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Oryza sativa
cluster # 6037 cluster # 6037       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6037#0 length = 3208 sequences # 2  
 consensus_6037#1 length = 601 sequences # 1  
consensusID : consensus_6037#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3208
fasta sequence 
                              [TGGCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCATCCCGCGACCGGAGCTCCACCTGTGCCGGCGTCTGCTGCTTCCACCGCATCCTCGCTAGCCTGCCCCGCCGTGAAACTGGACAAGAATGGAGAACATGCAGTATGCTGAAGAACTAGTCAAGGAATTTCTTGTGTTCAGAGGCTTCACGAGTACTCTGCAATCGTACGAGTCGGAATTGTCTACCGAGATCGGGAGGAACTTTCAAGTAGACAAGATCCTAGATTTGGTTTTCTCGGTGTATATACCAAAGTACCAATTGGATAGGTTGCAAGGTCTGTTTACCTTTTTTAAGCAGTGCTTCACTTCACCTGCGGATGCGGAGCTTTTCTCGGCTCTCATTAAATTGGAGCTGTCGGTGTTACGGTATTATGTTGTCAATGCATTGAAATCTGGAAGACAAGACAAAGTAGTTGAATTCTTCGGTGCTAATGGCAATTATCTGCTGCAGAAGCGTGAAGACTGGCAAGCATGGTTTGGTGCGTATTCTTAGTTCCTTTTGCTATATTCCATCAAGTGTCAACCTCATTCTTATCTTCTTGTTCTTAATTGTGATACACAGCTATGCCATATATCACGAGCCCAAGCTTGGATCCACAATTCCGTGTATATTTCTCCAAAGAATGGTCGGACACTTTGATTCTTTCATTCCGAAATTTTTTGAGCGGGATATTTAATGGTCTTCATATCCTTGAACAACATGTTATTTGTTTTATTCTTCTATTCTTCCTCAAGTTGGTAGTAAACATGTTTGCTTTCTATAATATGCAAGAACTCCCTAAATGGGATACAACATAAGTGCATAACACCTTTATCCACATTCTAGTTGATCATCAAGTAAATTGTATTGTATGTTTGTTAATGTGATTGTTACCTATATTTGGGTTAACAAACATATTATGTTTTGCTCAACAATGTTTTCTCCTTAATTTTTCCACGAATTCCAGCTCTTCTCAAAATTAGCACTGAAAAGAATACCATTAAATGCCTAAAGAACGACATAAAGCAACTGAATAACAAATTATCAGAGCTACAAGCATTGTTAGAGATGAAGGAGACTGAAATATCTCAGTTGAGAAGGTAAATCTATGCTCTTTATACATTACACTGCAGCATAACTAATCTGTTTGCACATGCATGCGTAGCTTTTGTGGAGATTGGATGAAACTAGGAAAATTATGTTCACTAATTAATCTAACAGTACCTTCATTTCTTATTACGTTCAGTATCCAGTTAATGTAAAGCATGAAGTAAAATATGATTTCTAACCTCCACCCACATACATACACAGCCTCACACTCGGAAACTAGAAACTGCTGTGTTTCATTTGTTTTCATGCCCTCGCTTGCCTTACCAAGTTAGTTTCGCAGTGGCTGAACAGTTCAAACTCGATATTCAAGCGTCAAGCATTTAGATTCAGAGCACTTCAAACTCATTTCTTGGATTTCACATAAATGTCAACATTACGCTACCTTCTGCCCAAAGGAATTTATGTCTCAATTGATAAATACAGGAATAGTACTGGTGTTGATTTGGGCAACATGAATGTTCCCAACACTAGTGCAGCTGACTCTTCTCTTGAAGGACAAGATATGCCAGGAGTTTTCGAAGAATCCTCAGCTTCGAGAAGCGCTGCACAGGGTTTTGATTCACAGTCTTCGAGCTCAGTGAAATCTTCTACAAGAGATGAGAAATTGCACAAATCTTTTCAAATAAGCAATGCAGAGAACGAGCAGATTTTGGTGACAGAGGATGACTTTCCAGAAGTGAAAGTGGATTTTCAGGAAACATTTTTAGGCCATAACAGTTCAATTAGCTGCTGTCGATTTTCTGCATCTGGATCAAATGTTGCAAGTTCTTCCGTTGATGGTACAGTGAGATCTGACCGCTTGGCACAGCTAATGGTGGCATTAAAGCTTGGAATGCTGATGCAAAGAGAGTTGTTTGCGACCTCAGTACATCAAAAGACTTTCCCAGTGTGTTAGATTTGAAGTGTAGCCCTGTAGAACCTGTGTTTGTCTCTGCAGCTGCATCTAGACGGCCTGGATCAACTATATTTGACAGAACAGGATTTGCTTCCTTGACTGTATGGCATATGAAAACATGGAAACCTCTGACAGTTCTACCACTTGGGGAGGACCCACCTGCTATTACTTCAGTTTGCTTCAATCATAATGGAAAAATCTTGGCAGCTTCTGCAACAGATGGGATGATTCACATGTTTGACATGTCTGCTGGTCTTCAGATCACTGGATGGCCTGCCCATGATTCCCCTGTCAGCTCTGTTCTTTTCGGGCCTGCTGAAACTAGTATATTTAGTTTGGGCTCAGATGGAAAGATATTTGAGTGGAGCCTGCACAATCAAGGCCAGATTCTTTGGTCAAGAGATTGCAGTAGGTTTTGCAGTCCAGAGAGCTTTAGCAAACGCATGCATGAGATATCATTGGATTCTGATGGCAAGAGGCTGTTGGTTACATCGGGTCTTGTCCGGGCTCCTATATATCAGGTACAAGGCCATGAAAGTGGGCTGAGGACACTTGCTCATAGTGCATCTATTACAAGTGTGGATTGGCACCCGACGCTACCAATGTACATTACTGGGTCTGCAGACAACTCTGTCCGGGTCACATCCATTGTATGAATCAATCTGTGAGTGTGACAGGCAGATTGCTCTCGAGGCCTTGTTGATTTCTCGATGCAACCACATACGCCATTCCATGAGGTGACCAGTGGTGCGCCAAATGATTATCCATTTTCCTAAATAGGCCTGGCCTCTGGGTTTCAAATCCCCAATACGTGCTTCTTTTCCTACCATATACCGACTCAGTTGTCATGTCCAGATTAGTGGCCTTTGGTTCAGGATACATTTTTGCGTTGAAGGTGTCCTGCGATGGTGAGCTTCTATAACCTTTTTGCTGTAGAACTGCATGAGTTATGCAATCTTTACAACAGGGTTTGGGAATTAAAATCGTAGCAGCAGGTTTCGTCCTAAAGCAAAACAGTTTTGTAATCCTTGTAACGGCAGCTGGTGATGAACAGTATCAGTGTGTGTGGTGTCAGCCATTTGTTTATTGCAACAACATTGTAGCCTAGCATTTGAACCAAACAAGTACAGGGCCCAAGTATTACTACATTTGTTGCATCGACATGAGCATTGTTTGTGT]

