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Oryza sativa
cluster # 6108 cluster # 6108       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6108#0 length = 1960 sequences # 3  
consensus_6108#1 length = 695 sequences # 1  

consensusID : consensus_6108#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1960
fasta sequence
                              [CAGCTGCTCGGTTCGCAGCTGCAGCTTCAGCTTCAGTTGCTATCTGCTGGCTGGCTCATCAGCTCCAAGAACACAGTAACAGAGGAGAGTGCTTAGCATAAATTAGCGGCAGTTCCGAGGCCAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGAGAGATCCGAGGCTGCGAGCTGGGAGAGCTCTCTGCTACTCC---------CAGGTCCAAGAGGTGCATCAAGAAGTTGCCCTTCCTGTAGCACCATCTATCATCAATGATGTTGGACAGAAGATGGCGGGGAACCATACTTTTGCTCATCTGTCTTGTCTGCAATGCATCAGGGACTTATGTTGGCGCCAACACGATCCCTTCGCCGGAGAACTCGCCGTCGGAGTTCGCCAAGATTGTTCAGTCTAAGCAGACGAAGCATGCGCGCGTGTTCATCGGCGGCGGGGACCATCGGTCGCTGCGATCGCTGGCGAACACCGGCGAGG-AGGTGATCCTCACCGTGCCCAACGACCAGCTCGAGCACATGGCCGAGTTCCCGGAGGAGGCCGAGCTCTGGGTCGCCGCCAACGTCGCGCGGTTCCTCCCGGCGACGAGGATCACGCACGTGGTGGCCGGCGACGACGTTGTGGCCAGGTCACCGGGGAACGCGTACTTCCTCCTCCCGGCGATGGCCAACCTCCACGCCGCGCTCGCCGCGTCGCGCCTCGACGGCCGCGTGAAGGTGTCGAGCGCGGTGTCCGGCGCCGCGCTGCAGGCTCCCCCGGCGTGGGCCGCCGCCGCCGTGGCGGGCGGCCTCCTCCGGTTCCTGAACGCCACCGGCGCGCCGCTGTTCCTCAAGACCCGGCCGTCGGAGTCCACGGACACCATGGTCGACGCGGCCTACGGCGCGATGCGCGCGCTGGGGTTCCCCGGGGGCGCCATCCCGGTGATCGCGGCGCCGGTGGAGACAGAAGAATTCGGCGGTGGCGCGACGACGGTGGTGTACCACAGCTACCTGCTGCAGGCCTCCGGCGGCGTCGGCGGCGGCGAGAGGCGGTCGCTGGCGACGTCGGCGGGGATGTTCTGCGTGGCGCTGCAGAACGCGGACGCGGCGGCGCTGCAGGCGGGGCTGAACTGGGCGTGCGGGCCCGGGCAGGCGGACTGCGCGGCGATCCAGCCCGGCGGCGCGTGCTACAAGCAGAACAACCTGCCGGCGCTGGCGTCCTACGCCTACAACGACTACTACCAGAAGATGGCGTCCACCGGCGCCACCTGCTCCTTCAATGGCACCGCCACCACCACCACCGCCGATCCCAGCTCAGGATCATGCGTCTTCACAGGAAGCTCGATGGCAGGAGGCTCGAACACGAGCGTGCCGGGAGCCAGCCCTCCGACGACGCTCTCCCCACCGGCGGGCCTCACGCCGCCGGTCGGCACCAGCCCACCGACCGACTTCAGCCCGCCGGCGGCCGGCACGACCCCTCCGGCCGGCGGCTTCACCCCGCCGGCGGGCGGCTTCGGCACCCCGCCGCTGGGCGGGTTCGGCACGCCGCCGTCGGGGTTCGGCCCGCCGGGGAGCTTCAACGGGAGCGGCTCGTCGTTCGGGCCCAGCAGCGCCTTCAGCCCGTACGGCGGCGCCGGCCACCGCGACGGCGGCGCCTCCGGCGCTCGCCTCGCCGCCGCTGCCCTCGCCGTGCTGCTCCTGTCCGTCGATCTCATGTGAAGTTCGTTTCTATTTGTGTAAATTTGGGAATCATGCGTTGTGATGTTGCTCTGAGAAATTGCTGGTCTCTGTAGGCGGCGGATTGAAATTATGCATACGAAAAATTAGGAGTTTATATATATATATGTAATTATGCATGTATAGTATATATACTTGATCAGCATGGACATTATCTAAAAAAATATGTGCTAGTCAGTCGCTGACAATTTCTGTTCTTCGACCTGTCAGTTAATGGTTATACATGTACATGCCACTAGCCTCACGCATGGTTGA]

