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Oryza sativa
cluster # 6091 cluster # 6091       Sequences # 3       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6091#0 length = 2853 sequences # 1  
 consensus_6091#1 length = 819 sequences # 1  
consensus_6091#2 length = 533 sequences # 1  
consensusID : consensus_6091#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2853
fasta sequence 
                              [ATGAAGGCACCAGCGGAAAACAAGAGAGAGGGGTGGAGTGCCGCGGCACCGATGGCGCCGGCCGCTTCCCGCGGTGGATCCGACGGCGACGACGGTGCCGGCGGTTTCCCCCGGCCCGATCCACCCGCGGCAACGGCTTCCCGTGGTGGATCTGACGGCGATGACGGCGGTGGCGGTTGCAACAGCTACGATATACTGGGCAAGCTGCCTTCGTCACCGGGACGAGATGGTCGCCGCCGCTGCCGATCTGAGCCCGACTCCTGGCCACCCTCGAAGCTCCTCCCCACATTGAAACTTCTAGAAGATCCTTCATAGTCCCTCCAAGCTATTTTTATTGTCCCTTCAAGTTCGATTCCCCCCACAACCGATCCAAAGATCGGGTCGTCGTAGCCATTGCTGCAGCTCCAGCTATCTCAGGCTCCTCCAGGAGAGCCCAATCCGTGTTGCCGCTAGCTGTGATGTGAGGCTACTATCTGCAATTACATGTGGTGATGGCTTCCATGTCAAAATTGGTGGTTGAGGGCTAATTTGATAATATTGCTTTGAGGACTAATTCAGCGTTGAGGACTAATTCGATAATATTGCTTCATCCCACATAATGTCGTGTATACTGAAATATTCAGCGATATCGCGAATCAACGTGCTTAATTTTACCAGATTGTAGTGCATGGTGCCCAAAATCATCAAATTGAGAGATATATGATGTGTTATGCTTCTTCCGTGTGGTTGTATGTTCCCACTGTAGTGTGCAGTTCTTCACCTAAATACAAAGGTTGATCAAGTTGTTTATTGGTGCCATCTATTTGTTGTTATCCTGGTAGTCTACTATCGATGCAAAGTTGCAAACGACAACCAAACCCAGAGGCTGACCATTATCATTTCCTTTCCTTCATTCAGTTACAATGCTACAAACTTTTCCATGTTTGTTGTTGTGCGTACCTCTATATGTAATGCACTATGCAAAATCATTAGGTTGTATATGCTACCACCAATATGCACACACTTGGTCTTTGATGATGTTCTTATGCCTATGATGTACCGTATTTGTTAATGTGTGTATTGAGATGCTGCAGTTCCTGTTCATTTGCCAATATTATTGACACGCCGTATGCATTAGTAAACTAATATGCTATTAGCAATGTTCAGGGCTTCAGGCACATCTAATTTGCTATCTTTTACTCCTATACGTTTGCAATGTTTAGATTATCCACACAATTCTTATTTTACCAAAATATTGTATTGTATTTGTTGATGTCTCTTCATCCTTTAGTTTTTTTATGCTTTTTATTGGGTCCGCGGCAAAGGCCGCGGGGGGTACGACCTAGTTACAATGATGGAGCTAGCGAACAGGCGATGAACAGGTACGGTAGAGCATTATAGCCTAACTAGTTTCACTTCTTTTTATTTCTTAAGTTCGTTGTTCATCATTTAACTCTTTGTTTGGTTTAGCTTTAATCATTTAATTTGAATTAATCTTGTCTCTTCCATCAGTTCAATTAGCCCAAGATTAGGGTGGCTATACCACCAATCAGTGGTGCTCATCAAATAGACTTAGAGAGTGACCATCTACTCCCTCAGTCCCAAATTATAGGGCAACTTCTTTTTTAAAAAAATCAAGCTCAGTAACTTTTGACGAATAATAATATTAACCATATATATGCTAAATATTATGTATGTTATATCACTAGATTTATATTTTAAAGTACTTTCATCTGATGCTAATTTTCATCTGATGCTAATTTTATATTTGTTGGGAACATAACATGGAATAAATTAATGGTCAAAGTATGTCACTGAAGACCATGTAGAAAAAATATAGGCTTATAATTTGGGACTAGATTTATATTTTAAAGTACTTTCATCTGATGCTAATTTTATATTTGTTGGAAACATAACATGGAATAAATTAATGGTCAAAGTATGTCACCGAAGACCATGTAGAAAAAATATAGGCTTATAATTTGGGACGGAGGGAGTATTTGTTAAGTGACAGTTTTTTTTGTCATTAGTCACTCTTCTAAGTAGATCAACATCCAAAACTCACAAATTAGCAATTTAATCTGTAAAAGAACAAAAAGGTTGTACCAAGAGTATACAAGTTTAGTCAACACACCGTACAAATTTAGTGGAACGACAACCAAGAAAAAAAATTCAGGCAACTACAGTGAGCAAAATCATCATATATAAAAACACGCATCCGGGTGAACTCTTAAAAAAAAAGAACATACCAGATTAAAAGATGCACCAAAGTTGGTAAAAGATTTTGTGCAAGTCTAAACTGCAGTTGGTCTAGGACCTCTAGGTGACTGACAAATAAGAAATTTCCTGGCAACTGATAAATAGCAAAACAAAAAAAAGGAATAACAGTTCTTCCACGGCATTCCAACTTCCTATTAGGCATGAAAACTGAATAGAGTTTAGACTATGCAAAATACATGCAAGACAAAGGGCAGATATAGCTTGTCCAACATCCCTTCATTATTTTGTTTCTTTGGACCAGGATGGAGGATGCCGACGACGTGCAAGACTTTCACTGCAATATTATCAGAAGCCGATCGAATAATTCTGCAGATTCCAGGGTGAGCAAGATAGAGACATTGTTCTATGCCAACAAGGAGAGGACAGGCAGCCACATTTTGTGCTTGGTGAAGGCTCTTCATCAGCTGGTTTGCTATGAGAGAGAGGCAGCTGGCCAACATGAGGCTGGATATTGAACTGCACCGGCCACGGGCTTTCCGGACCAGGCCTAGCTAGTTAGCATGTCTGAGCCATATATGCAGACTAGTTGATATCCCGCGCTTTGCTACGAAATATGTGAATGAATGCATGTTATATATTATAGAAATGATAGAT]