[+] EMBL AK111812             [TGGCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCATCCCGCGACCGGAGCTCCACCTGTGCCGGCGTCTGCTGCTTCCACCGCATCCTCGCTAGCCTGCCCCGCCGTGAAACTGGACAAGAATGGAGAACATGCAGTATGCTGAAGAACTAGTCAAGGAATTTCTTGTGTTCAGAGGCTTCACGAGTACTCTGCAATCGTACGAGTCGGAATTGTCTACCGAGATCGGGAGGAACTTTCAAGTAGACAAGATCCTAGATTTGGTTTTCTCGGTGTATATACCAAAGTACCAATTGGATAGGTTGCAAGGTCTGTTTACCTTTTTTAAGCAGTGCTTCACTTCACCTGCGGATGCGGAGCTTTTCTCGGCTCTCATTAAATTGGAGCTGTCGGTGTTACGGTATTATGTTGTCAATGCATTGAAATCTGGAAGACAAGACAAAGTAGTTGAATTCTTCGGTGCTAATGGCAATTATCTGCTGCAGAAGCGTGAAGACTGGCAAGCATGGTTTGGTGCGTATTCTTAGTTCCTTTTGCTATATTCCATCAAGTGTCAACCTCATTCTTATCTTCTTGTTCTTAATTGTGATACACAGCTATGCCATATATCACGAGCCCAAGCTTGGATCCACAATTCCGTGTATATTTCTCCAAAGAATGGTCGGACACTTTGATTCTTTCATTCCGAAATTTTTTGAGCGGGATATTTAATGGTCTTCATATCCTTGAACAACATGTTATTTGTTTTATTCTTCTATTCTTCCTCAAGTTGGTAGTAAACATGTTTGCTTTCTATAATATGCAAGAACTCCCTAAATGGGATACAACATAAGTGCATAACACCTTTATCCACATTCTAGTTGATCATCAAGTAAATTGTATTGTATGTTTGTTAATGTGATTGTTACCTATATTTGGGTTAACAAACATATTATGTTTTGCTCAACAATGTTTTCTCCTTAATTTTTCCACGAATTCCAGCTCTTCTCAAAATTAGCACTGAAAAGAATACCATTAAATGCCTAAAGAACGACATAAAGCAACTGAATAACAAATTATCAGAGCTACAAGCATTGTTAGAGATGAAGGAGACTGAAATATCTCAGTTGAGAAGGTAAATCTATGCTCTTTATACATTACACTGCAGCATAACTAATCTGTTTGCACATGCATGCGTAGCTTTTGTGGAGATTGGATGAAACTAGGAAAATTATGTTCACTAATTAATCTAACAGTACCTTCATTTCTTATTACGTTCAGTATCCAGTTAATGTAAAGCATGAAGTAAAATATGATTTCTAACCTCCACCCACATACATACACAGCCTCACACTCGGAAACTAGAAACTGCTGTGTTTCATTTGTTTTCATGCCCTCGCTTGCCTTACCAAGTTAGTTTCGCAGTGGCTGAACAGTTCAAACTCGATATTCAAGCGTCAAGCATTTAGATTCAGAGCACTTCAAACTCATTTCTTGGATTTCACATAAATGTCAACATTACGCTACCTTCTGCCCAAAGGAATTTATGTCTCAATTGATAAATACAGGAATAGTACTGGTGTTGATTTGGGCAACATGAATGTTCCCAACACTAGTGCAGCTGACTCTTCTCTTGAAGGACAAGATATGCCAGGAGTTTTCGAAGAATCCTCAGCTTCGAGAAGCGCTGCACAGGGTTTTGATTCACAGTCTTCGAGCTCAGTGAAATCTTCTACAAGAGATGAGAAATTGCACAAATCTTTTCAAATAAGCAATGCAGAGAACGAGCAGATTTTGGTGACAGAGGATGACTTTCCAGAAGTGAAAGTGGATTTTCAGGAAACATTTTTAGGCCATAACAGTTCAATTAGCTGCTGTCGATTTTCTGCATCTGGATCAAATGTTGCAAGTTCTTCCGTTGATGGTACAGTGAGATCTGACCGCTTGGCACAGCTAATGGTGGCATTAAAGCTTGGAATGCTGATGCAAAGAGAGTTGTTTGCGACCTCAGTACATCAAAAGACTTTCCCAGTGTGTTAGATTTGAAGTGTAGCCCTGTAGAACCTGTGTTTGTCTCTGCAGCTGCATCTAGACGGCCTGGATCAACTATATTTGACAGAACAGGATTTGCTTCCTTGACTGTATGGCATATGAAAACATGGAAACCTCTGACAGTTCTACCACTTGGGGAGGACCCACCTGCTATTACTTCAGTTTGCTTCAATCATAATGGAAAAATCTTGGCAGCTTCTGCAACAGATGGGATGATTCACATGTTTGACATGTCTGCTGGTCTTCAGATCACTGGATGGCCTGCCCATGATTCCCCTGTCAGCTCTGTTCTTTTCGGGCCTGCTGAAACTAGTATATTTAGTTTGGGCTCAGATGGAAAGATATTTGAGTGGAGCCTGCACAATCAAGGCCAGATTCTTTGGTCAAGAGATTGCAGTAGGTTTTGCAGTCCAGAGAGCTTTAGCAAACGCATGCATGAGATATCATTGGATTCTGATGGCAAGAGGCTGTTGGTTACATCGGGTCTTGTCCGGGCTCCTATATATCAGGTACAAGGCCATGAAAGTGGGCTGAGGACACTTGCTCATAGTGCATCTATTACAAGTGTGGATTGGCACCCGACGCTACCAATGTACATTACTGGGTCTGCAGACAACTCTGTCCGGGTCACATCCATTGTATGAATCAATCTGTGAGTGTGACAGGCAGATTGCTCTCGAGGCCTTGTTGATTTCTCGATGCAACCACATACGCCATTCCATGAGGTGACCAGTGGTGCGCCAAATGATTATCCATTTTCCTAAATAGGCCTGGCCTCTGGGTTTCAAATCCCCAATACGTGCTTCTTTTCCTACCATATACCGACTCAGTTGTCATGTCCAGATTAGTGGCCTTTGGTTCAGGATACATTTTTGCGTTGAAGGTGTCCTGCGATGGTGAGCTTCTATAACCTTTTTGCTGTAGAACTGCATGAGTTATGCAATCTTTACAACAGGGTTTGGGAATTAAAATCGTAGCAGCAGGTTTCGTCCTAAAGCAAAACAGTTTTGTAATCCTTGTAACGGCAGCTGGTGATGAACAGTATCAGTGTGTGTGGTGTCAGCCATTTGTTTATTGCAACAACATTGTAGCCTAGCATTTGAACCAAACAAGTACAGGGCCCAAGTATTACTACATTTGTTGCATCGACATGAGCATTGTTTGTGT]
[+] EMBL AU093627             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCCTACCATATACCGACTCAGTTGTCATGTCCAGATTAGTGGCCTTTGGTTCAGGATACATTTTTGCGTTGAAGGTGTCCTGCGATGGTGAGCTTCTATAACCTTTTTGCTGTAGAACTGCATGAGTTATGCAATCTTTACAACAGGGTTTGGGAATTAAAATCGTAGCAGCAGGTTTCGTCCTAAAGCAAAACAGTTTTGTAATCCTTGTAACGGCAGCTGGTGATGAACAGTATCAGTGTGTGTGGTGTCAGCCATTTGTTTATTGCAACAACATTGTAGCCTAGCATTTGAACCAAACAAGTACAGGGCCCAAGTATTACTACATTTGTTGCAa                     ]




