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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6007 cluster # 6007       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6007#0 length = 1100 sequences # 3  

consensusID : consensus_6007#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1100
fasta sequence
                              [CTGGAGTAGTAACGTAACCAAGAGGGGAAGAGAGATGGCGATGGCGATGCAGGAGGAGCAGAGGGTGGTGGTGATGCGTCACGGCGACCGCGTGGACCACGCGGATCCATTGTGGGCCGCCAACAACCCCCGCCCCTGGGATCCGCCGCTCACCGACGCCGGCCTCCTCCGCGCCTCCACCGTCGCCAGTCGCATCCTCGCCGACGGCTTCCACATCCACCGCGTCCTCGTCTCCCCCTTCATCCGCTGCCTCCAGACCGCCGCCCAGGCCATCGCCGCGCTCTCCCCCCTGCCCCGTATCAACATCAAGGTTTCAATTGAATATGGGTTGTCCGAGATGATGAACACTCAAGCAATGGGCATTCTAGTCAGCCAGATAGCTCCAAGCATCGACAGGTGGTTTCCTGACA-TGTCACAACTGGAAGCTGCTTTGCCAGCTGCTACCATTGATCACTCCGCGGAGCCACTCTACCAGGAGGTACCTAAGTGGGGGGAATCTGTTTGGGAAGCAAGAAGCAGATA-TGCTAGTGTAATCAAGGCTCTTGCTGACAAATACCCTGATGAGAACCTACTTCTGGTGACGCATGGTGAGGGTGTTGGTGCATCGGTGTCATTCTTTGAGCCAGGCGTGGAGATTTACGAGGTGGAGTATTGTGCCTACTCTGTCCTGGGAAGGCAGCAGCACAAGGTCGGGATTGAACAAGGAAGCGAGGAGGAAGGGTTGAAGAATCTGAGAGTGCTGAGCACAAGTGGACCTACAGGCATCCACTACTACTACACTACCCCAGCACCATCTGAGGTCCCCGACCGTTAGGAATTCTCCTCTGCTGCTCAGCCTCAGCCTCCGCCTCCGCAGCAAGAGCTCTGAGACACCTCTTCAGCGACTAGT-AATTTTCCTTCACTTGTGCTAGTATTTATTTACCACCCGTGTGCCATTTGCATAGACGAGATTCTG-ATGGTTTTTTCTTTATGTACTCTGCGTATACAAATAAGATCATGTTCTTTTAAACCAAGGATATATAGTAGTAGAAGAATTGGCCGTATCGATGGTTTGGGTAAGCAATNCNGAATACAGAAAAACTGTCTTTNATGAAAAAAAA]

