGAGCCCAAAGAGCCTATGTACTTTGCACACAGGAGTTATGGAGCTGATGGAGCAGGCGAAAGCTTTGTGAATGACATGAGCATTGCATCGGTGGAAGCGCGCTAGAAATTATCTAAACTATATATGTATAGTAGCTTTGATAAGGTATTTCATTTTCATATCTATTGAACCAAGTGGTAGCTCAAAAATAGTGAGAGAGAGCAAATATTTGTGGTGAGCAAAGAGTAGCTCTGTATCTGTCTGAATGGCATCTTGGCCTGATTGGCTCTGATATGTTCATTGACTCATT ] [-] EMBL CB635877 [ CAGCCAGGATCTTTGGTGGGAACGAACAACAATCAAATACCAACAGAGTGGTTGGAACATATGGCTACATGGCGCCTGAATATGCACTGGAAGGCATAATATCCGTCAAATCAGACGTCTATAGCTTCGGTGTGCTACTCCTGGAGATTGTGAGTGGCTTGAAGATCAGCGGAATCATAGACCCAACCACGGGCCATTCCAACCTCATAGCCTATGCATGGAGCTTATGGAAGAACGGGAACATGAGTACTTTTGTTGACGCCTCGATCTCGGAGAGTTCTTCACTCAATGAAGCTCTAAGATGCATCCATATAGCGCTCTTGTCGATACAAAACAACCCGAATGCTCGGCCGCTCATGTCGTGGGTGGTTTCGAGCTTGGATAACAAAGACATCGAGCTCCCAGAGCCCAAAGAGCCTATGTACTTTGCACACAGGAGTTATGGAGCTGATGGAGCAGGCGAAAGCTTTGTGAATGACATGAGCATTGCATCGGTGGAAGCGCGCTAGAAATTATTTAAACTATATATGTATAGTAGCTTTGATAAGGTATTTCATTTTCATATCTATTGAACCAAGTGGTAGCTCAAAAATAGT GAGAGAGCAAATATTTGTGGTGAGCAAAGAGTAGCTCTGTATCTGTCTGAATGGCATTTTGGCCTGATTGGCTTTGATATGTTCATTGACTCATTGTATTGTATCTGTACCCCAAGTGCTCATATCAAGAAAGAGTAGGCGAAACCTTTCTCTGTCAGGAAAAAAAAAATAAAAAGA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||