>consensus_6037#0
TGGCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCATCCCGCGACCGGAG
CTCCACCTGTGCCGGCGTCTGCTGCTTCCACCGCATCCTCGCTAGCCTGCCCCGCCGTGA
AACTGGACAAGAATGGAGAACATGCAGTATGCTGAAGAACTAGTCAAGGAATTTCTTGTG
TTCAGAGGCTTCACGAGTACTCTGCAATCGTACGAGTCGGAATTGTCTACCGAGATCGGG
AGGAACTTTCAAGTAGACAAGATCCTAGATTTGGTTTTCTCGGTGTATATACCAAAGTAC
CAATTGGATAGGTTGCAAGGTCTGTTTACCTTTTTTAAGCAGTGCTTCACTTCACCTGCG
GATGCGGAGCTTTTCTCGGCTCTCATTAAATTGGAGCTGTCGGTGTTACGGTATTATGTT
GTCAATGCATTGAAATCTGGAAGACAAGACAAAGTAGTTGAATTCTTCGGTGCTAATGGC
AATTATCTGCTGCAGAAGCGTGAAGACTGGCAAGCATGGTTTGGTGCGTATTCTTAGTTC
CTTTTGCTATATTCCATCAAGTGTCAACCTCATTCTTATCTTCTTGTTCTTAATTGTGAT
ACACAGCTATGCCATATATCACGAGCCCAAGCTTGGATCCACAATTCCGTGTATATTTCT
CCAAAGAATGGTCGGACACTTTGATTCTTTCATTCCGAAATTTTTTGAGCGGGATATTTA
ATGGTCTTCATATCCTTGAACAACATGTTATTTGTTTTATTCTTCTATTCTTCCTCAAGT
TGGTAGTAAACATGTTTGCTTTCTATAATATGCAAGAACTCCCTAAATGGGATACAACAT
AAGTGCATAACACCTTTATCCACATTCTAGTTGATCATCAAGTAAATTGTATTGTATGTT
TGTTAATGTGATTGTTACCTATATTTGGGTTAACAAACATATTATGTTTTGCTCAACAAT
GTTTTCTCCTTAATTTTTCCACGAATTCCAGCTCTTCTCAAAATTAGCACTGAAAAGAAT
ACCATTAAATGCCTAAAGAACGACATAAAGCAACTGAATAACAAATTATCAGAGCTACAA
GCATTGTTAGAGATGAAGGAGACTGAAATATCTCAGTTGAGAAGGTAAATCTATGCTCTT
TATACATTACACTGCAGCATAACTAATCTGTTTGCACATGCATGCGTAGCTTTTGTGGAG
ATTGGATGAAACTAGGAAAATTATGTTCACTAATTAATCTAACAGTACCTTCATTTCTTA
TTACGTTCAGTATCCAGTTAATGTAAAGCATGAAGTAAAATATGATTTCTAACCTCCACC
CACATACATACACAGCCTCACACTCGGAAACTAGAAACTGCTGTGTTTCATTTGTTTTCA
TGCCCTCGCTTGCCTTACCAAGTTAGTTTCGCAGTGGCTGAACAGTTCAAACTCGATATT
CAAGCGTCAAGCATTTAGATTCAGAGCACTTCAAACTCATTTCTTGGATTTCACATAAAT
GTCAACATTACGCTACCTTCTGCCCAAAGGAATTTATGTCTCAATTGATAAATACAGGAA
TAGTACTGGTGTTGATTTGGGCAACATGAATGTTCCCAACACTAGTGCAGCTGACTCTTC
TCTTGAAGGACAAGATATGCCAGGAGTTTTCGAAGAATCCTCAGCTTCGAGAAGCGCTGC
ACAGGGTTTTGATTCACAGTCTTCGAGCTCAGTGAAATCTTCTACAAGAGATGAGAAATT
GCACAAATCTTTTCAAATAAGCAATGCAGAGAACGAGCAGATTTTGGTGACAGAGGATGA
CTTTCCAGAAGTGAAAGTGGATTTTCAGGAAACATTTTTAGGCCATAACAGTTCAATTAG
CTGCTGTCGATTTTCTGCATCTGGATCAAATGTTGCAAGTTCTTCCGTTGATGGTACAGT
GAGATCTGACCGCTTGGCACAGCTAATGGTGGCATTAAAGCTTGGAATGCTGATGCAAAG
AGAGTTGTTTGCGACCTCAGTACATCAAAAGACTTTCCCAGTGTGTTAGATTTGAAGTGT
AGCCCTGTAGAACCTGTGTTTGTCTCTGCAGCTGCATCTAGACGGCCTGGATCAACTATA
TTTGACAGAACAGGATTTGCTTCCTTGACTGTATGGCATATGAAAACATGGAAACCTCTG
ACAGTTCTACCACTTGGGGAGGACCCACCTGCTATTACTTCAGTTTGCTTCAATCATAAT
GGAAAAATCTTGGCAGCTTCTGCAACAGATGGGATGATTCACATGTTTGACATGTCTGCT
GGTCTTCAGATCACTGGATGGCCTGCCCATGATTCCCCTGTCAGCTCTGTTCTTTTCGGG
CCTGCTGAAACTAGTATATTTAGTTTGGGCTCAGATGGAAAGATATTTGAGTGGAGCCTG
CACAATCAAGGCCAGATTCTTTGGTCAAGAGATTGCAGTAGGTTTTGCAGTCCAGAGAGC
TTTAGCAAACGCATGCATGAGATATCATTGGATTCTGATGGCAAGAGGCTGTTGGTTACA
TCGGGTCTTGTCCGGGCTCCTATATATCAGGTACAAGGCCATGAAAGTGGGCTGAGGACA
CTTGCTCATAGTGCATCTATTACAAGTGTGGATTGGCACCCGACGCTACCAATGTACATT
ACTGGGTCTGCAGACAACTCTGTCCGGGTCACATCCATTGTATGAATCAATCTGTGAGTG
TGACAGGCAGATTGCTCTCGAGGCCTTGTTGATTTCTCGATGCAACCACATACGCCATTC
CATGAGGTGACCAGTGGTGCGCCAAATGATTATCCATTTTCCTAAATAGGCCTGGCCTCT
GGGTTTCAAATCCCCAATACGTGCTTCTTTTCCTACCATATACCGACTCAGTTGTCATGT
CCAGATTAGTGGCCTTTGGTTCAGGATACATTTTTGCGTTGAAGGTGTCCTGCGATGGTG
AGCTTCTATAACCTTTTTGCTGTAGAACTGCATGAGTTATGCAATCTTTACAACAGGGTT
TGGGAATTAAAATCGTAGCAGCAGGTTTCGTCCTAAAGCAAAACAGTTTTGTAATCCTTG
TAACGGCAGCTGGTGATGAACAGTATCAGTGTGTGTGGTGTCAGCCATTTGTTTATTGCA
ACAACATTGTAGCCTAGCATTTGAACCAAACAAGTACAGGGCCCAAGTATTACTACATTT
GTTGCATCGACATGAGCATTGTTTGTGT

