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Oryza sativa
cluster # 6126 cluster # 6126       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6126#0 length = 1755 sequences # 4  

consensusID : consensus_6126#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1755
fasta sequence
                              [GCAGCCTCATGTCCAGTCGAGTGTAACCACAAGCCCACGGGAATTTGCTGTCCAATGAAGACCCCACAAAACGACAAACTCCAATACCACACACCTCCGCTTCCCTCCAAATCGCAACAGAAATCCGAAGCGAAATCGCGCACGCACCGTCTCGCGATGCCGTCCCCGTCGCTCCGCCTCGCCGTCGTCGGCGCGGGCGCCGCCGGCCTGGTGGCGGCGCGGGAGCTCCGCCGGGAGGGCCACTCCCCCGTGGTGTTCGAGCGCGCCGCCTCCGTGGGCGGCACGTGGCTCTACGACGCCGCCCCCGCCACCTCCGACCCGCTCGCCGCCGGCGCCGCCCACTCCAGCCTCTACGCCTCGCTCCGCACCAACCTGCCGCGGGAGGTGATGGGCTTCCTCGACTTTCCCTTCGCCTCCTCCGCCGCGGAGGCCGGCGGCGGCGGCGACACGCGCAGGTTCCCCGGCCACGACGAGGTGCTCCGGTATCTGGAGGAGTTCGCGCGGCGGTTCGACCTGTACGGCCTCGTCCGCTTCGGGACGGAGGTGGTTAGGGTTCGGAGGGATGGCGGCGGCGGCGGCGGGAGGTGGGCGGTGACGTCGAGGAAGATCGGGGAGAAGGGGAGGCGTGAGGAGGAGGAGGAGGTGTATGATGCCATCGTGGTTTGCAATGGCCATTACACGGAGCCTCGCGTCGCCCACATACCTGGGGTGGAGGCTTGGCCTGGAAAGCAGATGCATAGCCACAATTACCGCGTTCCAGAGCCTTTCCACGATCAAGTAGTGATCATAATCGGGGCATCAGCAAGTGCAGTAGACATCTCAAGGGACCTTGCAGGTGTTGCAGAAGAGGTTCATGTTGCTGATAGATCAGCACCTGCCTGCACTTGCAAAAGGCAGCCTGGATATGATAATATGTGGCTCCATTCCATGATTGATCATGCACAAGAAGATGGCTGCGTGGTGTTTCAGGATGGCAGCTCAATCAAAGCCGATGTCATCATGCACTGTACTGGCTACTTGTATGATTTTCCATTCCTTGAGGATGATAGCGCCATCACCGTCGATGACAACTGTGTCGATCCACTATACAAGCACGTTTTCCCACCAGAAGTAGCACCTCACCTGTCCTTCATCGGATTGCCATGGAAGGTCATTCCTTTTCCATTGTTTGAACTCCAAAGCAAATGGGTTGCCGGCGTGCTATCAGGACGAGTCAAGCTTCCTTCGAGAGAAGAAATGATGGAAGATGTGAAAGCCTTCCACTCGAAAATGGAAGCGCGTGGATGGCCTAAGAGATACGCCCACAACTTTTCAGACTGTCAGTTTGAATATGATGATTGGCTTGCGGAGCAATGTGGCCATCCACCAATTGAACAATGGAGGAAGCTGATGTATGCTGCTAATTCAGAGAACAAGGCTGCTCGTCCGGAGAGTTACCGCGATGAGTGGGACGATGATCATCTTGTGGCAGAAGCAGCAGAAGATTTCAAGAAATACTTGTAAAATCTCAAGAAGATTTCATTCAATGTACATGATTGCAAATTTGCAATGCAGAAAACATCAGAGAATAATTCTGTACACCCAAAATCTCAATTCATGTCTGGAATGGGCACAAATGCTCGTCATCAGATAGTTGGTTTACTTGTGTATTATTTGATCATTTGATGCCTGTAGATTGTAATAATAACCTGAAGCAAAAACAAGAGAATAATTCTGTGCATGAGAAAGGAGAAAAAATGAGAAAAAAAAAAAAAA]

