These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6084#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3162 fasta sequence [CATGGCGCCGCCACAAATGTATGAGCNCCGCCTCCTCGCCNCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGNCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCAACTCANCTTATTTCATCAAACACTTTTCCGCAACACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGGT-AATGTCATGTGAATGNTG-TTTTTCTTATGTCGGACGGACCATTGGCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTACCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCACCGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGTTGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATCTTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACATAGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGAGGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTATCATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATGGGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTACTTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTTTAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAATTCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGACACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTACATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAAAGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGAGCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCATGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCAGGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGAGGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGATGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCTTAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGACAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAATTTGGTATCACAACGCACAATTGAAGAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAAGCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGAAAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGATACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTATGTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGAAAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGTTACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATCCTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGAAAGGCAAAGAATAGCACCTGAAGAAAAGTTCCTAAAACGTGAAGCTATTAAGAAAAAGGTGGAAGAAAAGAGATTAGCCAAATGGGAATCCTTGGGGTACCAGACATTAAAGATCAAAGATCCTGACATCTTACCGAACCAGAATATTCCAGACTCTGGATCCGTCCAACTTGTATATGGAGATTGCACTAATCCTTCAGTAGTTTGCCCTGCAAAGCCTGCCATCATATTCAGTTGTGTTGATAATTCAGGAACC-TGGGGACATGGAGGAATGTT-CGATGCTTTGG-CCAATCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAG-CCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAATGTTTGCCTGAACAAAAAAAAAAAAAA] [+] EMBL C26323 [CATGGCGCCGCCACAAATGTATGAGCNCCGCCTCCTCGCCNCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGNCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCAACTCANCTTATTTCATCAAACACTTTTCCGCAACACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGGTNAATGTCATGTGAATGNTG TTTTTCTTATGTCGGACGGACCATTGGCAGA ] [+] EMBL AK066228 [ gCCGCCTCCTCGCCGCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGCCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCACCTCACCTTATTTCATCAAACACTTTTCCGCACCACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGCT CATGTCATGTGACTGCTGTTTTTTCTTATGTCGGACGGACCATGGCCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTACCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCACCGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGTTGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATCTTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACATAGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGAGGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTATCATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATGGGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTACTTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTTTAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAATTCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGACACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTACATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAAAGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGAGCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCATGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCAGGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGAGGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGATGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCTTAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGACAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAATTTGGTATCACAACGCACAATTGAAGAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAAGCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGAAAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGATACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTATGTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGAAAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGTTACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATCCTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGAAAGGCAAAGAATAGCACCTGAAGAAAAGTTCCTAAAACGTGAAGCTATTAAGAAAAAGGTGGAAGAAAAGAGATTAGCCAAATGGGAATCCTTGGGGTACCAGACATTAAAGATCAAAGATCCTGACATCTTACCGAACCAGAATATTCCAGACTCTGGATCCGTCCAACTTGTATATGGAGATTGCACTAATCCTTCAGTAGTTTGCCCTGCAAAGCCTGCCATCATATTCAGTTGTGTTGATAATTCAGGAACC TGGGGACATGGAGGAATGTT CGATGCTTTGG CCAATCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAG CCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAA ] [+] EMBL AU100698 [ AACCTTGGGNACATGGAGGAATGTTCCNATGCTTTGGCCCANTCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAGCCCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAATGTTTGCCTGAACAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||