consensusID : consensus_6037#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 601
fasta sequence 
                              [GCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCATCCCGCGACCGGAGCTCCACCTGTGCCGGCGTCTGCTGCTTCCACCGCATCCTCGCTAGCCTGCCCCGCCGTGAAACTGGACAAGAATGGAGAACATGCAGTATGCTGAAGAACTAGTCAAGGAATTTCTTGTGTTCAGAGGCTTCACGAGTACTCTGCAATCGTACGAGTCGGAATTGTCTACCGAGATCGGGAGGAACTTTCAAGTAGACAAGATCCTAGATTTGGTTTTCTCGGTGTATATACCAAAGTACCAATTGGATAGGTTGCAAGGTCTGTTTACCTTTTTTAAGCAGTGCTTCACTTCACCTGCGGATGCGGAGCTTTTCTCGGCTCTCATTAAATTGGAGCTGTCGGTGTTACGGTATTATGTTGTCAATGCATTGAAATCTGGAAGACAAGACAAAGTAGTTGAATTCTTCGGTGCTAATGGCAATTATCTGCTGCAGAAGCGTGAAGACTGGCAAGCATGGTTTGCTATGCCATATATCACGAGCCCAAGCTTGGATCCACAATTCCGTGTATATTTCTCCAAAGAATGGTCGGACACTTTGATT]

