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Oryza sativa
cluster # 6042 cluster # 6042       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6042#0 length = 1849 sequences # 3  

consensusID : consensus_6042#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1849
fasta sequence
                              [AACCTGCTCACCGGCGAGCTCCCGGACGTGATCGGCGGCGACAAGATCGGCATGCTGCTGCTGGGGAACAATGGGATCGGTGGCCGCATCCCTCCAGCCATCGGCAACCTCCCGGCGCTGCAGACGCTGTCGCTGGAGTCCAACAACTTCTCCGGAGCGCTGCCACCGGAGATCGGCAATCTCAAGAACCTGTCCAGGCTCAACGTCAGCGGCAACGCGCTCACCGGCGCCATTCCAGACGAGCTCATCCGCTGCGCCTCCCTCGCCGCCGTCGACCTCAGCCGTAACGGCTTCTCCGGCGAGATACCGGAGAGCATCACGTCGCTCAAGATACTGTGCACGCTGAACGTGTCCAGGAACAGGCTCACCGGCGAGCTCCCGCCGGAGATGTCCAACATGACGAGCCTCACGACGCTCGACGTGTCGTACAACAGCCTCTCGGGCCCCGTGCCGATGCAGGGGCAGTTCTTGGTGTTCAACGAGAGCTCGTTCGTCGGCAACCCGGGGCTGTGCGGCGGCCCCGTGGCCGACGCGTGCCCTCCGTCCATGGCCGGCGGCGGCGGCGGCGCGGGGTCCCAGCTGCGGCTGCGGTGGGACTCGAAGAAGATGCTGGTGGCGCTGGTGGCGGCGTTCGCGGCGGTGGCGGTGGCGTTCCTGGGCGCGAGGAAGGGGTGCTCGGCGTGGCGGTCGGCGGCGCGGCGGCGGTCGGGGGCGTGGAAGATGACGGCGTTCCAGAAGCTGGAGTTCTCGGCGGAGGACGTGGTGGAGTGCGTGAAGGAGGACAACATCATCGGGAAGGGCGGCGCGGGGATCGTGTACCACGGCGTGACGCGCGGGGCGGAGCTGGCGATCAAGCGGTTGGTGGGGCGCGGCGGCGGCGAGCACGACCGGGGGTTCTCGGCGGAGGTGACGACGCTGGGGAGGATCAGGCACCGGAACATCGTGAGGCTGCTGGGGTTCGTGTCGAACAGGGAGACGAACCTGCTGCTGTACGAGTACATGCCGAATGGGTCGCTGGGGGAGATGCTCCATGGCGGGAAGGGGGGGCACCTCGGGTGGGAGGCGAGGGCGCGGGTGGCGGCGGAGGCGGCGTGCGGCCTCTGCTACCTCCACCATGACTGCGCCCCGAGGATCATCCACCGCGACGTCAAGTCCAACAACATCCTCCTCGACTCCGCCTTCGAGGCGCACGTCGCCGACTTCGGCCTCGCCAAGTTCCTCGGCGGCGCCACCTCCGAGTGCATGTCCGCCATTGCTGGCTCCTACGGCTACATCGCGCCAGAGTACGCATACACGCTGCGAGTGGACGAGAAGAGCGACGTGTATAGCTTCGGTGTGGTGCTATTGGAGCTCATCACCGGACGCCGCCCCGTGGGCGGGTTCGGTGACGGCGTGGACATCGTGCA-CTGGGTCCGCAAGGTGACCGCCGAGCTGCCGGACAACTCCGACACGGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTGGCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCCCGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAATAGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAATGTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGGTTGACGTGTACAATAACAGGCGGATTACTACTGCTTTTCTGCTATGCGTAATAGCTAAATGAATATGTGCATATTAGTAAAGTTGAAGTTGAAATGTCTAAAAAAAAAA]

