cluster # 6079

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6079 cluster # 6079 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6079#0 length = 727 sequences # 3

consensusID : consensus_6079#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 727
fasta sequence

                              [AAATCTACCCTCGGTGTATTTGGGGAGGAAGTGGGAGAGCATGAAAACAATAAGGAGGAGAACAATACGGAAGGTGATCCTGAACTTGTTGACGATTCTGAA-TTTTACCAACAACTTCTAAAGGAGTTTCTTGAGT-CATGTGATGCAGGCG-CATCTGAGTCAGCATTTTATGCTCTAAAGAAGCAGCAGCATAAAAAGAGAAAACTGGTTGATCGTCGTGCTTCGAAGAGCAGAAAGATAAGATACCATGTCCACGAGAAGATTGCAAATTTCATGGCCCCAGTACCCATGGTTATTCCTCCAATGGCTCCAAAATTGTTTGAGAATTTGTTTGGGATGGGAAACCAAAAGTCGACCACAGCGTGAATGCTTGACGATGATACTGCAATGTTGACATTAGGACGTATAACCCTTTCTTGACTTATAAAGGCCAGTCGTGTCTCGTAAAGATTCTGATTTGATCAAATTCGATGGTATCCGTGTTGGACTGGGGAACTGCATTTCGATTCATACTCATATTTGTTTAGCAATCTGGTTCTTAACTGACGAGTAGTTATTAAGAGGGATCTCTATGAAAGAATTTGGAGGATAATTTAGATTATCAGTTGAGGGAGGATAATTTAGATTATCAGTTGAGGTCGTTTCATAGTTTGTATGTTTTTCTCTTAAGAATAGAGCACCAATTAATTCTTGTGATGTCTTGTAGCGAGTAAAAAAAAAAAAAAAA]