[+] EMBL AK119279             [ATGAAGGCACCAGCGGAAAACAAGAGAGAGGGGTGGAGTGCCGCGGCACCGATGGCGCCGGCCGCTTCCCGCGGTGGATCCGACGGCGACGACGGTGCCGGCGGTTTCCCCCGGCCCGATCCACCCGCGGCAACGGCTTCCCGTGGTGGATCTGACGGCGATGACGGCGGTGGCGGTTGCAACAGCTACGATATACTGGGCAAGCTGCCTTCGTCACCGGGACGAGATGGTCGCCGCCGCTGCCGATCTGAGCCCGACTCCTGGCCACCCTCGAAGCTCCTCCCCACATTGAAACTTCTAGAAGATCCTTCATAGTCCCTCCAAGCTATTTTTATTGTCCCTTCAAGTTCGATTCCCCCCACAACCGATCCAAAGATCGGGTCGTCGTAGCCATTGCTGCAGCTCCAGCTATCTCAGGCTCCTCCAGGAGAGCCCAATCCGTGTTGCCGCTAGCTGTGATGTGAGGCTACTATCTGCAATTACATGTGGTGATGGCTTCCATGTCAAAATTGGTGGTTGAGGGCTAATTTGATAATATTGCTTTGAGGACTAATTCAGCGTTGAGGACTAATTCGATAATATTGCTTCATCCCACATAATGTCGTGTATACTGAAATATTCAGCGATATCGCGAATCAACGTGCTTAATTTTACCAGATTGTAGTGCATGGTGCCCAAAATCATCAAATTGAGAGATATATGATGTGTTATGCTTCTTCCGTGTGGTTGTATGTTCCCACTGTAGTGTGCAGTTCTTCACCTAAATACAAAGGTTGATCAAGTTGTTTATTGGTGCCATCTATTTGTTGTTATCCTGGTAGTCTACTATCGATGCAAAGTTGCAAACGACAACCAAACCCAGAGGCTGACCATTATCATTTCCTTTCCTTCATTCAGTTACAATGCTACAAACTTTTCCATGTTTGTTGTTGTGCGTACCTCTATATGTAATGCACTATGCAAAATCATTAGGTTGTATATGCTACCACCAATATGCACACACTTGGTCTTTGATGATGTTCTTATGCCTATGATGTACCGTATTTGTTAATGTGTGTATTGAGATGCTGCAGTTCCTGTTCATTTGCCAATATTATTGACACGCCGTATGCATTAGTAAACTAATATGCTATTAGCAATGTTCAGGGCTTCAGGCACATCTAATTTGCTATCTTTTACTCCTATACGTTTGCAATGTTTAGATTATCCACACAATTCTTATTTTACCAAAATATTGTATTGTATTTGTTGATGTCTCTTCATCCTTTAGTTTTTTTATGCTTTTTATTGGGTCCGCGGCAAAGGCCGCGGGGGGTACGACCTAGTTACAATGATGGAGCTAGCGAACAGGCGATGAACAGGTACGGTAGAGCATTATAGCCTAACTAGTTTCACTTCTTTTTATTTCTTAAGTTCGTTGTTCATCATTTAACTCTTTGTTTGGTTTAGCTTTAATCATTTAATTTGAATTAATCTTGTCTCTTCCATCAGTTCAATTAGCCCAAGATTAGGGTGGCTATACCACCAATCAGTGGTGCTCATCAAATAGACTTAGAGAGTGACCATCTACTCCCTCAGTCCCAAATTATAGGGCAACTTCTTTTTTAAAAAAATCAAGCTCAGTAACTTTTGACGAATAATAATATTAACCATATATATGCTAAATATTATGTATGTTATATCACTAGATTTATATTTTAAAGTACTTTCATCTGATGCTAATTTTCATCTGATGCTAATTTTATATTTGTTGGGAACATAACATGGAATAAATTAATGGTCAAAGTATGTCACTGAAGACCATGTAGAAAAAATATAGGCTTATAATTTGGGACTAGATTTATATTTTAAAGTACTTTCATCTGATGCTAATTTTATATTTGTTGGAAACATAACATGGAATAAATTAATGGTCAAAGTATGTCACCGAAGACCATGTAGAAAAAATATAGGCTTATAATTTGGGACGGAGGGAGTATTTGTTAAGTGACAGTTTTTTTTGTCATTAGTCACTCTTCTAAGTAGATCAACATCCAAAACTCACAAATTAGCAATTTAATCTGTAAAAGAACAAAAAGGTTGTACCAAGAGTATACAAGTTTAGTCAACACACCGTACAAATTTAGTGGAACGACAACCAAGAAAAAAAATTCAGGCAACTACAGTGAGCAAAATCATCATATATAAAAACACGCATCCGGGTGAACTCTTAAAAAAAAAGAACATACCAGATTAAAAGATGCACCAAAGTTGGTAAAAGATTTTGTGCAAGTCTAAACTGCAGTTGGTCTAGGACCTCTAGGTGACTGACAAATAAGAAATTTCCTGGCAACTGATAAATAGCAAAACAAAAAAAAGGAATAACAGTTCTTCCACGGCATTCCAACTTCCTATTAGGCATGAAAACTGAATAGAGTTTAGACTATGCAAAATACATGCAAGACAAAGGGCAGATATAGCTTGTCCAACATCCCTTCATTATTTTGTTTCTTTGGACCAGGATGGAGGATGCCGACGACGTGCAAGACTTTCACTGCAATATTATCAGAAGCCGATCGAATAATTCTGCAGATTCCAGGGTGAGCAAGATAGAGACATTGTTCTATGCCAACAAGGAGAGGACAGGCAGCCACATTTTGTGCTTGGTGAAGGCTCTTCATCAGCTGGTTTGCTATGAGAGAGAGGCAGCTGGCCAACATGAGGCTGGATATTGAACTGCACCGGCCACGGGCTTTCCGGACCAGGCCTAGCTAGTTAGCATGTCTGAGCCATATATGCAGACTAGTTGATATCCCGCGCTTTGCTACGAAATATGTGAATGAATGCATGTTATATATTATAGAAATGATAGAT]