[+] EMBL AK120709             [   CTGCTCGGTTCGCAGCTGCAGCTTCAGCTTCAGTTGCTATCTGCTGGCTGGCTCATCAGCTCCAAGAACACAGTAACAGAGGAGAGTGCTTAGCATAAATTAGCGGCAGTTCCGAGGCCAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGAGAGATCCGAGGCTGCGAGCTGGGAGAGCTCTCTGCTACTCC         CAGGTCCAAGAGGTGCATCAAGAAGTTGCCCTTCCTGTAGCACCATCTATCATCAATGATGTTGGACAGAAGATGGCGGGGAACCATACTTTTGCTCATCTGTCTTGTCTGCAATGCATCAGGGACTTATGTTGGCGCCAACACGATCCCTTCGCCGGAGAACTCGCCGTCGGAGTTCGCCAAGATTGTTCAGTCTAAGCAGACGAAGCATGCGCGCGTGTTCATCGGCGGCGGGGACCATCGGTCGCTGCGATCGCTGGCGAACACCGGCGAGG AGGTGATCCTCACCGTGCCCAACGACCAGCTCGAGCACATGGCCGAGTTCCCGGAGGAGGCCGAGCTCTGGGTCGCCGCCAACGTCGCGCGGTTCCTCCCGGCGACGAGGATCACGCACGTGGTGGCCGGCGACGACGTTGTGGCCAGGTCACCGGGGAACGCGTACTTCCTCCTCCCGGCGATGGCCAACCTCCACGCCGCGCTCGCCGCGTCGCGCCTCGACGGCCGCGTGAAGGTGTCGAGCGCGGTGTCCGGCGCCGCGCTGCAGGCTCCCCCGGCGTGGGCCGCCGCCGCCGTGGCGGGCGGCCTCCTCCGGTTCCTGAACGCCACCGGCGCGCCGCTGTTCCTCAAGACCCGGCCGTCGGAGTCCACGGACACCATGGTCGACGCGGCCTACGGCGCGATGCGCGCGCTGGGGTTCCCCGGGGGCGCCATCCCGGTGATCGCGGCGCCGGTGGAGACAGAAGAATTCGGCGGTGGCGCGACGACGGTGGTGTACCACAGCTACCTGCTGCAGGCCTCCGGCGGCGTCGGCGGCGGCGAGAGGCGGTCGCTGGCGACGTCGGCGGGGATGTTCTGCGTGGCGCTGCAGAACGCGGACGCGGCGGCGCTGCAGGCGGGGCTGAACTGGGCGTGCGGGCCCGGGCAGGCGGACTGCGCGGCGATCCAGCCCGGCGGCGCGTGCTACAAGCAGAACAACCTGCCGGCGCTGGCGTCCTACGCCTACAACGACTACTACCAGAAGATGGCGTCCACCGGCGCCACCTGCTCCTTCAATGGCACCGCCACCACCACCACCGCCGATCCCAGCTCAGGATCATGCGTCTTCACAGGAAGCTCGATGGCAGGAGGCTCGAACACGAGCGTGCCGGGAGCCAGCCCTCCGACGACGCTCTCCCCACCGGCGGGCCTCACGCCGCCGGTCGGCACCAGCCCACCGACCGACTTCAGCCCGCCGGCGGCCGGCACGACCCCTCCGGCCGGCGGCTTCACCCCGCCGGCGGGCGGCTTCGGCACCCCGCCGCTGGGCGGGTTCGGCACGCCGCCGTCGGGGTTCGGCCCGCCGGGGAGCTTCAACGGGAGCGGCTCGTCGTTCGGGCCCAGCAGCGCCTTCAGCCCGTACGGCGGCGCCGGCCACCGCGACGGCGGCGCCTCCGGCGCTCGCCTCGCCGCCGCTGCCCTCGCCGTGCTGCTCCTGTCCGTCGATCTCATGTGAAGTTCGTTTCTATTTGTGTAAATTTGGGAATCATGCGTTGTGATGTTGCTCTGAGAAATTGCTGGTCTCTGTAGGCGGCGGATTGAAATTATGCATACGAAAAATTAGGAGTTTATATATATATATGTAATTATGCATGTATAGTATATATACTTGATCAGCATGGACATTATCTAAAAAAATATGTGCTAGTCAGTCGCTGACAATTTCTGTTCTTCGACCTGTCAGTTAATGGTTATACATGTACATGCCACTAGCCTCACGCATGGTTGA]
[+] EMBL CA756513             [caggaatTCGGCACG AGCTGCAGCTTCAGCTTCAGTTGCTATCTGCTGGCTGGCTCATCAGCGGCAAGAACACAGTAACAGAGGAGAGTGCTTAGCATAAATTAGCGGCAGTTCCGAGGCCAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGAGAGATCCGAGGCTGCGAGCTGGGAGAGCTCTCTGCTACTCCCAGGTTCAACAGGTCCAAGAGGTGCATCAAGAAGTTGCCCTTCCTGTAGCACCATCTATCATCAATGATGTTGGACAGAAGATGGCGGGGAACCATACTTTTGCTCATCTGTCTTGTCTGCAATGCATCAGGGACTTATGTTGGCGCCAACACGATCCCTTCGCCGGAGAACTCGCCGTCGGAGTTCGCCAAGATTGTTCAGTCTAAGCAGACGAAGCATGCGCGCGTGTTCATCGGCGGGGGGGACCATCGGTCGCTGCGATCGCTGGCGAACACCGGCGAGGAAGGTGATCCTCACCGTGCCCAACGACCAGCTCGAGCACATGGGCCAGTTCCCGGAGGAGGGCGAGCTTTTGGTCGCCG CAACcttggc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK110542             [                                                                                                                                                                                                                                                                                                                                                                                                                             ATGCGCGCGTGTTCATCGGCGGCGGGGACCATCGGTCGCTGCGATCGCTGGCGAACACCGGCGAGG AGGTGATCCTCACCGTGCCCAACGACCAGCTCGAGCACATGGCCGAGTTCCCGGAGGAGGCCGAGCTCTGGGTCGCCGCCAACGTCGCGCGGTTCCTCCCGGCGACGAGGATCACGCACGTGGTGGCCGGCGACGACGTTGTGGCCAGGTCACCGGGGAACGCGTACTTCCTCCTCCCGGCGATGGCCAACCTCCACGCCGCGCTCGCCGCGTCGCGCCTCGACGGCCGCGTGAAGGTGTCGAGCGCGGTGTCCGGCGCCGCGCTGCAGGCTCCCCCGGCGTGGGCCGCCGCCGCCGTGGCGGGCGGCCTCCTCCGGTTCCTGAACGCCACCGGCGCGCCGCTGTTCCTCAAGACCCGGCCGTCGGAGTCCACGGACACCATGGTCGACGCGGCCTACGGCGCGATGCGCGCGCTGGGGTTCCCCGGGGGCGCCATCCCGGTGATCGCGGCGCCGGTGGAGACAGAAGAATTCGGCGGTGGCGCGACGACGGTGGTGTACCACAGCTACCTGCTGCAGGCCTCCGGCGGCGTCGGCGGCGGCGAGAGGCGGTCGCTGGCGACGTCGGCGGGGATGTTCTGCGTGGCGCTGCAGAACGCGGACGCGGCGGCGCTGCAGGCGGGGCTGAACTGGGCGTGCGGGCCCGGGCAGGCGGACTGCGCGGCGATCCAGCCCGGCGGCGCGTGCTACAAGCAGAACAACCTGCCGGCGCTGGCGTCCTACGCCTACAACGACTACTACCAGAAGATGGCGTCCACCGGCGCCACCTGCTCCTTCAATGGCACCGCCACCACCACCACCGCCGATCCCAGCTCAGGATCATGCGTCTTCACAGGAAGCTCGATGGCAGGAGGCTCGAACACGAGCGTGCCGGGAGCCAGCCCTCCGACGACGCTCTCCCCACCGGCGGGCCTCACGCCGCCGGTCGGCACCAGCCCACCGACCGACTTCAGCCCGCCGGCGGCCGGCACGACCCCTCCGGCCGGCGGCTTCACCCCGCCGGCGGGCGGCTTCGGCACCCCGCCGCTGGGCGGGTTCGGCACGCCGCCGTCGGGGTTCGGCCCGCCGGGGAGCTTCAACGGGAGCGGCTCGTCGTTCGGGCCCAGCAGCGCCTTCAGCCCGTACGGCGGCGCCGGCCACCGCGACGGCGGCGCCTCCGGCGCTCGCCTCGCCGCCGCTGCCCTCGCCGTGCTGCTCCTGTCCGTCGATCTCATGTGAAGTTCGTTTCTATTTGTGTAAATTTGGGAATCATGCGTTGTGATGTTGCTCTGAGAAATTGCTGGTCTCTGTAGGCGGCGGATTGAAATTATGCATACGAAAAATTAGGAGTTTATATATATATATGTAATTATGCATGTATAGTATATATACTTGATCAGCATG                                                                                                            ]