[+] EMBL CB637471             [GCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCATCCCGCGACCGGAGCTCCACCTGTGCCGGCGTCTGCTGCTTCCACCGCATCCTCGCTAGCCTGCCCCGCCGTGAAACTGGACAAGAATGGAGAACATGCAGTATGCTGAAGAACTAGTCAAGGAATTTCTTGTGTTCAGAGGCTTCACGAGTACTCTGCAATCGTACGAGTCGGAATTGTCTACCGAGATCGGGAGGAACTTTCAAGTAGACAAGATCCTAGATTTGGTTTTCTCGGTGTATATACCAAAGTACCAATTGGATAGGTTGCAAGGTCTGTTTACCTTTTTTAAGCAGTGCTTCACTTCACCTGCGGATGCGGAGCTTTTCTCGGCTCTCATTAAATTGGAGCTGTCGGTGTTACGGTATTATGTTGTCAATGCATTGAAATCTGGAAGACAAGACAAAGTAGTTGAATTCTTCGGTGCTAATGGCAATTATCTGCTGCAGAAGCGTGAAGACTGGCAAGCATGGTTTGCTATGCCATATATCACGAGCCCAAGCTTGGATCCACAATTCCGTGTATATTTCTCCAAAGAATGGTCGGACACTTTGATT]




