cluster # 6049

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Oryza sativa
cluster # 6049 cluster # 6049 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6049#0 length = 1825 sequences # 3
consensusID : consensus_6049#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1825
fasta sequence
                              [TAGTGTAGTGCGCGCTGTACTGTTCCCACGTCGCGTCGAGGCATCGGTTCGAGCGAGCGCGCGCGCGACGCGGGCGAGGCTCCGGCTCGATTCCGTCGCCACCCTGTGACAGCAGCAGCCACCGCCCACCGCCGCCGCCGCTTTCTGGAGGCTTCCCGTTGGCTCGTGGTTGCGGGGGGACTCGCGGAGTCGCGGTTGCGAGTTGGCTGCCTGCTACTCTGCTAGTGTGCTAAGCCTGCCTTTTAGTTAGTCTGGGAGCACGCTACTGCTACTTTCCCCAATCCAATCCAATCCAATCCAATCCTCGCCGGCGTTGGTTCGCTCGATCGGCGCGGCGCGGATGGAGACGCTCAGGAAGCAGGCCAGCAAGCTCAGGGAGCACGTCGCCAAGCAGCAGCAGGCTGTTCGGAAGCAGTTCAGTGCACGCTATAACCAGGATCCTTCTCTTGTCGATGAGGCGGAACTTGAGTGCCACCAGAATCTTCAGAGGCTATACAACAGTACAAGAGCTGCTAAACATTTCCAACGAAGTATTGTACGAGGTGTCGAGGGTTTCATTGCTGTCAGCACCAAACAGATGGAGATTGTGAAAAAGCTAGCTGAGGATTGTTGCAGATATGGAAACGACAATCAAAATTTTGGTTTTATTCTTGCAAGGGCTTCAGTTGAGTTTGGTAATTCCCATAGCCAAATGGAGAAAGAGCGGGAGAATCTTCTTAAATTTCTTGGAGAGCAGGTTTTTGAGCCTCTTCGAGAAATGATAATGAGTGCTCCTCTTGAAGATGCCCGCCTGTTAACTTACCGTTATCAACGGATCAGACAAGATATGGAATCTCAGATAGCTGATGTGATGAGAAAGCAACTGAAGTCCAAGGAGAGTAGCGGTAATGCAGATAATTCTGTGAAACTGCAACATGCAGAATCAAAATTATCTGAGCTCCGAACTACATTATCAGCATTAGGAAGAGAGGCAACTGCAGCTATGGAGGCTGTGGAGGTTCAGCAACAACAGGTTACCTTTGACCGTCTCCTTGCAATGGTTGATGCTGAGAGAGCTTATCATCAGAATGCTGCTGATATTCTGAACAAACTTCACGACGAGATGGTCCAAGCAAAACACCATGATGAGCCGGAAAACCATTATGATGAGACATCATCAGATCCTAAAACAGCTGCAACACATGAGCATTCACGTAGCACATCCGAAGATCACATATTTACTAATACTAGTGAACCTACAAGGACTGAAACCAGTGAACCTACAAGGACTGAAACTAGTGAACCTACAAGGAATGGTCAGGAAGTGCATTATGTTGGAGAGGTAATCCATCCATTCGATGCTCAGGCTGATGGCGAGCTCAGTATTTCCGTGGGAGATTATGTTGTGGTCCGGCAGGTGGCTCCCAATGGGTGGTCTGAAGGGGAATGCAAAGGAAAAGCTGGCTGGTTCCCATCTGCCTATGTGGAGCAGAGGGACAAAGCCCCGGCAAGTAAGGTGATAGAGCCTGGATTGCTGACTACTTAATCTCTCTCATACTAATAGTTGCTTTCATCGCCCTGTTTCCCCTGTACATGGGGTTTTTCTTGAGTGAATAGCATTTTGTAGAACTTCTACCTTTCTGTGCATATTCATGTGCTTCTAGGCTTGCTGTTACCCAATAATTGTATGTAAAATTTATTGTTTTGCCTTTAGCATCTCGTTTTCTCTTTCTTTCACAATGTATAGAGCTATTGGTCCTGGGATGCTGTAACCTTCCCTTTCTTTTGTGGAAA-GCGTGCTTCCTGCCAAAATTGTGAGATGGATTTCAGAACAGTCTCACTGGCC]