>consensus_6108#0 CAGCTGCTCGGTTCGCAGCTGCAGCTTCAGCTTCAGTTGCTATCTGCTGGCTGGCTCATC AGCTCCAAGAACACAGTAACAGAGGAGAGTGCTTAGCATAAATTAGCGGCAGTTCCGAGG CCAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGAGAGATCCGAGGCTGCGAGCTGGGAGA GCTCTCTGCTACTCCCAGGTCCAAGAGGTGCATCAAGAAGTTGCCCTTCCTGTAGCACCA TCTATCATCAATGATGTTGGACAGAAGATGGCGGGGAACCATACTTTTGCTCATCTGTCT TGTCTGCAATGCATCAGGGACTTATGTTGGCGCCAACACGATCCCTTCGCCGGAGAACTC GCCGTCGGAGTTCGCCAAGATTGTTCAGTCTAAGCAGACGAAGCATGCGCGCGTGTTCAT CGGCGGCGGGGACCATCGGTCGCTGCGATCGCTGGCGAACACCGGCGAGGAGGTGATCCT CACCGTGCCCAACGACCAGCTCGAGCACATGGCCGAGTTCCCGGAGGAGGCCGAGCTCTG GGTCGCCGCCAACGTCGCGCGGTTCCTCCCGGCGACGAGGATCACGCACGTGGTGGCCGG CGACGACGTTGTGGCCAGGTCACCGGGGAACGCGTACTTCCTCCTCCCGGCGATGGCCAA CCTCCACGCCGCGCTCGCCGCGTCGCGCCTCGACGGCCGCGTGAAGGTGTCGAGCGCGGT GTCCGGCGCCGCGCTGCAGGCTCCCCCGGCGTGGGCCGCCGCCGCCGTGGCGGGCGGCCT CCTCCGGTTCCTGAACGCCACCGGCGCGCCGCTGTTCCTCAAGACCCGGCCGTCGGAGTC CACGGACACCATGGTCGACGCGGCCTACGGCGCGATGCGCGCGCTGGGGTTCCCCGGGGG CGCCATCCCGGTGATCGCGGCGCCGGTGGAGACAGAAGAATTCGGCGGTGGCGCGACGAC GGTGGTGTACCACAGCTACCTGCTGCAGGCCTCCGGCGGCGTCGGCGGCGGCGAGAGGCG GTCGCTGGCGACGTCGGCGGGGATGTTCTGCGTGGCGCTGCAGAACGCGGACGCGGCGGC GCTGCAGGCGGGGCTGAACTGGGCGTGCGGGCCCGGGCAGGCGGACTGCGCGGCGATCCA GCCCGGCGGCGCGTGCTACAAGCAGAACAACCTGCCGGCGCTGGCGTCCTACGCCTACAA CGACTACTACCAGAAGATGGCGTCCACCGGCGCCACCTGCTCCTTCAATGGCACCGCCAC CACCACCACCGCCGATCCCAGCTCAGGATCATGCGTCTTCACAGGAAGCTCGATGGCAGG AGGCTCGAACACGAGCGTGCCGGGAGCCAGCCCTCCGACGACGCTCTCCCCACCGGCGGG CCTCACGCCGCCGGTCGGCACCAGCCCACCGACCGACTTCAGCCCGCCGGCGGCCGGCAC GACCCCTCCGGCCGGCGGCTTCACCCCGCCGGCGGGCGGCTTCGGCACCCCGCCGCTGGG CGGGTTCGGCACGCCGCCGTCGGGGTTCGGCCCGCCGGGGAGCTTCAACGGGAGCGGCTC GTCGTTCGGGCCCAGCAGCGCCTTCAGCCCGTACGGCGGCGCCGGCCACCGCGACGGCGG CGCCTCCGGCGCTCGCCTCGCCGCCGCTGCCCTCGCCGTGCTGCTCCTGTCCGTCGATCT CATGTGAAGTTCGTTTCTATTTGTGTAAATTTGGGAATCATGCGTTGTGATGTTGCTCTG AGAAATTGCTGGTCTCTGTAGGCGGCGGATTGAAATTATGCATACGAAAAATTAGGAGTT TATATATATATATGTAATTATGCATGTATAGTATATATACTTGATCAGCATGGACATTAT CTAAAAAAATATGTGCTAGTCAGTCGCTGACAATTTCTGTTCTTCGACCTGTCAGTTAAT GGTTATACATGTACATGCCACTAGCCTCACGCATGGTTGA