>consensus_6037#1
GCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCATCCCGCGACCGGAGCT
CCACCTGTGCCGGCGTCTGCTGCTTCCACCGCATCCTCGCTAGCCTGCCCCGCCGTGAAA
CTGGACAAGAATGGAGAACATGCAGTATGCTGAAGAACTAGTCAAGGAATTTCTTGTGTT
CAGAGGCTTCACGAGTACTCTGCAATCGTACGAGTCGGAATTGTCTACCGAGATCGGGAG
GAACTTTCAAGTAGACAAGATCCTAGATTTGGTTTTCTCGGTGTATATACCAAAGTACCA
ATTGGATAGGTTGCAAGGTCTGTTTACCTTTTTTAAGCAGTGCTTCACTTCACCTGCGGA
TGCGGAGCTTTTCTCGGCTCTCATTAAATTGGAGCTGTCGGTGTTACGGTATTATGTTGT
CAATGCATTGAAATCTGGAAGACAAGACAAAGTAGTTGAATTCTTCGGTGCTAATGGCAA
TTATCTGCTGCAGAAGCGTGAAGACTGGCAAGCATGGTTTGCTATGCCATATATCACGAG
CCCAAGCTTGGATCCACAATTCCGTGTATATTTCTCCAAAGAATGGTCGGACACTTTGAT
T

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6037#0      TGGCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCATCCCGCGACCGGAG 60
consensus_6037#1      --GCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCATCCCGCGACCGGAG 58
                        **********************************************************

consensus_6037#0      CTCCACCTGTGCCGGCGTCTGCTGCTTCCACCGCATCCTCGCTAGCCTGCCCCGCCGTGA 120
consensus_6037#1      CTCCACCTGTGCCGGCGTCTGCTGCTTCCACCGCATCCTCGCTAGCCTGCCCCGCCGTGA 118
                      ************************************************************

consensus_6037#0      AACTGGACAAGAATGGAGAACATGCAGTATGCTGAAGAACTAGTCAAGGAATTTCTTGTG 180
consensus_6037#1      AACTGGACAAGAATGGAGAACATGCAGTATGCTGAAGAACTAGTCAAGGAATTTCTTGTG 178
                      ************************************************************