[+] EMBL AK111824             [AACCTGCTCACCGGCGAGCTCCCGGACGTGATCGGCGGCGACAAGATCGGCATGCTGCTGCTGGGGAACAATGGGATCGGTGGCCGCATCCCTCCAGCCATCGGCAACCTCCCGGCGCTGCAGACGCTGTCGCTGGAGTCCAACAACTTCTCCGGAGCGCTGCCACCGGAGATCGGCAATCTCAAGAACCTGTCCAGGCTCAACGTCAGCGGCAACGCGCTCACCGGCGCCATTCCAGACGAGCTCATCCGCTGCGCCTCCCTCGCCGCCGTCGACCTCAGCCGTAACGGCTTCTCCGGCGAGATACCGGAGAGCATCACGTCGCTCAAGATACTGTGCACGCTGAACGTGTCCAGGAACAGGCTCACCGGCGAGCTCCCGCCGGAGATGTCCAACATGACGAGCCTCACGACGCTCGACGTGTCGTACAACAGCCTCTCGGGCCCCGTGCCGATGCAGGGGCAGTTCTTGGTGTTCAACGAGAGCTCGTTCGTCGGCAACCCGGGGCTGTGCGGCGGCCCCGTGGCCGACGCGTGCCCTCCGTCCATGGCCGGCGGCGGCGGCGGCGCGGGGTCCCAGCTGCGGCTGCGGTGGGACTCGAAGAAGATGCTGGTGGCGCTGGTGGCGGCGTTCGCGGCGGTGGCGGTGGCGTTCCTGGGCGCGAGGAAGGGGTGCTCGGCGTGGCGGTCGGCGGCGCGGCGGCGGTCGGGGGCGTGGAAGATGACGGCGTTCCAGAAGCTGGAGTTCTCGGCGGAGGACGTGGTGGAGTGCGTGAAGGAGGACAACATCATCGGGAAGGGCGGCGCGGGGATCGTGTACCACGGCGTGACGCGCGGGGCGGAGCTGGCGATCAAGCGGTTGGTGGGGCGCGGCGGCGGCGAGCACGACCGGGGGTTCTCGGCGGAGGTGACGACGCTGGGGAGGATCAGGCACCGGAACATCGTGAGGCTGCTGGGGTTCGTGTCGAACAGGGAGACGAACCTGCTGCTGTACGAGTACATGCCGAATGGGTCGCTGGGGGAGATGCTCCATGGCGGGAAGGGGGGGCACCTCGGGTGGGAGGCGAGGGCGCGGGTGGCGGCGGAGGCGGCGTGCGGCCTCTGCTACCTCCACCATGACTGCGCCCCGAGGATCATCCACCGCGACGTCAAGTCCAACAACATCCTCCTCGACTCCGCCTTCGAGGCGCACGTCGCCGACTTCGGCCTCGCCAAGTTCCTCGGCGGCGCCACCTCCGAGTGCATGTCCGCCATTGCTGGCTCCTACGGCTACATCGCGCCAGAGTACGCATACACGCTGCGAGTGGACGAGAAGAGCGACGTGTATAGCTTCGGTGTGGTGCTATTGGAGCTCATCACCGGACGCCGCCCCGTGGGCGGGTTCGGTGACGGCGTGGACATCGTGCA CTGGGTCCGCAAGGTGACCGCCGAGCTGCCGGACAACTCCGACACGGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTGGCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCCCGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAATAGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAATGTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGGTTGACGTGTACAATAACAGGCGGATTACCACTGCTTTTCTGCTATGCGTAATAGCTAAATGAATATGT                                         ]
[+] EMBL BI809338             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATCGTGCACCTGGGTCCGCAA GTGACCGCCGA CTGCCGGACAACTCCGACACGGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTGGCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCCCGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAATAGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAATGTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGGTTGACGTGTACAATAACAGGCGGATTACTACTGCTTTTCTGCTATGCGTAATAGCTAAATGAATATGTGCATATTAGTAAAGTTGAAGTTGAAATGTCTAAAAAAAAAA]