consensusID : consensus_6108#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence
                              [CAGTCGCCTTGCCATCACTTTGCTCCTCCCTGCTCGGTTTGCAGCTGCAGCTTCAGCTTCAGTTGCTATTTGCTGGCTGGCTCATCAGCTCCAAGAACCCAGTAACAGAGGAGAGTGCTTAGCATAAATTAGCGGCAGTTCCGAGGCTAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGAGAGATCCGAGGCTGCGAGCTGGGAGAGCTCTTTGCTACTCCCAGGTACATACAGCCGTCAGTGAAATTCCAGTTGTTGCAGCATGAAATCATTCGTTCGTTCATGGTGATTTACTCTGTTGGTTCTGCTTCTTGTTTCTGTTCCTCTCGATCGTCGGGTAATCGATCGTGTTGCCCGGTTTCTGTACTGCTATTTGCTGAATTATACTAGTTCATCCTCGTTATGCCAGCGTTGTTAATTCTTATCAGTATGATCTAACCTTTTCTCAATTTCAAATTTATTGCGCTTCATTTCTCCTATCAATTAGCTGGCTACTTCATGTGCGATATTCATATTCTGTCAGTCAAAGCGTTTAATTTGGAGCGATTTTATTTTCCCTGTAAAAATCCTTGTAGAGCTTTGCATGGGATTCTCGCATACCCAATAGGCTACTTGAATTTGAGTTGTCCGTATTACTGTTACTCCCCCCAATTTAAACTTTATGTATATTTCTAGCTGGAAAAAAAAAAAAAAAA]

