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Oryza sativa
cluster # 6060 cluster # 6060       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6060#0 length = 1062 sequences # 3  

consensusID : consensus_6060#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1062
fasta sequence
                              [CTATTGTTGTTAGTTACAGATTAGGGGCACCCGTGATCTTGCCGATTGCTTCAGTATTTGCATGCCCAGATGGCACAGAGAAAGAGGTGCTTAAAATACTCCGTCTGGGCACTGACATTGGAGTTTCAAAACGTGAAGGAAGGTACAATGGTTCCCTGGGAGCAGAGTTGTTGTCCCAAGATGCTCGCCAGGTTCAATTCCTTCCTTTAAGACCATTCTATAGTGGAGAAATTGTGGCATGGAAGACGGGGAAAGAGGGTGAAAAGCTCAGATATGGCAGGGTCCCTGAAGATGTAAGGCCATCAGCTGGCCAAGCTCTTTACAGGTTTCCAGTAGAGACTTCTGCTGGTGAAACTTGCATGCTACTTTCCAGTCAGGTTTACTCATTTAAAAGCGTTTCAATGGCTGATCTCTCTCCTGCACCATTGCAACTGGATAGTGGTAGAGCTGCAGGTGGACAGCAGGGCTTCTCACCCATCAACACAGGAACTGAAGCTGCAGATGATGTGGCTACTGGCCTTGAATATGGGAAGGTATCTTCAACCGAGCTGGTACAGGCAGTCCACGATATGCTTTCAGCTGCAGGGGTAAGGATGGATGCTACAAAGGAAACGCTTCTACAGACTACTCTTTCCTTGCAAGACCAGCTTAAAGAATCTCAAGTGGCTCTACTCGTGGAGCAGGAGAAAGCGGAGGCAGCAGTTAGAGAAGCTGATGTTGCCAAGTCAGCATGGTCATGTCGTGTCTGCCTGAATGCGGAGGTCAACATGACTATAATACCATGCGGTCATGTTCTTTGTAATCGATGCTCAAGTTCGGTTTCACGATGCCCATTTTGTCGGACGCAAGTATCTAGGATGATGAAAATATTCAGGCCTTAATTTCTCTTTCTACAACTTTCGCTTTCTATTAGTATGTATAATATTAGACACGTTAGTTTTTTAGCTGTAAAACTATAGGGCT-GTAAATCGAGGGTGTAAATATACATTATAGTCCATGTACAGCTACGGTGCATTTTACTGTGCCGATTCTTTGGAAAATCGAAATCTATCTTTTTAAAAA]

