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Oryza sativa
cluster # 6084 cluster # 6084       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6084#0 length = 3162 sequences # 3  

consensusID : consensus_6084#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3162
fasta sequence
                              [CATGGCGCCGCCACAAATGTATGAGCNCCGCCTCCTCGCCNCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGNCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCAACTCANCTTATTTCATCAAACACTTTTCCGCAACACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGGT-AATGTCATGTGAATGNTG-TTTTTCTTATGTCGGACGGACCATTGGCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTACCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCACCGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGTTGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATCTTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACATAGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGAGGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTATCATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATGGGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTACTTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTTTAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAATTCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGACACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTACATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAAAGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGAGCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCATGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCAGGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGAGGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGATGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCTTAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGACAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAATTTGGTATCACAACGCACAATTGAAGAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAAGCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGAAAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGATACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTATGTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGAAAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGTTACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATCCTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGAAAGGCAAAGAATAGCACCTGAAGAAAAGTTCCTAAAACGTGAAGCTATTAAGAAAAAGGTGGAAGAAAAGAGATTAGCCAAATGGGAATCCTTGGGGTACCAGACATTAAAGATCAAAGATCCTGACATCTTACCGAACCAGAATATTCCAGACTCTGGATCCGTCCAACTTGTATATGGAGATTGCACTAATCCTTCAGTAGTTTGCCCTGCAAAGCCTGCCATCATATTCAGTTGTGTTGATAATTCAGGAACC-TGGGGACATGGAGGAATGTT-CGATGCTTTGG-CCAATCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAG-CCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAATGTTTGCCTGAACAAAAAAAAAAAAAA]

[+] EMBL C26323               [CATGGCGCCGCCACAAATGTATGAGCNCCGCCTCCTCGCCNCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGNCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCAACTCANCTTATTTCATCAAACACTTTTCCGCAACACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGGTNAATGTCATGTGAATGNTG TTTTTCTTATGTCGGACGGACCATTGGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK066228             [                          gCCGCCTCCTCGCCGCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGCCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCACCTCACCTTATTTCATCAAACACTTTTCCGCACCACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGCT CATGTCATGTGACTGCTGTTTTTTCTTATGTCGGACGGACCATGGCCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTACCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCACCGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGTTGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATCTTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACATAGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGAGGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTATCATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATGGGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTACTTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTTTAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAATTCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGACACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTACATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAAAGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGAGCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCATGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCAGGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGAGGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGATGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCTTAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGACAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAATTTGGTATCACAACGCACAATTGAAGAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAAGCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGAAAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGATACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTATGTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGAAAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGTTACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATCCTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGAAAGGCAAAGAATAGCACCTGAAGAAAAGTTCCTAAAACGTGAAGCTATTAAGAAAAAGGTGGAAGAAAAGAGATTAGCCAAATGGGAATCCTTGGGGTACCAGACATTAAAGATCAAAGATCCTGACATCTTACCGAACCAGAATATTCCAGACTCTGGATCCGTCCAACTTGTATATGGAGATTGCACTAATCCTTCAGTAGTTTGCCCTGCAAAGCCTGCCATCATATTCAGTTGTGTTGATAATTCAGGAACC TGGGGACATGGAGGAATGTT CGATGCTTTGG CCAATCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAG CCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAA                           ]
[+] EMBL AU100698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACCTTGGGNACATGGAGGAATGTTCCNATGCTTTGGCCCANTCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAGCCCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAATGTTTGCCTGAACAAAAAAAAAAAAAA]


>consensus_6084#0 CATGGCGCCGCCACAAATGTATGAGCNCCGCCTCCTCGCCNCCGCCTCCCTCCTCCTCTC CGCCGATGCGCAGGGCCAACCACCCCACGNCGCCGCCCAACTCGGAGTCGGAGTCACGGC CGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGG CGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGC CGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTT GTTCTATGCTGTTTCAACTCANCTTATTTCATCAAACACTTTTCCGCAACACCATTTTTC GTTACTGTTAATAATGTGTAATCAAGGTAATGTCATGTGAATGNTGTTTTTCTTATGTCG GACGGACCATTGGCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTA CCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCAC CGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGT TGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATC TTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACAT AGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGA GGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTAT CATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATG GGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTAC TTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTT TAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAAT TCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGAC ACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTAC ATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAA AGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGA GCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCA TGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCA GGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGA GGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGA TGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCT TAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGA CAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAA TTTGGTATCACAACGCACAATTGAAGAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAA GCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGA AAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGA TACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTAT GTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGA AAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGT TACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATC CTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGA AAGGCAAAGAATAGCACCTGAAGAAAAGTTCCTAAAACGTGAAGCTATTAAGAAAAAGGT GGAAGAAAAGAGATTAGCCAAATGGGAATCCTTGGGGTACCAGACATTAAAGATCAAAGA TCCTGACATCTTACCGAACCAGAATATTCCAGACTCTGGATCCGTCCAACTTGTATATGG AGATTGCACTAATCCTTCAGTAGTTTGCCCTGCAAAGCCTGCCATCATATTCAGTTGTGT TGATAATTCAGGAACCTGGGGACATGGAGGAATGTTCGATGCTTTGGCCAATCTCTCAAC ATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCT TCACTTGATTCAGTTAGATGAAGCCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGT CGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTC CATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGC GAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATC AGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACAT CTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAA TGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTG TAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCT TGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGA ACCGAAAACGAAAAATGTTTGCCTGAACAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)