[-] EMBL CA761937             [CAGTCGCCTTGCCATCACTTTGCTCCTCCCTGCTCGGTTTGCAGCTGCAGCTTCAGCTTCAGTTGCTATTTGCTGGCTGGCTCATCAGCTCCAAGAACCCAGTAACAGAGGAGAGTGCTTAGCATAAATTAGCGGCAGTTCCGAGGCTAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGAGAGATCCGAGGCTGCGAGCTGGGAGAGCTCTTTGCTACTCCCAGGTACATACAGCCGTCAGTGAAATTCCAGTTGTTGCAGCATGAAATCATTCGTTCGTTCATGGTGATTTACTCTGTTGGTTCTGCTTCTTGTTTCTGTTCCTCTCGATCGTCGGGTAATCGATCGTGTTGCCCGGTTTCTGTACTGCTATTTGCTGAATTATACTAGTTCATCCTCGTTATGCCAGCGTTGTTAATTCTTATCAGTATGATCTAACCTTTTCTCAATTTCAAATTTATTGCGCTTCATTTCTCCTATCAATTAGCTGGCTACTTCATGTGCGATATTCATATTCTGTCAGTCAAAGCGTTTAATTTGGAGCGATTTTATTTTCCCTGTAAAAATCCTTGTAGAGCTTTGCATGGGATTCTCGCATACCCAATAGGCTACTTGAATTTGAGTTGTCCGTATTACTGTTACTCCCCCCAATTTAAACTTTATGTATATTTCTAGCTGGAAAAAAAAAAAAAAAA]