[+] EMBL AK109299             [CTGGAGTAGTAACGTAACCAAGAGGGGAAGAGAGATGGCGATGGCGATGCAGGAGGAGCAGAGGGTGGTGGTGATGCGTCACGGCGACCGCGTGGACCACGCGGATCCATTGTGGGCCGCCAACAACCCCCGCCCCTGGGATCCGCCGCTCACCGACGCCGGCCTCCTCCGCGCCTCCACCGTCGCCAGTCGCATCCTCGCCGACGGCTTCCACATCCACCGCGTCCTCGTCTCCCCCTTCATCCGCTGCCTCCAGACCGCCGCCCAGGCCATCGCCGCGCTCTCCCCCCTGCCCCGTATCAACATCAAGGTTTCAATTGAATATGGGTTGTCCGAGATGATGAACACTCAAGCAATGGGCATTCTAGTCAGCCAGATAGCTCCAAGCATCGACAGGTGGTTTCCTGACA TGTCACAACTGGAAGCTGCTTTGCCAGCTGCTACCATTGATCACTCCGCGGAGCCACTCTACCAGGAGGTACCTAAGTGGGGGGAATCTGTTTGGGAAGCAAGAAGCAGATA TGCTAGTGTAATCAAGGCTCTTGCTGACAAATACCCTGATGAGAACCTACTTCTGGTGACGCATGGTGAGGGTGTTGGTGCATCGGTGTCATTCTTTGAGCCAGGCGTGGAGATTTACGAGGTGGAGTATTGTGCCTACTCTGTCCTGGGAAGGCAGCAGCACAAGGTCGGGATTGAACAAGGAAGCGAGGAGGAAGGGTTGAAGAATCTGAGAGTGCTGAGCACAAGTGGACCTACAGGCATCCACTACTACTACACTACCCCAGCACCATCTGAGGTCCCCGACCGTTAGGAATTCTCCTCTGCTGCTCAGCCTCAGCCTCCGCCTCCGCAGCAAGAGCTCTGAGACACCTCTTCAGCGACTAGT AATTTTCCTTCACTTGTGCTAGTATTTATTTACCACCCGTGTGCCATTTGCATAGACGAGATTCTG ATGGTTTTTTCTTTATGTACTCTGCGTATACAAATAAGATCATGTTCTTTTAAACCAAGGATATATAGTAGTAGAAGAATTGGCCGTATCGATGGT                                                 ]
[+] EMBL AU182695             [                                                                           GCGTCACGGCGACCGCGTGGACCACGCGGATCCATTGTGGGCCGCCAACAATCCCCGCCCCTGGGATCCGCCGNTCACCGACGCCGGCCTCCTCCGCGCCTCCACCGTCGCCAGTCGCATCCTCGCCGACGGCTTCCACATCCACCGCGTCCTCGTCTCCCCCTTCATCCGCTGCCTCCAGACCGCCGCCCAGGCCATCGCCGCGCTCTCCCCCCTGCCCCGTATCAACATCAAGGTTTCAATTGAATATGGGTTGTCCGAGATGATGAACACTCAAGCAATGGGCATTCTAGTCAGCCAGATAGCTCCAAGCATCGACAGGTGGTTTCCTGACATTGTCACAACTGGAAGCTGCTTTGCCAGCTGCTACCATTGATCACTCCGCGGAGCCACTCTACCAGGAGGTACTTAAGTGGGGGGAATCTGTTTGGGAAGCAAGAAGCAGATATTGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU182696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTCAGCGNCTAGTAAATTTTCCTTCNCTTGTGCTAGTATTTATTTACCNCCCGTGTNCCATTTGCATAGACGAGANTCTGCATGGTTTTTTCTTTATGTACTCTGCGTATACNAATAAGATCATGTTCTTTTAAACTCAGNATATATAGTAGTAGAAGAATTGGCCGTATCGATGGTTTGGGTAAGCAATNCNGAATACAGAAAAACTGTCTTTNATGAAAAAAAA]


>consensus_6007#0 CTGGAGTAGTAACGTAACCAAGAGGGGAAGAGAGATGGCGATGGCGATGCAGGAGGAGCA GAGGGTGGTGGTGATGCGTCACGGCGACCGCGTGGACCACGCGGATCCATTGTGGGCCGC CAACAACCCCCGCCCCTGGGATCCGCCGCTCACCGACGCCGGCCTCCTCCGCGCCTCCAC CGTCGCCAGTCGCATCCTCGCCGACGGCTTCCACATCCACCGCGTCCTCGTCTCCCCCTT CATCCGCTGCCTCCAGACCGCCGCCCAGGCCATCGCCGCGCTCTCCCCCCTGCCCCGTAT CAACATCAAGGTTTCAATTGAATATGGGTTGTCCGAGATGATGAACACTCAAGCAATGGG CATTCTAGTCAGCCAGATAGCTCCAAGCATCGACAGGTGGTTTCCTGACATGTCACAACT GGAAGCTGCTTTGCCAGCTGCTACCATTGATCACTCCGCGGAGCCACTCTACCAGGAGGT ACCTAAGTGGGGGGAATCTGTTTGGGAAGCAAGAAGCAGATATGCTAGTGTAATCAAGGC TCTTGCTGACAAATACCCTGATGAGAACCTACTTCTGGTGACGCATGGTGAGGGTGTTGG TGCATCGGTGTCATTCTTTGAGCCAGGCGTGGAGATTTACGAGGTGGAGTATTGTGCCTA CTCTGTCCTGGGAAGGCAGCAGCACAAGGTCGGGATTGAACAAGGAAGCGAGGAGGAAGG GTTGAAGAATCTGAGAGTGCTGAGCACAAGTGGACCTACAGGCATCCACTACTACTACAC TACCCCAGCACCATCTGAGGTCCCCGACCGTTAGGAATTCTCCTCTGCTGCTCAGCCTCA GCCTCCGCCTCCGCAGCAAGAGCTCTGAGACACCTCTTCAGCGACTAGTAATTTTCCTTC ACTTGTGCTAGTATTTATTTACCACCCGTGTGCCATTTGCATAGACGAGATTCTGATGGT TTTTTCTTTATGTACTCTGCGTATACAAATAAGATCATGTTCTTTTAAACCAAGGATATA TAGTAGTAGAAGAATTGGCCGTATCGATGGTTTGGGTAAGCAATNCNGAATACAGAAAAA CTGTCTTTNATGAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)