>consensus_6091#0
ATGAAGGCACCAGCGGAAAACAAGAGAGAGGGGTGGAGTGCCGCGGCACCGATGGCGCCG
GCCGCTTCCCGCGGTGGATCCGACGGCGACGACGGTGCCGGCGGTTTCCCCCGGCCCGAT
CCACCCGCGGCAACGGCTTCCCGTGGTGGATCTGACGGCGATGACGGCGGTGGCGGTTGC
AACAGCTACGATATACTGGGCAAGCTGCCTTCGTCACCGGGACGAGATGGTCGCCGCCGC
TGCCGATCTGAGCCCGACTCCTGGCCACCCTCGAAGCTCCTCCCCACATTGAAACTTCTA
GAAGATCCTTCATAGTCCCTCCAAGCTATTTTTATTGTCCCTTCAAGTTCGATTCCCCCC
ACAACCGATCCAAAGATCGGGTCGTCGTAGCCATTGCTGCAGCTCCAGCTATCTCAGGCT
CCTCCAGGAGAGCCCAATCCGTGTTGCCGCTAGCTGTGATGTGAGGCTACTATCTGCAAT
TACATGTGGTGATGGCTTCCATGTCAAAATTGGTGGTTGAGGGCTAATTTGATAATATTG
CTTTGAGGACTAATTCAGCGTTGAGGACTAATTCGATAATATTGCTTCATCCCACATAAT
GTCGTGTATACTGAAATATTCAGCGATATCGCGAATCAACGTGCTTAATTTTACCAGATT
GTAGTGCATGGTGCCCAAAATCATCAAATTGAGAGATATATGATGTGTTATGCTTCTTCC
GTGTGGTTGTATGTTCCCACTGTAGTGTGCAGTTCTTCACCTAAATACAAAGGTTGATCA
AGTTGTTTATTGGTGCCATCTATTTGTTGTTATCCTGGTAGTCTACTATCGATGCAAAGT
TGCAAACGACAACCAAACCCAGAGGCTGACCATTATCATTTCCTTTCCTTCATTCAGTTA
CAATGCTACAAACTTTTCCATGTTTGTTGTTGTGCGTACCTCTATATGTAATGCACTATG
CAAAATCATTAGGTTGTATATGCTACCACCAATATGCACACACTTGGTCTTTGATGATGT
TCTTATGCCTATGATGTACCGTATTTGTTAATGTGTGTATTGAGATGCTGCAGTTCCTGT
TCATTTGCCAATATTATTGACACGCCGTATGCATTAGTAAACTAATATGCTATTAGCAAT
GTTCAGGGCTTCAGGCACATCTAATTTGCTATCTTTTACTCCTATACGTTTGCAATGTTT
AGATTATCCACACAATTCTTATTTTACCAAAATATTGTATTGTATTTGTTGATGTCTCTT
CATCCTTTAGTTTTTTTATGCTTTTTATTGGGTCCGCGGCAAAGGCCGCGGGGGGTACGA
CCTAGTTACAATGATGGAGCTAGCGAACAGGCGATGAACAGGTACGGTAGAGCATTATAG
CCTAACTAGTTTCACTTCTTTTTATTTCTTAAGTTCGTTGTTCATCATTTAACTCTTTGT
TTGGTTTAGCTTTAATCATTTAATTTGAATTAATCTTGTCTCTTCCATCAGTTCAATTAG
CCCAAGATTAGGGTGGCTATACCACCAATCAGTGGTGCTCATCAAATAGACTTAGAGAGT
GACCATCTACTCCCTCAGTCCCAAATTATAGGGCAACTTCTTTTTTAAAAAAATCAAGCT
CAGTAACTTTTGACGAATAATAATATTAACCATATATATGCTAAATATTATGTATGTTAT
ATCACTAGATTTATATTTTAAAGTACTTTCATCTGATGCTAATTTTCATCTGATGCTAAT
TTTATATTTGTTGGGAACATAACATGGAATAAATTAATGGTCAAAGTATGTCACTGAAGA
CCATGTAGAAAAAATATAGGCTTATAATTTGGGACTAGATTTATATTTTAAAGTACTTTC
ATCTGATGCTAATTTTATATTTGTTGGAAACATAACATGGAATAAATTAATGGTCAAAGT
ATGTCACCGAAGACCATGTAGAAAAAATATAGGCTTATAATTTGGGACGGAGGGAGTATT
TGTTAAGTGACAGTTTTTTTTGTCATTAGTCACTCTTCTAAGTAGATCAACATCCAAAAC
TCACAAATTAGCAATTTAATCTGTAAAAGAACAAAAAGGTTGTACCAAGAGTATACAAGT
TTAGTCAACACACCGTACAAATTTAGTGGAACGACAACCAAGAAAAAAAATTCAGGCAAC
TACAGTGAGCAAAATCATCATATATAAAAACACGCATCCGGGTGAACTCTTAAAAAAAAA
GAACATACCAGATTAAAAGATGCACCAAAGTTGGTAAAAGATTTTGTGCAAGTCTAAACT
GCAGTTGGTCTAGGACCTCTAGGTGACTGACAAATAAGAAATTTCCTGGCAACTGATAAA
TAGCAAAACAAAAAAAAGGAATAACAGTTCTTCCACGGCATTCCAACTTCCTATTAGGCA
TGAAAACTGAATAGAGTTTAGACTATGCAAAATACATGCAAGACAAAGGGCAGATATAGC
TTGTCCAACATCCCTTCATTATTTTGTTTCTTTGGACCAGGATGGAGGATGCCGACGACG
TGCAAGACTTTCACTGCAATATTATCAGAAGCCGATCGAATAATTCTGCAGATTCCAGGG
TGAGCAAGATAGAGACATTGTTCTATGCCAACAAGGAGAGGACAGGCAGCCACATTTTGT
GCTTGGTGAAGGCTCTTCATCAGCTGGTTTGCTATGAGAGAGAGGCAGCTGGCCAACATG
AGGCTGGATATTGAACTGCACCGGCCACGGGCTTTCCGGACCAGGCCTAGCTAGTTAGCA
TGTCTGAGCCATATATGCAGACTAGTTGATATCCCGCGCTTTGCTACGAAATATGTGAAT
GAATGCATGTTATATATTATAGAAATGATAGAT

