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Oryza sativa
cluster # 6114 cluster # 6114       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6114#0 length = 976 sequences # 4  

consensusID : consensus_6114#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 976
fasta sequence
                              [AGCACGNCAGCTACTAGCCATGGTGACGACGCGGGGGATGGCCGACGNGTCGGCTNGCGGAAGGGTACGAGAGGGAGAGGGAGGCGAGGATCCAGGAGAACATGGAGCGGATCAGAAGCTGGGGATACGTGATCTTGCCAACCGCTTCAACCAGTCCGCGACCNGTTTCGCCGCNGNGANGCTGGAAGCGNGANATNCNGCTGGAGGCGANAGGTGCCTGTGACGGCGGGACCCAATCCCCATCGCCTGCTCGTCGGTCACTCAGGCTGAAGAGC-TAGATCCTGTTAACTACTNCGAGATTCGGACAAGAAAGGGCAAGGATGTTGAAGGTGGAAGCTCTGTTCCAATTGAGGTTGGGTCCGAGGAAGAAGTTAACGCAGAAGATGCTGCTCCGGTCGCTAAGGAGGATCAGGGCCATTCAGAGGCTATCCAGGATGAAGATGCTGACCACCACCAAGTGAATGACCCCGCTGATGATGATGGTGACGAGGATGACAGGGAGTCTGTGGTGACGTCTAGTTCTCAGGATTGTGAGGTTAATCTAGAAGACATTATTGGGTGTGCCACTTCATCTAAGCCGGCTGGCCCAAAGAAGAGAAAGTTGATCGAACGAAACCCTGACTATGTGTTGCGAGAGCTAGCTTGATCAGGTCCCGTTCCAACAGATCATGAACAGCCTGATCTTATGAGCATGACAGTCTCTTTTTGGTGCCCGTGCCCCGTGAACGATCTGTCAGTATCTTTTGCCGAGGAAAGACAGGTTTATTGGACCAGTGTGTTTCAGTTCATTTGCACGTACGTGCTG-TGTGTTAGTGTCATCATCGTTGGCTAGGCAATTGTGGCGCACGCTCTTTTGCTCGAAACTTTTATGGCTGTGCCAACTGCCAAGTATGGTTCTGCTTGATGATAT-AAGCTTATAATAATGCTCTATGAATCACAATAGGCTACATATATATTCAGCCTAATGCTTTAAAAA]