[-] EMBL CB618087             [AAATCTACCCTCGGTGTATTTGGGGAGGAAGTGGGAGAGCATGAAAACAATAAGGAGGAGAACAATACGGAAGGTGATCCTGAACTTGTTGACGATTCTGAA TTTTACCAACAACTTCTAAAGGAGTTTCTTGAGT CATGTGATGCAGGCG CATCTGAGTCAGCATTTTATGCTCTAAAGAAGCAGCAGCATAAAAAGAGAAAACTGGTTGATCGTCGTGCTTCGAAGAGCAGAAAGATAAGATACCATGTCCACGAGAAGATTGCAAATTTCATGGCCCCAGTACCCATGGTTATTCCTCCAATGGCTCCAAAATTGTTTGAGAATTTGTTTGGGATGGGAAACCAAAAGTCGACCACAGCGTGAATGCTTGACGATGATACTGCAATGTTGACATTAGGACGTATAACCCTTTCTTGACTTATAAAGGCCAGTCGTGTCTCGTAAAGATTCTGATTTGATCAAATTCGATGGTATCCGTGTTGGACTGGGGAACTGCATTTCGATTCATACTCATATTTGTTTAGCAATCTGGTTCTTAACTGACGAGTAGTTATTAAGAGGGATCTCTATGAAAGAATTCGGAGGATAATTTAGATTATCAGTTGAGG                                                                                                                    ]
[-] EMBL CB618089             [AAATCTACCCTCGGTGTATTTGGGGAGGAAGTGGGAGAGCATGAAAACAATAAGGAGGAGAACAATACGGAAGGTGATCCTGAACTTGTTGACGATTCTGAA TTTTACCAACAACTTCTAAAGGAGTTTCTTGAGT CATGTGATGCAGGCG CATCTGAGTCAGCATTTTATGCTCTAAAGAAGCAGCAGCATAAAAAGAGAAAACTGGTTGATCGTCGTGCTTCGAAGAGCAGAAAGATAAGATACCATGTCCACGAGAAGATTGCAAATTTCATGGCCCCAGTACCCATGGTTATTCCTCCAATGGCTCCAAAATTGTTTGAGAATTTGTTTGGGATGGGAAACCAAAAGTCGACCACAGCGTGAATGCTTGACGATGATACTGCAATGTTGACATTAGGACGTATAACCCTTTCTTGACTTATAAAGGCCAGTCGTGTCTCGTAAAGATTCTGATTTGATCAAATTCGATGGTATCCGTGTTGGACTGGGGAACTGCATTTCGATTCATACTCATATTTGTTTAGCAATCTGGTTCTTAACTGACGAGTAGTTATTAAGAGGGATCTCTATGAAAGAATTTGGAGGATAATTTAGATTATCAGTTGAGG                                                                                                                    ]
[+] EMBL AU100694             [                                                                                        TTGACGATTCTGAATTTTTCCCAACACCTTCTAAAGGAGTTNCTTGAGTCCATGTGATGCAGGCGCCATCTGAGTCAGCATTTTNTGCTCTAAAGAAGCAGCAGCATNAAAAGAGAAAACTGGTTGATCGTCGTGCTTCGAAGAGCNGAAAGATAAGATNCCATGTCCACGAGAAGATTGCAAATTTCATGGCCCCAGTACCCATGGTTATNCCTCCAATGGCTCCAAAATTGTTTGAGAATTTGTTTGGGATGGGAANCCAAAAGTCGACCACAGCGTGAATGCTTGACGATGATACTGCAATGTTGACATTAGGACGTATAACCCTTTCTTGACTTATAAAGGCCAGTCGTGTCTCGTAAAGATTCTGATTTGATCAAATTCGATGGTATCCGTGTTGGACTGGGGAACTGCATTTCGATTCATACTCATATTTGTTTAGCAATCTGGTTCTTAACTGACGAGTAGTTATTAAGAGGGATCTCTATGAAAGAATTTGGAGGATAATTTAGATTATCAGAATTTGGAGGATAATTTAGATTATCAGTTGAGGTCGTTTCATAGTTTGTATGTTTTTCTCTTAAGAATAGAGCACCAATTAATTCTTGTGATGTCTTGTAGCGAGTAAAAAAAAAAAAAAAA]




>consensus_6079#0
AAATCTACCCTCGGTGTATTTGGGGAGGAAGTGGGAGAGCATGAAAACAATAAGGAGGAG
AACAATACGGAAGGTGATCCTGAACTTGTTGACGATTCTGAATTTTACCAACAACTTCTA
AAGGAGTTTCTTGAGTCATGTGATGCAGGCGCATCTGAGTCAGCATTTTATGCTCTAAAG
AAGCAGCAGCATAAAAAGAGAAAACTGGTTGATCGTCGTGCTTCGAAGAGCAGAAAGATA
AGATACCATGTCCACGAGAAGATTGCAAATTTCATGGCCCCAGTACCCATGGTTATTCCT
CCAATGGCTCCAAAATTGTTTGAGAATTTGTTTGGGATGGGAAACCAAAAGTCGACCACA
GCGTGAATGCTTGACGATGATACTGCAATGTTGACATTAGGACGTATAACCCTTTCTTGA
CTTATAAAGGCCAGTCGTGTCTCGTAAAGATTCTGATTTGATCAAATTCGATGGTATCCG
TGTTGGACTGGGGAACTGCATTTCGATTCATACTCATATTTGTTTAGCAATCTGGTTCTT
AACTGACGAGTAGTTATTAAGAGGGATCTCTATGAAAGAATTTGGAGGATAATTTAGATT
ATCAGTTGAGGGAGGATAATTTAGATTATCAGTTGAGGTCGTTTCATAGTTTGTATGTTT
TTCTCTTAAGAATAGAGCACCAATTAATTCTTGTGATGTCTTGTAGCGAGTAAAAAAAAA
AAAAAAA

clustalw multiple alignements is not computed in this case