consensusID : consensus_6091#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 819
fasta sequence 
                              [ATAGAATAATAACAATATCCCTTATACATCTGAACAGACATTAGCCTCATCGAATCCTAACAAACTAACTTGACTGTGCTCAAGATCTTCGCACTTGCAGTATCTATCAACCAGGACTCCACAAGAATGTAAAACACCTATGCATCTCCAGCAAATTCGCTTTGTTCAAGCCATAACCCAAGCTACTGATCTAGAAACATTGGCCTGGCCGCCTTGCCCGTCCACTCTAAACATTGTCGCTCCATAGCGTGGTAGAGTTCTGGACATTTCATCTTCCAGACTACTCCCTCTGTCCAAAAAGTTTTTGGCTGGATGCGTCGGAGGGAGTATTGCGCTGTAGTTCTTGAGCTCCTGAGGCTTGTATGTCCTTGGGTGTGATCTGGAAGAAAAAAATGTAAGTACTCCAGAAATTGAAATACGTTTTACTGAATTCAAACTTTTAGTGGAGCCTGGCAGAAGCCCGGGAGGAGGAGACGCGGGCAATCTTATCGAATTAGTCCCAACCACCAACTTCGACATGGAAGCCATCACCACATGTAATTGCAGATAGCAGCCTCGCATCACAGCTAGCAGCAAATTCAGTCAGTCATATACATCATGATGTTGCAGGACACCGCGTCCGCCGTTGGAGCACACTGGAACATAGCCTCCGCCGCATCCACATCGCCGGCGTCAAGGTACACCTTGATCAGCGAGTTCCGCAGTTACACGTGCGAATGCAAGCCACTCACCACGACGTGGGCGTGCACCTGCTTCCCGACGGAGCGGCGCTCCGCATCCACCGACTTGAGCATCAACAGGAAGGTTTGCTCATCGGGG]