[+] EMBL AK120878             [GCAGCCTCATGTCCAGTCGAGTGTAACCACAAGCCCACGGGAATTTGCTGTCCAATGAAGACCCCACAAAACGACAAACTCCAATACCACACACCTCCGCTTCCCTCCAAATCGCAACAGAAATCCGAAGCGAAATCGCGCACGCACCGTCTCGCGATGCCGTCCCCGTCGCTCCGCCTCGCCGTCGTCGGCGCGGGCGCCGCCGGCCTGGTGGCGGCGCGGGAGCTCCGCCGGGAGGGCCACTCCCCCGTGGTGTTCGAGCGCGCCGCCTCCGTGGGCGGCACGTGGCTCTACGACGCCGCCCCCGCCACCTCCGACCCGCTCGCCGCCGGCGCCGCCCACTCCAGCCTCTACGCCTCGCTCCGCACCAACCTGCCGCGGGAGGTGATGGGCTTCCTCGACTTTCCCTTCGCCTCCTCCGCCGCGGAGGCCGGCGGCGGCGGCGACACGCGCAGGTTCCCCGGCCACGACGAGGTGCTCCGGTATCTGGAGGAGTTCGCGCGGCGGTTCGACCTGTACGGCCTCGTCCGCTTCGGGACGGAGGTGGTTAGGGTTCGGAGGGATGGCGGCGGCGGCGGCGGGAGGTGGGCGGTGACGTCGAGGAAGATCGGGGAGAAGGGGAGGCGTGAGGAGGAGGAGGAGGTGTATGATGCCATCGTGGTTTGCAATGGCCATTACACGGAGCCTCGCGTCGCCCACATACCTGGGGTGGAGGCTTGGCCTGGAAAGCAGATGCATAGCCACAATTACCGCGTTCCAGAGCCTTTCCACGATCAAGTAGTGATCATAATCGGGGCATCAGCAAGTGCAGTAGACATCTCAAGGGACCTTGCAGGTGTTGCAGAAGAGGTTCATGTTGCTGATAGATCAGCACCTGCCTGCACTTGCAAAAGGCAGCCTGGATATGATAATATGTGGCTCCATTCCATGATTGATCATGCACAAGAAGATGGCTGCGTGGTGTTTCAGGATGGCAGCTCAATCAAAGCCGATGTCATCATGCACTGTACTGGCTACTTGTATGATTTTCCATTCCTTGAGGATGATAGCGCCATCACCGTTGATGACAACTGTGTCGATCCACTATACAAGCACGTTTTCCCACCAGAAGTAGCACCTCACCTGTCCTTCATCGGATTGCCATGGAAGGTCATTCCTTTTCCATTGTTTGAACTCCAAAGCAAATGGGTTGCCGGCGTGCTATCAGGACGAGTCAAGCTTCCTTCGAGCGAAGAAATGATGGAAGATGTGAAAGCCTTCCACTCGAAAATGGAAGCGCGTGGATGGCCTAAGAGATACGCCCACAACTTTTCAGACTGTCAGTTTGAATATGATGATTGGCTTGCGGAGCAATGTGGCCATCCACCAATTGAACAATGGAGGAAGCTGATGTATGCTGCTAATTCAGAGAACAAGGCTGCTCGTCCGGAGAGTTACCGCGATGAGTGGGACGATGATCATCTTGTGGCAGAAGCAGCAGAAGATTTCAAGAAATACTTGTAAAATCTCAAGAAGATTTCATTCAATGTACATGATTGCAAATTTGCAATGCAGAAAACATCAGAGAATAATTCTGTACACCCAAAATCTCAATTCATGTCTGGAATGGGCACAAATGCTCGTCATCAGATAGTTGGTTTACTTGTGTATTATTTGATCATTTGATGCCTGTAGATTGTAATAATAACCTGAAGCAAAAACAAGAGAATAATTCTGTGCATGAGAAAGGAGAAACCTTGAG              ]