[+] EMBL AK101752             [CTATTGTTGTTAGTTACAGATTAGGGGCACCCGTGATCTTGCCGATTGCTTCAGTATTTGCATGCCCAGATGGCACAGAGAAAGAGGTGCTTAAAATACTCCGTCTGGGCACTGACATTGGAGTTTCAAAACGTGAAGGAAGGTACAATGGTTCCCTGGGAGCAGAGTTGTTGTCCCAAGATGCTCGCCAGGTTCAATTCCTTCCTTTAAGACCATTCTATAGTGGAGAAATTGTGGCATGGAAGACGGGGAAAGAGGGTGAAAAGCTCAGATATGGCAGGGTCCCTGAAGATGTAAGGCCATCAGCTGGCCAAGCTCTTTACAGGTTTCCAGTAGAGACTTCTGCTGGTGAAACTTGCATGCTACTTTCCAGTCAGGTTTACTCATTTAAAAGCGTTTCAATGGCTGATCTCTCTCCTGCACCATTGCAACTGGATAGTGGTAGAGCTGCAGGTGGACAGCAGGGCTTCTCACCCATCAACACAGGAACTGAAGCTGCAGATGATGTGGCTACTGGCCTTGAATATGGGAAGGTATCTTCAACCGAGCTGGTACAGGCAGTCCACGATATGCTTTCAGCTGCAGGGGTAAGGATGGATGCTACAAAGGAAACGCTTCTACAGACTACTCTTTCCTTGCAAGACCAGCTTAAAGAATCTCAAGTGGCTCTACTCGTGGAGCAGGAGAAAGCGGAGGCAGCAGTTAGAGAAGCTGATGTTGCCAAGTCAGCATGGTCATGTCGTGTCTGCCTGAATGCGGAGGTCAACATGACTATAATACCATGCGGTCATGTTCTTTGTAATCGATGCTCAAGTTCGGTTTCACGATGCCCATTTTGTCGGACGCAAGTATCTAGGATGATGAAAATATTCAGGCCTTAATTTCTCTTTCTACAACTTTCGCTTTCTATTAGTATGTATAATATTAGACACGTTAGTTTTTTAGCTGTAAAACTATAGGGCT GTAAATCGAGGGTGTAAATATACATTATAGTCCATGTACAGCTACGGTGCATTTTACTGTGCC                                    ]
[+] EMBL AK111982             [                                                                                                                                                                                                                                                                                       GGGTCCCTGAAGATGTAAGGCCATCAGCTGGCCAAGCTCTTTACAGGTTTCCAGTAGAGACTTCTGCTGGTGAAACTTGCATGCTACTTTCCAGTCAGGTTTACTCATTTAAAAGCGTTTCAATGGCTGATCTCTCTCCTGCACCATTGCAACTGGATAGTGGTAGAGCTGCAGGTGGACAGCAGGGCTTCTCACCCATCAACACAGGAACTGAAGCTGCAGATGATGTGGCTACTGGCCTTGAATATGGGAAGGTATCTTCAACCGAGCTGGTACAGGCAGTCCACGATATGCTTTCAGCTGCAGGGGTAAGGATGGATGCTACAAAGGAAACGCTTCTACAGACTACTCTTTCCTTGCAAGACCAGCTTAAAGAATCTCAAGTGGCTCTACTCGTGGAGCAGGAGAAAGCGGAGGCAGCAGTTAGAGAAGCTGATGTTGCCAAGTCAGCATGGTCATGTCGTGTCTGCCTGAATGCGGAGGTCAACATGACTATAATACCATGCGGTCATGTTCTTTGTAATCGATGCTCAAGTTCGGTTTCACGATGCCCATTTTGTCGGACGCAAGTATCTAGGATGATGAAAATATTCAGGCCTTAATTTCTCTTTCTACAACTTTCGCTTTCTATTAGTATGTATAATATTAGACACGTTAGTTTTTTAGCTGTAAAACTATAGGGCT GTAAATCGAGGGTGTAAATATACATTA                                                                        ]
[+] EMBL BM421471             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTATAATATTAGACACGTTAGTTTTTTAGCTGTAAAACTATAGGGCTGGTAAATCGAGGGTGTAAATATACATTATAGTCCATGTACAGCT CGGTGCATTTTACTGTGCCGATTCTTTGGAAAATCGAAATCTATCTTTTTAAAAA]


>consensus_6060#0 CTATTGTTGTTAGTTACAGATTAGGGGCACCCGTGATCTTGCCGATTGCTTCAGTATTTG CATGCCCAGATGGCACAGAGAAAGAGGTGCTTAAAATACTCCGTCTGGGCACTGACATTG GAGTTTCAAAACGTGAAGGAAGGTACAATGGTTCCCTGGGAGCAGAGTTGTTGTCCCAAG ATGCTCGCCAGGTTCAATTCCTTCCTTTAAGACCATTCTATAGTGGAGAAATTGTGGCAT GGAAGACGGGGAAAGAGGGTGAAAAGCTCAGATATGGCAGGGTCCCTGAAGATGTAAGGC CATCAGCTGGCCAAGCTCTTTACAGGTTTCCAGTAGAGACTTCTGCTGGTGAAACTTGCA TGCTACTTTCCAGTCAGGTTTACTCATTTAAAAGCGTTTCAATGGCTGATCTCTCTCCTG CACCATTGCAACTGGATAGTGGTAGAGCTGCAGGTGGACAGCAGGGCTTCTCACCCATCA ACACAGGAACTGAAGCTGCAGATGATGTGGCTACTGGCCTTGAATATGGGAAGGTATCTT CAACCGAGCTGGTACAGGCAGTCCACGATATGCTTTCAGCTGCAGGGGTAAGGATGGATG CTACAAAGGAAACGCTTCTACAGACTACTCTTTCCTTGCAAGACCAGCTTAAAGAATCTC AAGTGGCTCTACTCGTGGAGCAGGAGAAAGCGGAGGCAGCAGTTAGAGAAGCTGATGTTG CCAAGTCAGCATGGTCATGTCGTGTCTGCCTGAATGCGGAGGTCAACATGACTATAATAC CATGCGGTCATGTTCTTTGTAATCGATGCTCAAGTTCGGTTTCACGATGCCCATTTTGTC GGACGCAAGTATCTAGGATGATGAAAATATTCAGGCCTTAATTTCTCTTTCTACAACTTT CGCTTTCTATTAGTATGTATAATATTAGACACGTTAGTTTTTTAGCTGTAAAACTATAGG GCTGTAAATCGAGGGTGTAAATATACATTATAGTCCATGTACAGCTACGGTGCATTTTAC TGTGCCGATTCTTTGGAAAATCGAAATCTATCTTTTTAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)