[+] EMBL CB623009             [ATAGAATAATAACAATATCCCTTATACATCTGAACAGACATTAGCCTCATCGAATCCTAACAAACTAACTTGACTGTGCTCAAGATCTTCGCACTTGCAGTATCTATCAACCAGGACTCCACAAGAATGTAAAACACCTATGCATCTCCAGCAAATTCGCTTTGTTCAAGCCATAACCCAAGCTACTGATCTAGAAACATTGGCCTGGCCGCCTTGCCCGTCCACTCTAAACATTGTCGCTCCATAGCGTGGTAGAGTTCTGGACATTTCATCTTCCAGACTACTCCCTCTGTCCAAAAAGTTTTTGGCTGGATGCGTCGGAGGGAGTATTGCGCTGTAGTTCTTGAGCTCCTGAGGCTTGTATGTCCTTGGGTGTGATCTGGAAGAAAAAAATGTAAGTACTCCAGAAATTGAAATACGTTTTACTGAATTCAAACTTTTAGTGGAGCCTGGCAGAAGCCCGGGAGGAGGAGACGCGGGCAATCTTATCGAATTAGTCCCAACCACCAACTTCGACATGGAAGCCATCACCACATGTAATTGCAGATAGCAGCCTCGCATCACAGCTAGCAGCAAATTCAGTCAGTCATATACATCATGATGTTGCAGGACACCGCGTCCGCCGTTGGAGCACACTGGAACATAGCCTCCGCCGCATCCACATCGCCGGCGTCAAGGTACACCTTGATCAGCGAGTTCCGCAGTTACACGTGCGAATGCAAGCCACTCACCACGACGTGGGCGTGCACCTGCTTCCCGACGGAGCGGCGCTCCGCATCCACCGACTTGAGCATCAACAGGAAGGTTTGCTCATCGGGG]




>consensus_6091#1
ATAGAATAATAACAATATCCCTTATACATCTGAACAGACATTAGCCTCATCGAATCCTAA
CAAACTAACTTGACTGTGCTCAAGATCTTCGCACTTGCAGTATCTATCAACCAGGACTCC
ACAAGAATGTAAAACACCTATGCATCTCCAGCAAATTCGCTTTGTTCAAGCCATAACCCA
AGCTACTGATCTAGAAACATTGGCCTGGCCGCCTTGCCCGTCCACTCTAAACATTGTCGC
TCCATAGCGTGGTAGAGTTCTGGACATTTCATCTTCCAGACTACTCCCTCTGTCCAAAAA
GTTTTTGGCTGGATGCGTCGGAGGGAGTATTGCGCTGTAGTTCTTGAGCTCCTGAGGCTT
GTATGTCCTTGGGTGTGATCTGGAAGAAAAAAATGTAAGTACTCCAGAAATTGAAATACG
TTTTACTGAATTCAAACTTTTAGTGGAGCCTGGCAGAAGCCCGGGAGGAGGAGACGCGGG
CAATCTTATCGAATTAGTCCCAACCACCAACTTCGACATGGAAGCCATCACCACATGTAA
TTGCAGATAGCAGCCTCGCATCACAGCTAGCAGCAAATTCAGTCAGTCATATACATCATG
ATGTTGCAGGACACCGCGTCCGCCGTTGGAGCACACTGGAACATAGCCTCCGCCGCATCC
ACATCGCCGGCGTCAAGGTACACCTTGATCAGCGAGTTCCGCAGTTACACGTGCGAATGC
AAGCCACTCACCACGACGTGGGCGTGCACCTGCTTCCCGACGGAGCGGCGCTCCGCATCC
ACCGACTTGAGCATCAACAGGAAGGTTTGCTCATCGGGG

consensusID : consensus_6091#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 533
fasta sequence 
                              [TCGTCGGCCGGCTGCTCTCTACATGTCGATGCTGGCGTCATCCATTCACCCCGATGAGCAAACCTTCCTGTCGCTGCTCAAGTCGGTGGATGCGGAGCGCCGCTCCGTCGGGAAGCAGGTGCACGCGCACGTGGTGGTGACTGGCCTGCATTCGCGCGTGTACCTCCGGAACTCGCTGATCAAGATGTACCTCGACGCCGGCGATGTGGAGGCGGCGGAGGCGATGTTCCGGTGTGCGCCGACGGCGGACGCGGTGTCCTGCAACATCATGCTGTCCGGGTACGTCAAGGGAGGATGCAGCGGGAAGGCGCTGCGGTTTTTCCGCGGCATGGCGTCGAGGGGGATCGGTGTTGATCAGTACACGGCTGTTGCTCTCCTCGCTTGCTGCGGGCGGCTGAAGAAGGCAGTTCTTGGTAGGTCCGTCCATGGCGTCGTCGTGCGGAGGATCGGTGTCGCGGATAGGGGATTGATCTTGAGCAATGCTCTCTTGGATATGTATGCCAAATGCGGGGAAATGAACACGGCCATGAAAG]