>consensus_6108#1 CAGTCGCCTTGCCATCACTTTGCTCCTCCCTGCTCGGTTTGCAGCTGCAGCTTCAGCTTC AGTTGCTATTTGCTGGCTGGCTCATCAGCTCCAAGAACCCAGTAACAGAGGAGAGTGCTT AGCATAAATTAGCGGCAGTTCCGAGGCTAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGA GAGATCCGAGGCTGCGAGCTGGGAGAGCTCTTTGCTACTCCCAGGTACATACAGCCGTCA GTGAAATTCCAGTTGTTGCAGCATGAAATCATTCGTTCGTTCATGGTGATTTACTCTGTT GGTTCTGCTTCTTGTTTCTGTTCCTCTCGATCGTCGGGTAATCGATCGTGTTGCCCGGTT TCTGTACTGCTATTTGCTGAATTATACTAGTTCATCCTCGTTATGCCAGCGTTGTTAATT CTTATCAGTATGATCTAACCTTTTCTCAATTTCAAATTTATTGCGCTTCATTTCTCCTAT CAATTAGCTGGCTACTTCATGTGCGATATTCATATTCTGTCAGTCAAAGCGTTTAATTTG GAGCGATTTTATTTTCCCTGTAAAAATCCTTGTAGAGCTTTGCATGGGATTCTCGCATAC CCAATAGGCTACTTGAATTTGAGTTGTCCGTATTACTGTTACTCCCCCCAATTTAAACTT TATGTATATTTCTAGCTGGAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6108#0      --------------------------CAGCTGCTCGGTTCGCAGCTGCAGCTTCAGCTTC 34
consensus_6108#1      CAGTCGCCTTGCCATCACTTTGCTCCTCCCTGCTCGGTTTGCAGCTGCAGCTTCAGCTTC 60
                                                   ********** ********************