consensus_6037#0      TTCAGAGGCTTCACGAGTACTCTGCAATCGTACGAGTCGGAATTGTCTACCGAGATCGGG 240
consensus_6037#1      TTCAGAGGCTTCACGAGTACTCTGCAATCGTACGAGTCGGAATTGTCTACCGAGATCGGG 238
                      ************************************************************

consensus_6037#0      AGGAACTTTCAAGTAGACAAGATCCTAGATTTGGTTTTCTCGGTGTATATACCAAAGTAC 300
consensus_6037#1      AGGAACTTTCAAGTAGACAAGATCCTAGATTTGGTTTTCTCGGTGTATATACCAAAGTAC 298
                      ************************************************************

consensus_6037#0      CAATTGGATAGGTTGCAAGGTCTGTTTACCTTTTTTAAGCAGTGCTTCACTTCACCTGCG 360
consensus_6037#1      CAATTGGATAGGTTGCAAGGTCTGTTTACCTTTTTTAAGCAGTGCTTCACTTCACCTGCG 358
                      ************************************************************

consensus_6037#0      GATGCGGAGCTTTTCTCGGCTCTCATTAAATTGGAGCTGTCGGTGTTACGGTATTATGTT 420
consensus_6037#1      GATGCGGAGCTTTTCTCGGCTCTCATTAAATTGGAGCTGTCGGTGTTACGGTATTATGTT 418
                      ************************************************************

consensus_6037#0      GTCAATGCATTGAAATCTGGAAGACAAGACAAAGTAGTTGAATTCTTCGGTGCTAATGGC 480
consensus_6037#1      GTCAATGCATTGAAATCTGGAAGACAAGACAAAGTAGTTGAATTCTTCGGTGCTAATGGC 478
                      ************************************************************

consensus_6037#0      AATTATCTGCTGCAGAAGCGTGAAGACTGGCAAGCATGGTTTGGTGCGTATTCTTAGTTC 540
consensus_6037#1      AATTATCTGCTGCAGAAGCGTGAAGACTGGCAAGCATGGTTTG----------------- 521
                      *******************************************                 

consensus_6037#0      CTTTTGCTATATTCCATCAAGTGTCAACCTCATTCTTATCTTCTTGTTCTTAATTGTGAT 600
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      ACACAGCTATGCCATATATCACGAGCCCAAGCTTGGATCCACAATTCCGTGTATATTTCT 660
consensus_6037#1      ------CTATGCCATATATCACGAGCCCAAGCTTGGATCCACAATTCCGTGTATATTTCT 575
                            ******************************************************

consensus_6037#0      CCAAAGAATGGTCGGACACTTTGATTCTTTCATTCCGAAATTTTTTGAGCGGGATATTTA 720
consensus_6037#1      CCAAAGAATGGTCGGACACTTTGATT---------------------------------- 601
                      **************************                                  

