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Oryza sativa
cluster # 6029 cluster # 6029       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6029#0 length = 1226 sequences # 3  

consensusID : consensus_6029#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1226
fasta sequence
                              [GGCTCATGCTCGCCGCTCCGCTTGCTGCTCTGCTCTTGCAGCTCCCGATCCCAATCAGCCTCGAGCCCCGCAGCACGGACACCGCCGCCGCCGCCGCCATGGACGCCGCCGCTTCCGAGATCGAGTACGATATGCCCGGCGTCCTGCGCATGTACAAGGACGGCCGCGTCGAGCGCTTCCACGGCACGCACACCGTCCCGCCATCCCCATCCGGCGACCCCGCCAACGGCGTAATGTCCAAGGACGTCGTCCTCGACGCGGCCGCCGGCATCTACGCTCGTGTCTACCTCCCGCCTGGTGTGGAGCCGGGGAACAATCTCCCCGTAGAGGTCTTCTTCCACGGCGGCACGGTCTTGGTCCACACAGCCGCGACCACGGTCTACGACAGGTACGCCGCCTCCCTCGCCGCGGCGGTCCCTGCCGTCGTCGTCTCGGCGGACTACCGCCTCGCCCCGGAGCAGCCCGTCCCGGCCGCCTACGACGACGCGTTCGCCGCCCTCAGGGCGGTCGTCGCTGCGTGCCGCCCCGACGGCGCCGAGCCATGGCTCGCCGCGCACGGCGACGCGTCCCGCGTCGTGCTCGCGGGCGACAGCGCCGGCGCCAACATGGCGCACAACGCGGCGATCCGGCTGCGGAAGGAAGGGATCGAGGGCTACGGCGACAAGGTCAGCGGCGTGGTGCTCCTCCACCCCTACTTCTGGGGGAAGGACCCCGTGGGCGGCGAGTCCACCGACGCCGGCTACCGCGGCTCGTTCCACGGCACGTGGGAGTTCGTCAGCGCCGGCAAGCTCGGCCTCGACCACCCGTGCGTCAACCCGCTGGCGTCGCCGGAGGAGTGGAGGCAGCTCGGGGCCGGCCGCGTCCTGGTCACTACGGCGGAGCACTGCTGGTTCGTGGAGAGGGCGCGCGCGTACGCGGAGGGGATCAAGAAGTGCGGGTGGGACGGCGAGGTGGAGCTCCACGAGACCGATGGCGAGGGCCATGTCTTCTTCTTGCCCAAGCCCGACTGCGACAATGCCGTCAAGGAGCTCGCCGTCGTGACCGATTTCGTCCGGCGCTGTTGAAGCCAGCCGCTTCGGTTATCCCTCGTGTCGCCGGTGAGCGATTATACTACTACTACTCGTAACTAGTAATAAAGGGAGGAATATATACTGTCTATGATTTTGATTCTCATTGATGATTTGCATCATTGAAGTGGAAAAGAAAAGGAATATTTTAGTTGATTA]