consensus_6108#0      AGTTGCTATCTGCTGGCTGGCTCATCAGCTCCAAGAACACAGTAACAGAGGAGAGTGCTT 94
consensus_6108#1      AGTTGCTATTTGCTGGCTGGCTCATCAGCTCCAAGAACCCAGTAACAGAGGAGAGTGCTT 120
                      ********* **************************** *********************

consensus_6108#0      AGCATAAATTAGCGGCAGTTCCGAGGCCAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGA 154
consensus_6108#1      AGCATAAATTAGCGGCAGTTCCGAGGCTAGGCTTTTCGTCCGGGCGAAGCGAAACGAGGA 180
                      *************************** ********************************

consensus_6108#0      GAGATCCGAGGCTGCGAGCTGGGAGAGCTCTCTGCTACTCCCAGGTCCAAGAGGTGCATC 214
consensus_6108#1      GAGATCCGAGGCTGCGAGCTGGGAGAGCTCTTTGCTACTCCCAGGTACATACAGC-CGTC 239
                      ******************************* ************** **    *  * **

consensus_6108#0      AA-GAAGTTGCCCTTCCTGTAGCACCATCTATCATCAATGATGTTGGACAGAAGATGGCG 273
consensus_6108#1      AGTGAAATTCCAGTTGTTGCAGCATGAA--ATCATT-----CGTTCG-------TTCATG 285
                      *  *** ** *  **  ** ****  *   *****       *** *        *   *

consensus_6108#0      GGGAACCATACTTTTGCTCATCTGTCTTGTCTGCAATGCATCAGGGACTTATGTTGGCGC 333
consensus_6108#1      GTGATTTACTCTGTTGGTTCTGCTTCTTGTTTCTGTTCC--------TCTCGATCGTCGG 337
                      * **   *  ** *** *  *   ****** *    * *          *   * * ** 

consensus_6108#0      CAACACGATCCCTTCGCCGGAGAACTCGCCGTCGGAGTTCGCCAAGATTGTTCAGTCTAA 393
consensus_6108#1      GTAATCGATCGTGTTGCCCGGT--TTCTGTACTGCTATTTGCTGAATTATACTAGTTCAT 395
                        *  *****   * *** *     **      *   ** **  *  *     ***  * 

consensus_6108#0      GCAGACGAAGCATGCGCGCGTGTTCATCGGCGGCGGGGACCATCGGTCGCTGCGATCGCT 453
consensus_6108#1      CCTCGTTATGCCAGCGTTGTTAATTCTTATCAGTATGATCTAACCTTTTCT-CAATTTCA 454
                       *     * **  ***    *  *  *   * *   *  * * *  *  ** * **  * 

consensus_6108#0      GGCGAACACCGGCGAGGAGGTGATCCTCACCGTGCCCAACGACCAGCTCG--AGCACATG 511
consensus_6108#1      AATTTAT-------------TGCGCTTCATTTCTCCTATCAATTAGCTGGCTACTTCATG 501
                           *              **  * ***     ** * * *  **** *  *   ****

consensus_6108#0      GCCGAGTTCCCGGAGGAGGCCGAGCTCTGGGTCGCCGCCAACGTCGCGCGGTTCC-TCCC 570
consensus_6108#1      TGCGA-TATTCATATTCTGTCAGTCAAAGCGTT-----TAATTTGGAGCGATTTTATTTT 555
                        *** *   *  *    * *   *   * **       **  * * *** **   *   

consensus_6108#0      GGCGACGAGGATCACGCACGTGGTGGCCGGCGACGACGTTGTGGCCAGGTCACCGGGGAA 630
consensus_6108#1      CCCTGTAAAAATC---CTTGTAGAGCTTTGC-ATGGGATTCTCGCATACCCAATAGGCTA 611
                        *    *  ***   *  ** * *    ** * *   ** * **     **   **  *