[+] EMBL C27618               [AGCACGNCAGCTACTAGCCATGGTGACGACGCGGGGGATGGCCGACGNGTCGGCTNGCGGAAGGGTACGAGAGGGAGAGGGAGGCGAGGATCCAGGAGAACATGGAGCGGATCAGAAGCTGGGGATACGTGATCTTGCCAACCGCTTCAACCAGTCCGCGACCNGTTTCGCCGCNGNGANGCTGGAAGCGNGANATNCNGCTGGAGGCGANAGGTGCCTGTGACGGCGGGACCCAATCCCCATCGCCTGCTCGTCGGTCACTCAGGCTGAAGAGC TAGATCCTGTTAACTACTNCGAGATTCGGACAAGAAAGGGCAAGGATGTTGAAGGTGGAAGCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU085761             [                                                                                                                                                                                                                                                                            GAAGANCTTAGATCCTGTTAACTACTGCGAGATTCGGACAAGAAAGGGCAAGGATGTTGAAGNTGGAAGCTCTGTTCCAATTGAGGTTGGGTCCGAGGAAGAAGTTAACGCAGAAGATGCTGCTCCGGTCGCTAAGGAGGATCAGGGCCATTCAGAGGCTATCCAGGATGAAGATGCTGACCACCACCAAGTGAATGACCCCGCTGATGATGATGGTGACGAGGATGACAGGGAGTCTGTGGTGACGTCTAGTTCTCAGGATTGTGAGGTTAATCTAGAAGACATTATTGGGTGTGCCACTTCATCTAAGCCGGCTGGCCCAAAGAAGAGAAAGTTGATCGAACGAAACCCTGACTATGTGTTGCGAGAGCTAGCTTGATCAGGTCCCGTTCCAACAGATCATGAACAGCCTGATCTTATGAGCATGACAGTCTCTTTTTGGTGCCCGTGCCCCGTGAACGATCTGTCAGTATCTTTTGCCGAGGAAAGACAGGTTTATTGGACCAGTGTGTTTCAGTTCATTTGNACGTACGTGCTG TGTGTTAGTGTCATCATCGTTGGCTAGGCAATTGTGGCGCACGCTCTTTTGCTCGAAACTTTTATGGCTGTGCCAACTGCCAAGTATGGTTCTGCTTGATGATAT AAGCTTATAATAATGCTCTATGAATCACAATAGGCTACATATAaaaa                   ]
[+] EMBL C29045               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTNAGGTTAATCTAGAAGACATTATTGGGTGTGCCACTTCATCTAAGCCGGCTGGCCCAAAGAAGAGAAAGTTGATCGAACGAAACCCTGACTATGTGTTGCGAGAGCTAGCTTGATCAGGTCCCGTTCCAACAGATCATGAACAGCCTGATCTTATGAGCATGACAGTCTCTTTTTGGTGCCCGTGCCCCGTGAACGATCTGTCAGTATCTTTTGCCGAGGAAAGACAGGTTTATTGGACCAGTGTGTTTCAGTTCATTTGCACGTACGTCTTGTTGTGTTAGTGTCATCATCGTTGGCTAGGCAATTGTGGCGCACGCTCTTTTGCTCGAAACTTTTATGGCTGTG CAACTGCCAAGTATGGTTCTGCTTGATGATATAAAGCTTATAATAATGNTCTATGANTCACAATAGGCTACATATATATTCAGCCTA            ]
[+] EMBL AU165276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAGGTTAATCTAGAAGACATTATTGGGTGTGCCACTTCATCTAAGCCGGCTGGCCCAAAGAAGAGAAAGTTGATCGAACGAAACCCTGACTATGTGTTGCGAGAGCTAGCTTGATCAGGTCCCGTTCCAACAGATCATGAACAGCCTGATCTTATGAGCATGACAGTCTCTTTTTGGTGCCCGTGCCCCGTGAACGATCTGTCAGTATCTTTTGCCGAGGAAAGACAGGTTTATTGGACCAGTGTGTTTCAGTTCATTTGCACGTACGTGCTG TGTGTTAGTGTCATCATCGTTGGCTAGGCAATTGTGGCGCACGCTCTTTTGCTCGAAACTTTTATGGCTGTGCCAACTGCCAAGTATGGTTCTGCTTGATGATAT AAGCTTATAATAATGCTCTATGAATCACAATAGGCTACATATATATTCAGCCTAATGCTTTAAAAA]


>consensus_6114#0 AGCACGNCAGCTACTAGCCATGGTGACGACGCGGGGGATGGCCGACGNGTCGGCTNGCGG AAGGGTACGAGAGGGAGAGGGAGGCGAGGATCCAGGAGAACATGGAGCGGATCAGAAGCT GGGGATACGTGATCTTGCCAACCGCTTCAACCAGTCCGCGACCNGTTTCGCCGCNGNGAN GCTGGAAGCGNGANATNCNGCTGGAGGCGANAGGTGCCTGTGACGGCGGGACCCAATCCC CATCGCCTGCTCGTCGGTCACTCAGGCTGAAGAGCTAGATCCTGTTAACTACTNCGAGAT TCGGACAAGAAAGGGCAAGGATGTTGAAGGTGGAAGCTCTGTTCCAATTGAGGTTGGGTC CGAGGAAGAAGTTAACGCAGAAGATGCTGCTCCGGTCGCTAAGGAGGATCAGGGCCATTC AGAGGCTATCCAGGATGAAGATGCTGACCACCACCAAGTGAATGACCCCGCTGATGATGA TGGTGACGAGGATGACAGGGAGTCTGTGGTGACGTCTAGTTCTCAGGATTGTGAGGTTAA TCTAGAAGACATTATTGGGTGTGCCACTTCATCTAAGCCGGCTGGCCCAAAGAAGAGAAA GTTGATCGAACGAAACCCTGACTATGTGTTGCGAGAGCTAGCTTGATCAGGTCCCGTTCC AACAGATCATGAACAGCCTGATCTTATGAGCATGACAGTCTCTTTTTGGTGCCCGTGCCC CGTGAACGATCTGTCAGTATCTTTTGCCGAGGAAAGACAGGTTTATTGGACCAGTGTGTT TCAGTTCATTTGCACGTACGTGCTGTGTGTTAGTGTCATCATCGTTGGCTAGGCAATTGT GGCGCACGCTCTTTTGCTCGAAACTTTTATGGCTGTGCCAACTGCCAAGTATGGTTCTGC TTGATGATATAAGCTTATAATAATGCTCTATGAATCACAATAGGCTACATATATATTCAG CCTAATGCTTTAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)