[+] EMBL AK072831             [TAGTGTAGTGCGCGCTGTACTGTTCCCACGTCGCGTCGAGGCATCGGTTCGAGCGAGCGCGCGCGCGACGCGGGCGAGGCTCCGGCTCGATTCCGTCGCCACCCTGTGACAGCAGCAGCCACCGCCCACCGCCGCCGCCGCTTTCTGGAGGCTTCCCGTTGGCTCGTGGTTGCGGGGGGACTCGCGGAGTCGCGGTTGCGAGTTGGCTGCCTGCTACTCTGCTAGTGTGCTAAGCCTGCCTTTTAGTTAGTCTGGGAGCACGCTACTGCTACTTTCCCCAATCCAATCCAATCCAATCCAATCCTCGCCGGCGTTGGTTCGCTCGATCGGCGCGGCGCGGATGGAGACGCTCAGGAAGCAGGCCAGCAAGCTCAGGGAGCACGTCGCCAAGCAGCAGCAGGCTGTTCGGAAGCAGTTCAGTGCACGCTATAACCAGGATCCTTCTCTTGTCGATGAGGCGGAACTTGAGTGCCACCAGAATCTTCAGAGGCTATACAACAGTACAAGAGCTGCTAAACATTTCCAACGAAGTATTGTACGAGGTGTCGAGGGTTTCATTGCTGTCAGCACCAAACAGATGGAGATTGTGAAAAAGCTAGCTGAGGATTGTTGCAGATATGGAAACGACAATCAAAATTTTGGTTTTATTCTTGCAAGGGCTTCAGTTGAGTTTGGTAATTCCCATAGCCAAATGGAGAAAGAGCGGGAGAATCTTCTTAAATTTCTTGGAGAGCAGGTTTTTGAGCCTCTTCGAGAAATGATAATGAGTGCTCCTCTTGAAGATGCCCGCCTGTTAACTTACCGTTATCAACGGATCAGACAAGATATGGAATCTCAGATAGCTGATGTGATGAGAAAGCAACTGAAGTCCAAGGAGAGTAGCGGTAATGCAGATAATTCTGTGAAACTGCAACATGCAGAATCAAAATTATCTGAGCTCCGAACTACATTATCAGCATTAGGAAGAGAGGCAACTGCAGCTATGGAGGCTGTGGAGGTTCAGCAACAACAGGTTACCTTTGACCGTCTCCTTGCAATGGTTGATGCTGAGAGAGCTTATCATCAGAATGCTGCTGATATTCTGAACAAACTTCACGACGAGATGGTCCAAGCAAAACACCATGATGAGCCGGAAAACCATTATGATGAGACATCATCAGATCCTAAAACAGCTGCAACACATGAGCATTCACGTAGCACATCCGAAGATCACATATTTACTAATACTAGTGAACCTACAAGGACTGAAACCAGTGAACCTACAAGGACTGAAACTAGTGAACCTACAAGGAATGGTCAGGAAGTGCATTATGTTGGAGAGGTAATCCATCCATTCGATGCTCAGGCTGATGGCGAGCTCAGTATTTCCGTGGGAGATTATGTTGTGGTCCGGCAGGTGGCTCCCAATGGGTGGTCTGAAGGGGAATGCAAAGGAAAAGCTGGCTGGTTCCCATCTGCCTATGTGGAGCAGAGGGACAAAGCCCCGGCAAGTAAGGTGATAGAGCCTGGATTGCTGACTACTTAATCTCTCTCATACTAATAGTTGCTTTCATCGCCCTGTTTCCCCTGTACATGGGGTTTTTCTTGAGTGAATAGCATTTTGTAGAACTTCTACCTTTCTGTGCATATTCATGTGCTTCTAGGCTTGCTGTTACCCAATAATTGTATGTAAAATTTATTGTTTTGCCTTTAGCATCTCGTTTTCTCTTTCTTTCACAATGTATAGAGCTATTGGTCCTGGGATGCTGTAACCTTCCCTTTCTTTTGTGGAAA GCGTGCTTCCTGCCAAAATTGTGAGATGGATTTCAGAACAGTCTCACTGGCC]
[+] EMBL CB643632             [  GTGTCCTGCGCGCTGTACTGTTCCCACGTCGCGTCGAGGCATCGGTTCGAGCGAGCGCGCGCGCGACGCGGGCGAGGCTCCGGCTCGATTCCGTCGCCACCCTGTGACAGCAGCAGCCACCGCCCACCGCCGCCGCCGCTTTCTGGAGGCTTCCCGTTGGCTCGTGGTTGCGGGGGGACTCGCGGAGTCGCGGTTGCGAGTTGGCTGCCTGCTACTCTGCTAGTGTGCTAAGCCTGCCTTTTAGTTAGTCTGGGAGCACGCTACTGCTACTTTCCCCAATCCAATCCAATCCAATCCAATCCTCGCCGGCGTTGGTTCCCTCGATCGGCGCGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB643633             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCAACAACAGGTTACCTTTGACCGTCTCCTTGCAATGGTTGATGCTGAGAGAGCTTATCATCAGAATGCTGCTGATATTCTGAACAAACTTCACGACGAGATGGTCCAAGCAAAACACCATGATGAGCCGGAAAACCATTATGATGAGACATCATCAGATCCTAAAACAGCTGCAACACATGAGCATTCACGTAGCACATCCGAAGATCACATATTTACTAATACTAGTGAACCTACAAGGACTGAAACCAGTGAACCTACAAGGACTGAAACTAGTGAACCTACAAGGAATGGTCAGGAAGTGCATTATGTTGGAGAGGTAATCCATCCATTCGATGCTCAGGCTGATGGCGAGCTCAGTATTTCCGTGGGAGATTATGTTGTGGTCCGGCAGGTGGCTCCCAATGGGTGGTCTGAAGGGGAATGCAAAGGAAAAGCTGGCTGGTTCCCATCTGCCTATGTGGAGCAGAGGGACAAAGCCCCGGCAAGTAAGGTGATAGAGCCTGGATTGCTGACTACTTAATCTCTCTCATACTAATAGTTGCTTTCATCGCCCTGTTTCCCCTGTACATGGGGTTTTTCTTGAGTGAATAGCATTTTGTAGAACTTCTACCTTTCTGTGCATATTCATGTGCTTCTAGGCTTGCTGTTACCCAATAATTGTATGTAAAATTTATTGTTTTGCCTTTAGCATCTCGTTTTCTCTTTCTTTCACAATGTATAGAGCTATTGGTCCTGGGATGCTGTAACCAGGCCTTTCTTTTGTGGAAACGCGTG                                               ]




>consensus_6049#0
TAGTGTAGTGCGCGCTGTACTGTTCCCACGTCGCGTCGAGGCATCGGTTCGAGCGAGCGC
GCGCGCGACGCGGGCGAGGCTCCGGCTCGATTCCGTCGCCACCCTGTGACAGCAGCAGCC
ACCGCCCACCGCCGCCGCCGCTTTCTGGAGGCTTCCCGTTGGCTCGTGGTTGCGGGGGGA
CTCGCGGAGTCGCGGTTGCGAGTTGGCTGCCTGCTACTCTGCTAGTGTGCTAAGCCTGCC
TTTTAGTTAGTCTGGGAGCACGCTACTGCTACTTTCCCCAATCCAATCCAATCCAATCCA
ATCCTCGCCGGCGTTGGTTCGCTCGATCGGCGCGGCGCGGATGGAGACGCTCAGGAAGCA
GGCCAGCAAGCTCAGGGAGCACGTCGCCAAGCAGCAGCAGGCTGTTCGGAAGCAGTTCAG
TGCACGCTATAACCAGGATCCTTCTCTTGTCGATGAGGCGGAACTTGAGTGCCACCAGAA
TCTTCAGAGGCTATACAACAGTACAAGAGCTGCTAAACATTTCCAACGAAGTATTGTACG
AGGTGTCGAGGGTTTCATTGCTGTCAGCACCAAACAGATGGAGATTGTGAAAAAGCTAGC
TGAGGATTGTTGCAGATATGGAAACGACAATCAAAATTTTGGTTTTATTCTTGCAAGGGC
TTCAGTTGAGTTTGGTAATTCCCATAGCCAAATGGAGAAAGAGCGGGAGAATCTTCTTAA
ATTTCTTGGAGAGCAGGTTTTTGAGCCTCTTCGAGAAATGATAATGAGTGCTCCTCTTGA
AGATGCCCGCCTGTTAACTTACCGTTATCAACGGATCAGACAAGATATGGAATCTCAGAT
AGCTGATGTGATGAGAAAGCAACTGAAGTCCAAGGAGAGTAGCGGTAATGCAGATAATTC
TGTGAAACTGCAACATGCAGAATCAAAATTATCTGAGCTCCGAACTACATTATCAGCATT
AGGAAGAGAGGCAACTGCAGCTATGGAGGCTGTGGAGGTTCAGCAACAACAGGTTACCTT
TGACCGTCTCCTTGCAATGGTTGATGCTGAGAGAGCTTATCATCAGAATGCTGCTGATAT
TCTGAACAAACTTCACGACGAGATGGTCCAAGCAAAACACCATGATGAGCCGGAAAACCA
TTATGATGAGACATCATCAGATCCTAAAACAGCTGCAACACATGAGCATTCACGTAGCAC
ATCCGAAGATCACATATTTACTAATACTAGTGAACCTACAAGGACTGAAACCAGTGAACC
TACAAGGACTGAAACTAGTGAACCTACAAGGAATGGTCAGGAAGTGCATTATGTTGGAGA
GGTAATCCATCCATTCGATGCTCAGGCTGATGGCGAGCTCAGTATTTCCGTGGGAGATTA
TGTTGTGGTCCGGCAGGTGGCTCCCAATGGGTGGTCTGAAGGGGAATGCAAAGGAAAAGC
TGGCTGGTTCCCATCTGCCTATGTGGAGCAGAGGGACAAAGCCCCGGCAAGTAAGGTGAT
AGAGCCTGGATTGCTGACTACTTAATCTCTCTCATACTAATAGTTGCTTTCATCGCCCTG
TTTCCCCTGTACATGGGGTTTTTCTTGAGTGAATAGCATTTTGTAGAACTTCTACCTTTC
TGTGCATATTCATGTGCTTCTAGGCTTGCTGTTACCCAATAATTGTATGTAAAATTTATT
GTTTTGCCTTTAGCATCTCGTTTTCTCTTTCTTTCACAATGTATAGAGCTATTGGTCCTG
GGATGCTGTAACCTTCCCTTTCTTTTGTGGAAAGCGTGCTTCCTGCCAAAATTGTGAGAT
GGATTTCAGAACAGTCTCACTGGCC
clustalw multiple alignements is not computed in this case