[+] EMBL CB640518             [TCGTCGGCCGGCTGCTCTCTACATGTCGATGCTGGCGTCATCCATTCACCCCGATGAGCAAACCTTCCTGTCGCTGCTCAAGTCGGTGGATGCGGAGCGCCGCTCCGTCGGGAAGCAGGTGCACGCGCACGTGGTGGTGACTGGCCTGCATTCGCGCGTGTACCTCCGGAACTCGCTGATCAAGATGTACCTCGACGCCGGCGATGTGGAGGCGGCGGAGGCGATGTTCCGGTGTGCGCCGACGGCGGACGCGGTGTCCTGCAACATCATGCTGTCCGGGTACGTCAAGGGAGGATGCAGCGGGAAGGCGCTGCGGTTTTTCCGCGGCATGGCGTCGAGGGGGATCGGTGTTGATCAGTACACGGCTGTTGCTCTCCTCGCTTGCTGCGGGCGGCTGAAGAAGGCAGTTCTTGGTAGGTCCGTCCATGGCGTCGTCGTGCGGAGGATCGGTGTCGCGGATAGGGGATTGATCTTGAGCAATGCTCTCTTGGATATGTATGCCAAATGCGGGGAAATGAACACGGCCATGAAAG]




>consensus_6091#2
TCGTCGGCCGGCTGCTCTCTACATGTCGATGCTGGCGTCATCCATTCACCCCGATGAGCA
AACCTTCCTGTCGCTGCTCAAGTCGGTGGATGCGGAGCGCCGCTCCGTCGGGAAGCAGGT
GCACGCGCACGTGGTGGTGACTGGCCTGCATTCGCGCGTGTACCTCCGGAACTCGCTGAT
CAAGATGTACCTCGACGCCGGCGATGTGGAGGCGGCGGAGGCGATGTTCCGGTGTGCGCC
GACGGCGGACGCGGTGTCCTGCAACATCATGCTGTCCGGGTACGTCAAGGGAGGATGCAG
CGGGAAGGCGCTGCGGTTTTTCCGCGGCATGGCGTCGAGGGGGATCGGTGTTGATCAGTA
CACGGCTGTTGCTCTCCTCGCTTGCTGCGGGCGGCTGAAGAAGGCAGTTCTTGGTAGGTC
CGTCCATGGCGTCGTCGTGCGGAGGATCGGTGTCGCGGATAGGGGATTGATCTTGAGCAA
TGCTCTCTTGGATATGTATGCCAAATGCGGGGAAATGAACACGGCCATGAAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6091#0      ATGAAGGCACCAGCGGAAAACAAGAGAGAGGGGTGGAGTGCCGCGGCACCGATGGCGCCG 60
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GCCGCTTCCCGCGGTGGATCCGACGGCGACGACGGTGCCGGCGGTTTCCCCCGGCCCGAT 120
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      --------------------ATAGAATAATAACAATATCCCTTATACATCTGAACAGACA 40
                                                                                  

consensus_6091#0      CCACCCGCGGCAACGGCTTCCCGTGGTGGATCTGACGGCGATGACGGCGGTGGCGGTTGC 180
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      TTAGCCTCATCGAATCCTAACA--AACTAACTTGACTGTGCTCAAGATCTTCGCACTTGC 98
                                                                                  

consensus_6091#0      AACAGCTACGATATACTGGGCAAGCTGCCTTCGTCACCGGGACGAGATGGTCGCCGCCGC 240
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      AGTATCTATCAACCAGGACTCCACAAGAATGTAAAACACCTATGCATCTCCAGCAAATTC 158
                                                                                  

consensus_6091#0      TGCCGATCTGAGCCCGACTCCTGGCCACCCTCGAAGCTCCTCCCCACATTGAAACTTCTA 300
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      GCTTTGTTCAAGCCATAACCCAAGCTACTGATCTAGAAACATTGGCC--TGGCCGCCTTG 216
                                                                                  

consensus_6091#0      GAAGATCCTTCATAGTCCCTCCAAGCTATTTTTATTGTCCCTTCAAGTT-CGATTCCCCC 359
consensus_6091#2      -----------------TCGTCGGCCGGCTGCTCTCTACATGTCGATGC-TGGCGTCATC 42
consensus_6091#1      CCCGTCCACTCTAAACATTGTCGCTCCATAGCGTGGTAGAGTTCTGGACATTTCATCTTC 276
                                           *   *                **            *  *