[+] EMBL CB664562             [GGCTCATGCTCGCCGCTCCGCTTGCTGCTCTGCTCTTGCAGCTCCCGATCCCAATCAGCCTCGAGCCCCGCAGCACGGACACCGCCGCCGCCGCCGCCATGGACGCCGCCGCTTCCGAGATCGAGTACGATATGCCCGGCGTCCTGCGCATGTACAAGGACGGCCGCGTCGAGCGCTTCCACGGCACGCACACCGTCCCGCCATCCCCATCCGGCGACCCCGCCAACGGCGTAATGTCCAAGGACGTCGTCCTCGACGCGGCCGCCGGCATCTACGCTCGTGTCTACCTCCCGCCTGGTGTGGAGCCGGGGAACAATCTCCCCGTAGAGGTCTTCTTCCACGGCGGCACGGTCTTGGTCCACACAGCCGCGACCACGGTCTACGACAGGTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK062676             [                TCCGCTTGCTGCTCTGCTCTTGCAGCTCCCGATCCCAATCAGCCTCAAGCCCCGCAGCACGGACACCGCCGCCGCCGCCGCCATGGACGCCGCCGCTTCCGAGATCGAGTTCGATATGCCCGGCGTCCTGCGCATGTACAAGGACGGCCGCGTCGAGCGCTTCGACGGCACGCAGACCGTCCCGCCGTCCCCATCCGGCGACCCCGCCAACGGCGTCGTCTCCAAGGACGTCGTCCTCGACCCGGCCGCCGGCATCTCCGCTCGTCTCTACCTCCCGCCTGGTGTGGAGCCGGGGAAGAAGCTCCCCGTCGTGCTCTTCTTCCACGGCGGCGCGTTCTTGGTCCACACCGCCGCGTCCCCGCTCTACCACAGGTACGCCGCCTCCCTCGCCGCGGCGGTCCCTGCCGTCGTCGTCTCGGCGGACTACCGCCTCGCCCCGGAGCAGCCCGTCCCGGCCGCCTACGACGACGCGTTCGCCGCCCTCAGGGCGGTCGTCGCTGCGTGCCGCCCCGACGGCGCCGAGCCATGGCTCGCCGCGCACGGCGACGCGTCCCGCGTCGTGCTCGCGGGCGACAGCGCCGGCGCCAACATGGCGCACAACGCGGCGATCCGGCTGCGGAAGGAAGGGATCGAGGGCTACGGCGACAAGGTCAGCGGCGTGGTGCTCCTCCACCCCTACTTCTGGGGGAAGGACCCCGTGGGCGGCGAGTCCACCGACGCCGGCTACCGCGGCTCGTTCCACGGCACGTGGGAGTTCGTCAGCGCCGGCAAGCTCGGCCTCGACCACCCGTGCGTCAACCCGCTGGCGTCGCCGGAGGAGTGGAGGCAGCTCGGGGCCGGCCGCGTCCTGGTCACTACGGCGGAGCACTGCTGGTTCGTGGAGAGGGCGCGCGCGTACGCGGAGGGGATCAAGAAGTGCGGGTGGGACGGCGAGGTGGAGCTCCACGAGACCGATGGCGAGGGCCATGTCTTCTTCTTGCCCAAGCCCGACTGCGACAATGCCGTCAAGGAGCTCGCCGTCGTGACCGATTTCGTCCGGCGCTGTTGAAGCCAGCCGCTTCGGTTATCCCTCGTGTCGCCGGTGAGCGATTATACTACTACTACTCGTAACTAGTAATAAAGGGAGGAATATATACTGTCTATGATTTTGATTCTCATTGATGATTTGCATCATTGAAGTGGAAAAGAAAAGGAATATTTTAGTTGATTA]
[-] EMBL CB664563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGGCGCACACCGCGGCGATCCGGCTGCGGAAGGAAGGGACCGAGGGCTACGGCGACAAGGTCAGCGGCGTGGTGCTCCTCCACCCCTACTTCTGGGGGAAGGACCCCGTGGGCGGCGAGTCCCCCGACGCCGGCTACCGCGGCTTGTTCCACGGCACGTGGGAGTTCGTCAGCGCCGGCAAGCTCGGCCTCGACCACCCGTGGGTCAACCCCCCGGCGTCGCCGGAGGAGTGGAGGCAGCTCGGGGCCGGCCGCGTCCTGGTCACTCCGGCGGAGCACTGCTGGTTCGTGGAGAGGGCGCGCGCGTACGCGGAGGGGATCAAGAAGTGCGGGTGGGACGGCGAGGTGGAGCTCCACGAGACCGATGGCGAGGGCCATGTCTTCTTCTTGCCCAAGCCCGACTGCGACAATCCCGTCAAGGAGCTCGCCGTCGTGGCCGATTTCCTCCGGCGCTGTTGAACCCACCCGCTTCGGTTATCCCTCGTGTCGCCGGTGAGCCATTATACTCCTGCCACTCGTACCTAGTAATAAAGGGAGGAATATCTTCTGTCTATGATCTGGATTCTCATTGATGATTTGCATCACTGAAGcg                             ]


>consensus_6029#0 GGCTCATGCTCGCCGCTCCGCTTGCTGCTCTGCTCTTGCAGCTCCCGATCCCAATCAGCC TCGAGCCCCGCAGCACGGACACCGCCGCCGCCGCCGCCATGGACGCCGCCGCTTCCGAGA TCGAGTACGATATGCCCGGCGTCCTGCGCATGTACAAGGACGGCCGCGTCGAGCGCTTCC ACGGCACGCACACCGTCCCGCCATCCCCATCCGGCGACCCCGCCAACGGCGTAATGTCCA AGGACGTCGTCCTCGACGCGGCCGCCGGCATCTACGCTCGTGTCTACCTCCCGCCTGGTG TGGAGCCGGGGAACAATCTCCCCGTAGAGGTCTTCTTCCACGGCGGCACGGTCTTGGTCC ACACAGCCGCGACCACGGTCTACGACAGGTACGCCGCCTCCCTCGCCGCGGCGGTCCCTG CCGTCGTCGTCTCGGCGGACTACCGCCTCGCCCCGGAGCAGCCCGTCCCGGCCGCCTACG ACGACGCGTTCGCCGCCCTCAGGGCGGTCGTCGCTGCGTGCCGCCCCGACGGCGCCGAGC CATGGCTCGCCGCGCACGGCGACGCGTCCCGCGTCGTGCTCGCGGGCGACAGCGCCGGCG CCAACATGGCGCACAACGCGGCGATCCGGCTGCGGAAGGAAGGGATCGAGGGCTACGGCG ACAAGGTCAGCGGCGTGGTGCTCCTCCACCCCTACTTCTGGGGGAAGGACCCCGTGGGCG GCGAGTCCACCGACGCCGGCTACCGCGGCTCGTTCCACGGCACGTGGGAGTTCGTCAGCG CCGGCAAGCTCGGCCTCGACCACCCGTGCGTCAACCCGCTGGCGTCGCCGGAGGAGTGGA GGCAGCTCGGGGCCGGCCGCGTCCTGGTCACTACGGCGGAGCACTGCTGGTTCGTGGAGA GGGCGCGCGCGTACGCGGAGGGGATCAAGAAGTGCGGGTGGGACGGCGAGGTGGAGCTCC ACGAGACCGATGGCGAGGGCCATGTCTTCTTCTTGCCCAAGCCCGACTGCGACAATGCCG TCAAGGAGCTCGCCGTCGTGACCGATTTCGTCCGGCGCTGTTGAAGCCAGCCGCTTCGGT TATCCCTCGTGTCGCCGGTGAGCGATTATACTACTACTACTCGTAACTAGTAATAAAGGG AGGAATATATACTGTCTATGATTTTGATTCTCATTGATGATTTGCATCATTGAAGTGGAA AAGAAAAGGAATATTTTAGTTGATTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)