cluster # 6106

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Oryza sativa
cluster # 6106 cluster # 6106 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6106#0 length = 1547 sequences # 4
consensusID : consensus_6106#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1547
fasta sequence
                              [CAAACCAAGCAAACTCCATCTCATCGTCGCTCCGGTCCCCACCCTACTCCACCAACTCCCGCCGCCGCCGCCGCCGGCGGTCGTGCGCTCCGGGCCGCAGCCATGCACGGCCGCCGCCACCTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACCCCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACCGCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGACTTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATGAAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCGGGAGCTGAAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCGGCGAGTGCTGGTCCGGCGGCGAGACCGGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCGGCTGCAGGTTTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCAGATCCTGATGAACCTTCTAATGTTGCTCAAGCTATTGCCTCGTGGGGCCTGGAGTATATTGTCATCACAAGTGTTGACCGCGATGATTTACCTGATCAAGGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTAAAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGTTCCTGATTTCCGTGGAGACCCAGCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACAGTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGATGTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATGCTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGACGGAAAAGGTTAGGGCTGCTGGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTTTCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGGCTTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACAAAGCTGGTGAGTTCTACATAAAAGCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGATCCTCTTTCCTTGACATTGTTACACTGCAAAT-AAAGTCGCAGGATTCTAAAAGTTCTTATTGGAAAAACATGTTCATTTTTGTCATAATTGCAATCGTGCTCCTTTCAACTTCTCACTGCCCCTTGTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTATAATGTAAAAATCACGAGTCCCTGTGGTCCAGTTGTCAATCATTCATTCATTGCTGTAAACTTCAAC-AGTAGCAGGAAGTCAAGTCAAACTACCCACTGAAAATGTAGATAT]

[+] EMBL AK120652             [CAAACCAAGCAAACTCCATCTCATCGTCGCTCCGGTCCCCACCCTACTCCACCAACTCCCGCCGCCGCCGCCGCCGGCGGTCGTGCGCTCCGGGCCGCAGCCATGCACGGCCGCCGCCACCTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACCCCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACCGCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGACTTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATGAAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCGGGAGCTGAAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCGGCGAGTGCTGGTCCGGCGGCGAGACCGGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCGGCTGCAGGTTTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCAGATCCTGATGAACCTTCTAATGTTGCTCAAGCTATTGCCTCGTGGGGCCTGGAGTATATTGTCATCACAAGTGTTGACCGCGATGATTTACCTGATCAAGGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTAAAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGTTCCTGATTTCCGTGGAGACCCAGCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACAGTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGATGTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATGCTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGACGGAAAAGGTTAGGGCTGCTGGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTTTCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGGCTTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACAAAGCTGGTGAGTTCTACATAAAAGCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGATCCTCTTTCCTTGACATTGTTACACTGCAAAT AAAGTCGCAGGATTCTAAAAGTTCTTATTGGAAAAACATGTTCATTTTTGTCATAATTGCAATCGTGCTCCTTTCAACTTCTCACTGCCCCTTGTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTATAATGTAAAAATCACGAGTCCCTGTGGTCCAGTTGTCAATCATTCATTCATTGCTGTAAACTTCAAC AGTAGCAGGAAGTCAAGTCAAA                       ]
[+] EMBL CB642840             [                          TCGCCCCTGACCCCACCCTACTCCACCAACTCCCGCCGCCGCCGCCGCCGGCGGTCGTGCGCTCCGGGCCGCAGCCATGCACGGCCGCCGCCACCTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACCCCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACCGCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGACTTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATGAAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCAGGAGCTGAAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCAGCGAGTGCTGGTCCGGCGAGAAGACCAGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCAGCTGCAGGATTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCgcat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB642841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTAAAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGTTCCTGATTTCCGTGGAGACCCAGCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACAGTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGATGTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATGCTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGACGGAAAAGGTTAGGGCTGCTGGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTTTCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGGCTTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACAAAGCTGGTGAGTTCTACATAAAAGCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGATCCTCTTTCCTTGACATTGTTACACTGCAAAT AAAGTCGCAGGATTCTAAAAGTTCTTATTGGAAAAACATGTTCATTTTTGTCATAATTGCAATCGTGCTCCTTTCAACTTCTCACTGCCCCTTGTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTTTAAAGGGAAAATCACGAGTCCCT                                                                                          ]
[+] EMBL AA753210             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCTACATAAAANCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGACCCTCTNNCCTTGACATTGTTACACTGCAAATGGGAGTCGCAGGATTCTAAAAGTTCTTATTGGAAAAACATGTTCATTTCTGTCATAATTGCAATCGTGCCCCTTTCAACTTCTCACTGCCCCTTGTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTATAATGTAAAAATCACGAATCCCTGTGGTCCAGTTGTCAATCATTCATTCATTGCTGTAAACTTCAACAAGTANCAGGAAATCAAGTCAAACTACCCACTGAAAATGTAGATAT]




>consensus_6106#0
CAAACCAAGCAAACTCCATCTCATCGTCGCTCCGGTCCCCACCCTACTCCACCAACTCCC
GCCGCCGCCGCCGCCGGCGGTCGTGCGCTCCGGGCCGCAGCCATGCACGGCCGCCGCCAC
CTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACC
CCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACC
GCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGAC
TTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATG
AAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCGGGAGCTG
AAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCGGCGAGTGCTGGTCCGGC
GGCGAGACCGGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCGGC
TGCAGGTTTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCAGATCCTGATGAACCT
TCTAATGTTGCTCAAGCTATTGCCTCGTGGGGCCTGGAGTATATTGTCATCACAAGTGTT
GACCGCGATGATTTACCTGATCAAGGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTA
AAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGTTCCTGATTTCCGTGGAGACCCA
GCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACA
GTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGAT
GTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATG
CTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGACGGAAAAGGTTAGGGCTGCT
GGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTT
TCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGGC
TTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACAAAGCTGGTGAGTTCTAC
ATAAAAGCCATGATTGAAGCTGACAGAGCAAAAGCTACGACTGCAATATAGTTGATCCTC
TTTCCTTGACATTGTTACACTGCAAATAAAGTCGCAGGATTCTAAAAGTTCTTATTGGAA
AAACATGTTCATTTTTGTCATAATTGCAATCGTGCTCCTTTCAACTTCTCACTGCCCCTT
GTACCATTTCAACATCTCCAAGCTATGTTTGAAATTGTTGCTCTCTTTTGTTTTATAATG
TAAAAATCACGAGTCCCTGTGGTCCAGTTGTCAATCATTCATTCATTGCTGTAAACTTCA
ACAGTAGCAGGAAGTCAAGTCAAACTACCCACTGAAAATGTAGATAT
clustalw multiple alignements is not computed in this case