consensus_6091#0      CACAACCGATCCAAAGATCGGGTCGTCGTAGCCATTGCTGCAGCTC-CAGCTATCTCAGG 418
consensus_6091#2      CAT--TCACCCCGATGAGCAAACCTTCCT-GTCGCTGCTCAAGTCGGTGGATGCGGAGCG 99
consensus_6091#1      CAGACTACTCCCTCTGTCCAAAAAGTTTT--TGGCTGGATGCGTCGGAGGGAGTATTGCG 334
                      **        **   *  *      *  *      **     *      *         *

consensus_6091#0      CTCC--TCCAGGAGAGCCCAATCCGTGTTGCCGCTAGCT-GTGATGTGAGGCTACTATCT 475
consensus_6091#2      CCGC--TCCGTCGGGAAGCAG---GTGCACGCGCACGTG-GTGGTGACTGGC------CT 147
consensus_6091#1      CTGTAGTTCTTGAGCTCCTGAGGCTTGTATGTCCTTGGGTGTGATCTGGAAGAAAAAAAT 394
                      *     * *    *           **      *  *   *** *              *

consensus_6091#0      GCAATTACATGTGGTGATGGCTTCCATGTC---AAAATTGGTGGTTGAGGGCTAATTTGA 532
consensus_6091#2      GCATTCGCGCGTGT-----ACCTCCG-------GAACTCGCTGATCAAGATGTACCTCGA 195
consensus_6091#1      GTAAGTACTCCAGAAATTGAAATACGTTTTACTGAATTCAAACTTTTAGTGGAGCCTGGC 454
                      * *    *    *         * *         ** *      *  **       * * 

consensus_6091#0      TAATATTGCTTTGAGGACTA---ATTCAGCGTTGAGGACT--AATTCGATAATATTGCTT 587
consensus_6091#2      CGCCGGCGATGTGGAGGCGGCGGAGGCGATGTTCCGGTGT--GCGCCGACGGCGG-ACGC 252
consensus_6091#1      AGAAGCCCGGGAGGAGGAGACGCGGGCAATCTTATCGAATTAGTCCCAACCACCA-ACTT 513
                                  *  *          *    **   *  *      * *        *  

consensus_6091#0      CATCCCACATAATGTCGTG-TATACTGAAATATTCAGCGATATCGCGA-ATCAACGTGCT 645
consensus_6091#2      GGTGTCCTGCAACATCATGCTGTCCGGGTACGTCAAGGGAGGATGCAGCGGGAAGGCGCT 312
consensus_6091#1      CGACATGGAAGCCATCACCACATGTAATTGCAGATAGCAGCCTCGCATCACAGCTAGCAG 573
                                    **      *            **       **              

consensus_6091#0      TAATTTTACCAGAT--TGTAGTGCATGGTGCCCAAAATCATCAA-ATTGAGAGATATATG 702
consensus_6091#2      GCGGTTT------T--TCCGCGGCATGGCGTCGAGGGGGATCGGTGTTGATCAGTACACG 364
consensus_6091#1      CAAATTCAGTCAGTCATATACATCATGATGTTGCAGGACACCGC-GTCCGCCGTTGGAGC 632
                          **       *  *      ****  *         * *    *       *  *  

consensus_6091#0      ATG-TGTTATGCTTCTTCCGTGTGGTTGTATGTTCCCACTGTAGTGTGCAGTTCTT--CA 759
consensus_6091#2      GC--TGTTGCTCTCCTCGCTTGCTGCGG------GCGGCTGAAGAAGGCAGTTCTTGGTA 416
consensus_6091#1      ACACTGGAACATAGCCTCCGCCGCATCCACATCGCCGGCGTCAAGGTACA--CCTTGATC 690
                          **        *   *                *  *   *     **   ***    

consensus_6091#0      CCTAAATACAAAGGTTGATCAAGTTGTTTATTGGTGCCATCTATTTGTTGTTATCCTGGT 819
consensus_6091#2      GGTCCGTCCATGGCGTCGTCGTGCGGAGGATCGGTGTCGCGGATAGGGGATTGATCTTGA 476
consensus_6091#1      AGCGAGTTCCGCAGTTACACGTGCGA---ATGCAAGCCACTCACCACGACGTGGGCGTGC 747
                            * *      *   *  *      **    * *    *        *   *  * 

consensus_6091#0      AGTCTACTATCGATGCAAAG-T-TGCAAACGACAACCAAACCCAGAGGCTGACCATTATC 877
consensus_6091#2      GCAATGCTCTCTTGGATATG-TATGCCAAATGCGGGGAAAT---GAACACGGCCATGAAA 532
consensus_6091#1      ACCTGCTTCCCGACGGAGCGGCGCTCCGCATCCACCGACTT---GAGCATCAACAGGAAG 804
                             *  *   *    *     *      *    *      **       **  *  