consensus_6108#0      CGCGTACTTCCTCCTCCCGGCGATGGCCAACCTCCACGCCGCGCTCGCCGCGTCGCGCCT 690
consensus_6108#1      CTTGAATTTGAGTTGTCCG--TATTACTGTTACTCCCCCCAATTTAAACTTTATGTATAT 669
                      *  * * **       ***   **  *       * * **    *   *     *    *

consensus_6108#0      CGACGGCCGCGTGAAGGTGTCGAGCGCGGTGTCCGGCGCCGCGCTGCAGGCTCCCCCGGC 750
consensus_6108#1      TTCTAGCTGGAAAAAAAAAAAAAAAA---------------------------------- 695
                           ** *    **       *                                     

consensus_6108#0      GTGGGCCGCCGCCGCCGTGGCGGGCGGCCTCCTCCGGTTCCTGAACGCCACCGGCGCGCC 810
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      GCTGTTCCTCAAGACCCGGCCGTCGGAGTCCACGGACACCATGGTCGACGCGGCCTACGG 870
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CGCGATGCGCGCGCTGGGGTTCCCCGGGGGCGCCATCCCGGTGATCGCGGCGCCGGTGGA 930
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      GACAGAAGAATTCGGCGGTGGCGCGACGACGGTGGTGTACCACAGCTACCTGCTGCAGGC 990
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CTCCGGCGGCGTCGGCGGCGGCGAGAGGCGGTCGCTGGCGACGTCGGCGGGGATGTTCTG 1050
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CGTGGCGCTGCAGAACGCGGACGCGGCGGCGCTGCAGGCGGGGCTGAACTGGGCGTGCGG 1110
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      GCCCGGGCAGGCGGACTGCGCGGCGATCCAGCCCGGCGGCGCGTGCTACAAGCAGAACAA 1170
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CCTGCCGGCGCTGGCGTCCTACGCCTACAACGACTACTACCAGAAGATGGCGTCCACCGG 1230
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CGCCACCTGCTCCTTCAATGGCACCGCCACCACCACCACCGCCGATCCCAGCTCAGGATC 1290
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      ATGCGTCTTCACAGGAAGCTCGATGGCAGGAGGCTCGAACACGAGCGTGCCGGGAGCCAG 1350
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CCCTCCGACGACGCTCTCCCCACCGGCGGGCCTCACGCCGCCGGTCGGCACCAGCCCACC 1410
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      GACCGACTTCAGCCCGCCGGCGGCCGGCACGACCCCTCCGGCCGGCGGCTTCACCCCGCC 1470
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      GGCGGGCGGCTTCGGCACCCCGCCGCTGGGCGGGTTCGGCACGCCGCCGTCGGGGTTCGG 1530
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CCCGCCGGGGAGCTTCAACGGGAGCGGCTCGTCGTTCGGGCCCAGCAGCGCCTTCAGCCC 1590
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      GTACGGCGGCGCCGGCCACCGCGACGGCGGCGCCTCCGGCGCTCGCCTCGCCGCCGCTGC 1650
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CCTCGCCGTGCTGCTCCTGTCCGTCGATCTCATGTGAAGTTCGTTTCTATTTGTGTAAAT 1710
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      TTGGGAATCATGCGTTGTGATGTTGCTCTGAGAAATTGCTGGTCTCTGTAGGCGGCGGAT 1770
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      TGAAATTATGCATACGAAAAATTAGGAGTTTATATATATATATGTAATTATGCATGTATA 1830
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      GTATATATACTTGATCAGCATGGACATTATCTAAAAAAATATGTGCTAGTCAGTCGCTGA 1890
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      CAATTTCTGTTCTTCGACCTGTCAGTTAATGGTTATACATGTACATGCCACTAGCCTCAC 1950
consensus_6108#1      ------------------------------------------------------------
                                                                                  

consensus_6108#0      GCATGGTTGA 1960
consensus_6108#1      ----------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)