cluster # 6085

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Oryza sativa
cluster # 6085 cluster # 6085 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6085#0 length = 608 sequences # 3

consensusID : consensus_6085#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 608
fasta sequence

                              [CGACGACGACGACGATGTCGACGACGGCGACGAACACCCCAAGCCCCTTCTTCTCCTCGGAGAGCCCGGTGGTCAAGAGCGAGCCCGTCTGCTCCGCCTCCGAGAGCTCTTCCTCGGCCGACGGCGACGTGTCATCGACGGGCTCCTCCGACGTCGTCCCGGAGATGCAGCTGCTCGACTTCTCGGAGGCGCCATGGGACGAGTCCGAGAGCTTCCTGCTGCACAAGTACCCGTCGCTGGAGATCGACTGGGACGCGATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGTT-CTTGATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTTGATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCAACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGGTTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAACTCTACATTGTAGTAGTTCATATATCCAATAAAGAACCATTTTAGCACATTCAAAAAA--AAAAAAAAAA]

[+] EMBL CF303709             [CGACGACGACGACGATGTCGACGACGGCGACGAACACCCCAAGCCCCTTCTTCTCCTCGGAGAGCCCGGTGGTCAAGAGCGAGCCCGTCTGCTCCGCCTCCGAGAGCTCTTCCTCGGCCGACGGCGACGTGTCATCGACGGGCTCCTCCGACGTCGTCCCGGAGATGCAGCTGCTCGACTTCTCGGAGGCGCCATGGGACGAGTCCGAGAGCTTCCTGCTGCACAAGTACCCGTCGCTGGAGATCGACTGGGACGCGATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGTT CTTGATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTTGATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCAACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGGTTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAACTCTACATTGTAG                                                         ]
[+] EMBL CF303524             [                                                                         CAAGAGCGAGCCCGTCTGCTCCGCCTCCGAGAGCTCTTCCTCGGCCGACGGCGACGTGTCATCGACGGGCTCCTCCGACGTCGTCCCGGAGATGCAGCTGCTCGACTTCTCGGAGGCGCCATGGGACGAGTCCGAGAGCTTCCTGCTGCACAAGTACCCGTCGCTGGAGATCGACTGGGACGCGATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGTT CTTGATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTTGATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCAACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGGTTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAACTCTACATTGTAGTAGTTCATATATCCAATAAAGAACCATTTTAGCACATTCAAAAAA  AAAAAAAAAA]
[+] EMBL AU183880             [                                                                                                                                                                                                                                                                 ATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGTTCCNNTATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTTGATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCAACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGGTTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAACTCTACATTGTAGTAGTTCATATATCCAATAAAGAACCATTTTAGCAAA   AAAAAAGCAAAAAAAAAA]




>consensus_6085#0
CGACGACGACGACGATGTCGACGACGGCGACGAACACCCCAAGCCCCTTCTTCTCCTCGG
AGAGCCCGGTGGTCAAGAGCGAGCCCGTCTGCTCCGCCTCCGAGAGCTCTTCCTCGGCCG
ACGGCGACGTGTCATCGACGGGCTCCTCCGACGTCGTCCCGGAGATGCAGCTGCTCGACT
TCTCGGAGGCGCCATGGGACGAGTCCGAGAGCTTCCTGCTGCACAAGTACCCGTCGCTGG
AGATCGACTGGGACGCGATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGT
TCTTGATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTT
GATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCA
ACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGG
TTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAA
CTCTACATTGTAGTAGTTCATATATCCAATAAAGAACCATTTTAGCACATTCAAAAAAAA
AAAAAAAA

clustalw multiple alignements is not computed in this case