consensus_6091#0      ATTTCCTTTCCTTCATTCAGTTACAATGCTACAAACTTTTCCATGTTTGTTGTTGTGCGT 937
consensus_6091#2      G----------------------------------------------------------- 533
consensus_6091#1      GTTTGCTCATCGGGG--------------------------------------------- 819
                                                                                  

consensus_6091#0      ACCTCTATATGTAATGCACTATGCAAAATCATTAGGTTGTATATGCTACCACCAATATGC 997
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      ACACACTTGGTCTTTGATGATGTTCTTATGCCTATGATGTACCGTATTTGTTAATGTGTG 1057
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      TATTGAGATGCTGCAGTTCCTGTTCATTTGCCAATATTATTGACACGCCGTATGCATTAG 1117
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      TAAACTAATATGCTATTAGCAATGTTCAGGGCTTCAGGCACATCTAATTTGCTATCTTTT 1177
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      ACTCCTATACGTTTGCAATGTTTAGATTATCCACACAATTCTTATTTTACCAAAATATTG 1237
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      TATTGTATTTGTTGATGTCTCTTCATCCTTTAGTTTTTTTATGCTTTTTATTGGGTCCGC 1297
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GGCAAAGGCCGCGGGGGGTACGACCTAGTTACAATGATGGAGCTAGCGAACAGGCGATGA 1357
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      ACAGGTACGGTAGAGCATTATAGCCTAACTAGTTTCACTTCTTTTTATTTCTTAAGTTCG 1417
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      TTGTTCATCATTTAACTCTTTGTTTGGTTTAGCTTTAATCATTTAATTTGAATTAATCTT 1477
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GTCTCTTCCATCAGTTCAATTAGCCCAAGATTAGGGTGGCTATACCACCAATCAGTGGTG 1537
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      CTCATCAAATAGACTTAGAGAGTGACCATCTACTCCCTCAGTCCCAAATTATAGGGCAAC 1597
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      TTCTTTTTTAAAAAAATCAAGCTCAGTAACTTTTGACGAATAATAATATTAACCATATAT 1657
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      ATGCTAAATATTATGTATGTTATATCACTAGATTTATATTTTAAAGTACTTTCATCTGAT 1717
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GCTAATTTTCATCTGATGCTAATTTTATATTTGTTGGGAACATAACATGGAATAAATTAA 1777
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      TGGTCAAAGTATGTCACTGAAGACCATGTAGAAAAAATATAGGCTTATAATTTGGGACTA 1837
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GATTTATATTTTAAAGTACTTTCATCTGATGCTAATTTTATATTTGTTGGAAACATAACA 1897
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      TGGAATAAATTAATGGTCAAAGTATGTCACCGAAGACCATGTAGAAAAAATATAGGCTTA 1957
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      TAATTTGGGACGGAGGGAGTATTTGTTAAGTGACAGTTTTTTTTGTCATTAGTCACTCTT 2017
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      CTAAGTAGATCAACATCCAAAACTCACAAATTAGCAATTTAATCTGTAAAAGAACAAAAA 2077
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GGTTGTACCAAGAGTATACAAGTTTAGTCAACACACCGTACAAATTTAGTGGAACGACAA 2137
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      CCAAGAAAAAAAATTCAGGCAACTACAGTGAGCAAAATCATCATATATAAAAACACGCAT 2197
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      CCGGGTGAACTCTTAAAAAAAAAGAACATACCAGATTAAAAGATGCACCAAAGTTGGTAA 2257
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      AAGATTTTGTGCAAGTCTAAACTGCAGTTGGTCTAGGACCTCTAGGTGACTGACAAATAA 2317
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GAAATTTCCTGGCAACTGATAAATAGCAAAACAAAAAAAAGGAATAACAGTTCTTCCACG 2377
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GCATTCCAACTTCCTATTAGGCATGAAAACTGAATAGAGTTTAGACTATGCAAAATACAT 2437
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GCAAGACAAAGGGCAGATATAGCTTGTCCAACATCCCTTCATTATTTTGTTTCTTTGGAC 2497
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      CAGGATGGAGGATGCCGACGACGTGCAAGACTTTCACTGCAATATTATCAGAAGCCGATC 2557
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GAATAATTCTGCAGATTCCAGGGTGAGCAAGATAGAGACATTGTTCTATGCCAACAAGGA 2617
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GAGGACAGGCAGCCACATTTTGTGCTTGGTGAAGGCTCTTCATCAGCTGGTTTGCTATGA 2677
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GAGAGAGGCAGCTGGCCAACATGAGGCTGGATATTGAACTGCACCGGCCACGGGCTTTCC 2737
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GGACCAGGCCTAGCTAGTTAGCATGTCTGAGCCATATATGCAGACTAGTTGATATCCCGC 2797
consensus_6091#2      ------------------------------------------------------------
consensus_6091#1      ------------------------------------------------------------
                                                                                  

consensus_6091#0      GCTTTGCTACGAAATATGTGAATGAATGCATGTTATATATTATAGAAATGATAGAT 2853
consensus_6091#2      --------------------------------------------------------
consensus_6091#1      --------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)