[+] EMBL CB684619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGACACTGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTGGCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCCCGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAATAGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAATGTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGGTTGACGTGTACAATAACAGGCGGATTACTACTGCTTTTCTGCTATGCGTAATAGCTAAATGAATATGTGCATATTAGTAAAGTTGAAGTT                   ]


>consensus_6042#0 AACCTGCTCACCGGCGAGCTCCCGGACGTGATCGGCGGCGACAAGATCGGCATGCTGCTG CTGGGGAACAATGGGATCGGTGGCCGCATCCCTCCAGCCATCGGCAACCTCCCGGCGCTG CAGACGCTGTCGCTGGAGTCCAACAACTTCTCCGGAGCGCTGCCACCGGAGATCGGCAAT CTCAAGAACCTGTCCAGGCTCAACGTCAGCGGCAACGCGCTCACCGGCGCCATTCCAGAC GAGCTCATCCGCTGCGCCTCCCTCGCCGCCGTCGACCTCAGCCGTAACGGCTTCTCCGGC GAGATACCGGAGAGCATCACGTCGCTCAAGATACTGTGCACGCTGAACGTGTCCAGGAAC AGGCTCACCGGCGAGCTCCCGCCGGAGATGTCCAACATGACGAGCCTCACGACGCTCGAC GTGTCGTACAACAGCCTCTCGGGCCCCGTGCCGATGCAGGGGCAGTTCTTGGTGTTCAAC GAGAGCTCGTTCGTCGGCAACCCGGGGCTGTGCGGCGGCCCCGTGGCCGACGCGTGCCCT CCGTCCATGGCCGGCGGCGGCGGCGGCGCGGGGTCCCAGCTGCGGCTGCGGTGGGACTCG AAGAAGATGCTGGTGGCGCTGGTGGCGGCGTTCGCGGCGGTGGCGGTGGCGTTCCTGGGC GCGAGGAAGGGGTGCTCGGCGTGGCGGTCGGCGGCGCGGCGGCGGTCGGGGGCGTGGAAG ATGACGGCGTTCCAGAAGCTGGAGTTCTCGGCGGAGGACGTGGTGGAGTGCGTGAAGGAG GACAACATCATCGGGAAGGGCGGCGCGGGGATCGTGTACCACGGCGTGACGCGCGGGGCG GAGCTGGCGATCAAGCGGTTGGTGGGGCGCGGCGGCGGCGAGCACGACCGGGGGTTCTCG GCGGAGGTGACGACGCTGGGGAGGATCAGGCACCGGAACATCGTGAGGCTGCTGGGGTTC GTGTCGAACAGGGAGACGAACCTGCTGCTGTACGAGTACATGCCGAATGGGTCGCTGGGG GAGATGCTCCATGGCGGGAAGGGGGGGCACCTCGGGTGGGAGGCGAGGGCGCGGGTGGCG GCGGAGGCGGCGTGCGGCCTCTGCTACCTCCACCATGACTGCGCCCCGAGGATCATCCAC CGCGACGTCAAGTCCAACAACATCCTCCTCGACTCCGCCTTCGAGGCGCACGTCGCCGAC TTCGGCCTCGCCAAGTTCCTCGGCGGCGCCACCTCCGAGTGCATGTCCGCCATTGCTGGC TCCTACGGCTACATCGCGCCAGAGTACGCATACACGCTGCGAGTGGACGAGAAGAGCGAC GTGTATAGCTTCGGTGTGGTGCTATTGGAGCTCATCACCGGACGCCGCCCCGTGGGCGGG TTCGGTGACGGCGTGGACATCGTGCACTGGGTCCGCAAGGTGACCGCCGAGCTGCCGGAC AACTCCGACACGGCGGCCGTCCTCGCCGTGGCCGACCGCCGCCTGACGCCGGAGCCGGTG GCGCTGATGGTGAACCTGTACAAGGTGGCCATGGCGTGCGTGGAGGAGGCGAGCACGGCC CGGCCCACCATGCGCGAGGTCGTCCACATGCTCTCCAACCCAAACTCGGCCCAGCCCAAT AGTGGTGACCTCCTCGTCACCTTCTGAACCCCAAACTTAACGGTATTGTTTGCTGTTAAT GTGTGCGCTTAATTAGCGGCTAATTAATTTTGGCTTAGCTGGTACTTTTGCCGCGTGTGG TTGACGTGTACAATAACAGGCGGATTACTACTGCTTTTCTGCTATGCGTAATAGCTAAAT GAATATGTGCATATTAGTAAAGTTGAAGTTGAAATGTCTAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)