consensus_6037#0      ATGGTCTTCATATCCTTGAACAACATGTTATTTGTTTTATTCTTCTATTCTTCCTCAAGT 780
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TGGTAGTAAACATGTTTGCTTTCTATAATATGCAAGAACTCCCTAAATGGGATACAACAT 840
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      AAGTGCATAACACCTTTATCCACATTCTAGTTGATCATCAAGTAAATTGTATTGTATGTT 900
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TGTTAATGTGATTGTTACCTATATTTGGGTTAACAAACATATTATGTTTTGCTCAACAAT 960
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GTTTTCTCCTTAATTTTTCCACGAATTCCAGCTCTTCTCAAAATTAGCACTGAAAAGAAT 1020
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      ACCATTAAATGCCTAAAGAACGACATAAAGCAACTGAATAACAAATTATCAGAGCTACAA 1080
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GCATTGTTAGAGATGAAGGAGACTGAAATATCTCAGTTGAGAAGGTAAATCTATGCTCTT 1140
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TATACATTACACTGCAGCATAACTAATCTGTTTGCACATGCATGCGTAGCTTTTGTGGAG 1200
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      ATTGGATGAAACTAGGAAAATTATGTTCACTAATTAATCTAACAGTACCTTCATTTCTTA 1260
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TTACGTTCAGTATCCAGTTAATGTAAAGCATGAAGTAAAATATGATTTCTAACCTCCACC 1320
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CACATACATACACAGCCTCACACTCGGAAACTAGAAACTGCTGTGTTTCATTTGTTTTCA 1380
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TGCCCTCGCTTGCCTTACCAAGTTAGTTTCGCAGTGGCTGAACAGTTCAAACTCGATATT 1440
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CAAGCGTCAAGCATTTAGATTCAGAGCACTTCAAACTCATTTCTTGGATTTCACATAAAT 1500
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GTCAACATTACGCTACCTTCTGCCCAAAGGAATTTATGTCTCAATTGATAAATACAGGAA 1560
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TAGTACTGGTGTTGATTTGGGCAACATGAATGTTCCCAACACTAGTGCAGCTGACTCTTC 1620
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TCTTGAAGGACAAGATATGCCAGGAGTTTTCGAAGAATCCTCAGCTTCGAGAAGCGCTGC 1680
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      ACAGGGTTTTGATTCACAGTCTTCGAGCTCAGTGAAATCTTCTACAAGAGATGAGAAATT 1740
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GCACAAATCTTTTCAAATAAGCAATGCAGAGAACGAGCAGATTTTGGTGACAGAGGATGA 1800
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CTTTCCAGAAGTGAAAGTGGATTTTCAGGAAACATTTTTAGGCCATAACAGTTCAATTAG 1860
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CTGCTGTCGATTTTCTGCATCTGGATCAAATGTTGCAAGTTCTTCCGTTGATGGTACAGT 1920
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GAGATCTGACCGCTTGGCACAGCTAATGGTGGCATTAAAGCTTGGAATGCTGATGCAAAG 1980
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      AGAGTTGTTTGCGACCTCAGTACATCAAAAGACTTTCCCAGTGTGTTAGATTTGAAGTGT 2040
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      AGCCCTGTAGAACCTGTGTTTGTCTCTGCAGCTGCATCTAGACGGCCTGGATCAACTATA 2100
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TTTGACAGAACAGGATTTGCTTCCTTGACTGTATGGCATATGAAAACATGGAAACCTCTG 2160
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      ACAGTTCTACCACTTGGGGAGGACCCACCTGCTATTACTTCAGTTTGCTTCAATCATAAT 2220
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GGAAAAATCTTGGCAGCTTCTGCAACAGATGGGATGATTCACATGTTTGACATGTCTGCT 2280
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GGTCTTCAGATCACTGGATGGCCTGCCCATGATTCCCCTGTCAGCTCTGTTCTTTTCGGG 2340
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CCTGCTGAAACTAGTATATTTAGTTTGGGCTCAGATGGAAAGATATTTGAGTGGAGCCTG 2400
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CACAATCAAGGCCAGATTCTTTGGTCAAGAGATTGCAGTAGGTTTTGCAGTCCAGAGAGC 2460
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TTTAGCAAACGCATGCATGAGATATCATTGGATTCTGATGGCAAGAGGCTGTTGGTTACA 2520
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TCGGGTCTTGTCCGGGCTCCTATATATCAGGTACAAGGCCATGAAAGTGGGCTGAGGACA 2580
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CTTGCTCATAGTGCATCTATTACAAGTGTGGATTGGCACCCGACGCTACCAATGTACATT 2640
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      ACTGGGTCTGCAGACAACTCTGTCCGGGTCACATCCATTGTATGAATCAATCTGTGAGTG 2700
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TGACAGGCAGATTGCTCTCGAGGCCTTGTTGATTTCTCGATGCAACCACATACGCCATTC 2760
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CATGAGGTGACCAGTGGTGCGCCAAATGATTATCCATTTTCCTAAATAGGCCTGGCCTCT 2820
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GGGTTTCAAATCCCCAATACGTGCTTCTTTTCCTACCATATACCGACTCAGTTGTCATGT 2880
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      CCAGATTAGTGGCCTTTGGTTCAGGATACATTTTTGCGTTGAAGGTGTCCTGCGATGGTG 2940
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      AGCTTCTATAACCTTTTTGCTGTAGAACTGCATGAGTTATGCAATCTTTACAACAGGGTT 3000
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TGGGAATTAAAATCGTAGCAGCAGGTTTCGTCCTAAAGCAAAACAGTTTTGTAATCCTTG 3060
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      TAACGGCAGCTGGTGATGAACAGTATCAGTGTGTGTGGTGTCAGCCATTTGTTTATTGCA 3120
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      ACAACATTGTAGCCTAGCATTTGAACCAAACAAGTACAGGGCCCAAGTATTACTACATTT 3180
consensus_6037#1      ------------------------------------------------------------
                                                                                  

consensus_6037#0      GTTGCATCGACATGAGCATTGTTTGTGT 3208
consensus_6037#1      ----------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)