[-] EMBL CA759053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCCATTCCTTGAGGATGATAGCGCCATCACCGTCGATGACAACTGTGTCGATCCACTATACAAGCACGTTTTCCCACCAGAAGTAGCACCTCACCTGTCCTTCATCGGATTGCCATGGAAGGTCATTCCTTTTCCATTGTTTGAACTCCAAAGCAAATGGGTTGCCGGCGTGCTATCAGGACGAGTCAAGCTTCCTTCGAGAGAAGAAATGATGGAAGATGTGAAAGCCTTCCACTCGAAAATGGAAGCGCGTGGATGGCCTAAGAGATACGCCCACAGCTTTTCAGACTGTCAGTTTGAATATGATGATTGGCTTGCGGAGCAATGTGGCCATCCACCAATTGAACAATGGAGGAAGCTGATGTATGCTGCTAATTCAGAGAACAAGGCTGCTCGTCCGGAGAGTTACCGCGATGAGTGGGACGATGATCATCTTGTGGCAGAAGCAGCAGAAGATTTCAAGAAATACTTGTAAAATCTCAAGAAGATTTCATTCAATGTACGTGATTGCAAATTTGCAATGCAGAAAACATCAGAGAATAATTCTGTACACCCAAAATCTCAATTCATGTCTGGAATGGGCACAAATGCTCGTCATCAGATAGTTGGTTTACTTGTGTATTATTTGATCATTTGAGGCCTGTAGATTGTAATAATAACCTGAAGCAAAAACAAGAGAAAAAaaaaaaaaa                                   ]
[-] EMBL CA759055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGATGACAACTGTGTCGATCCNCTATACAAGCACGTTTTCCCACCAGAAGTAGCACCTCACCTGTCCTTTATTGGATTGCCATGGAAGGTCATTCCTTTTCCATTGTTTGAACTCCAAAGCAAATGGGTTGCCGGCGTGCTATCAGGACGAGTCAAGCTTCCTTCGAGAGAAGAAATGATGGAAGATGTGAAAGCCTTCCCCTCGAAAAAGGAAGCGCGTGGATGGCCTTAAAGATACGCCCACAACTTTTCAGACTGTCAGTTTGAATATGATGATTGGCCTGCGGAGCAATGTGGCCATCCCCCAATTGAACAATGGAGGAAGCTGATGTATGCTGCTAATTCAGAGAACAAGGCTGCTCGTCCGGAGAGTTACCGCGATGAGTGGGACGATGATCATTTTGTGGCAGAAGCAGCAGAAGATTTCAAGAAATACTTGTAAAATTTCAAGAAGATTTCCTTCAATGTACATGATTGCAAATTTGCAATGCAGAAAACATCAGAGAATAATTTTGTTCCCCCAAAATTTCAATTCATGTTTGGAATGGGCCCAAATGCTTGTCATTAGATAGTTGGTTTACTTGTGTATTATTTGATCATTTGAGGCCTGTAGATTGTAATAATAACCTGAAGCAAAAACAAGAGAATAATTTTGTGCCTTAGAAAGGAGAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU031514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGATGATTGGCTTGCGGAGCAATGTGGCCATCCACCAATTGAACAATGGAGGAAGCTGATGTATGCTGCTAATTCAGAGAACAAGGCTGCTCGTCCGGAGAGTTACCGCGATGAGTGGGACGATGATCATCTTGTGGCAGAAGCAGCAGAAGATTTCAAGAAATACTTGTAAAATCTCAAGAAGATTTCATTCAATGTACATGATTGCAAATTTGCAATGCAGAAAACATCAGAGAATAATTCTGTACACCCAAAATCTCAATTCATGTCTGGAATGGGCACAAATGCTCGTCATCAGATAGTTGGTTTACTTGTGTATTATTTGATCATTTGATGCCTGTAGATTGTAATAATAACCTGAAGCAAAAACAAGAGAATAATTCTGTGCATGAGAAAGGNGAAAAAA                  ]


>consensus_6126#0 GCAGCCTCATGTCCAGTCGAGTGTAACCACAAGCCCACGGGAATTTGCTGTCCAATGAAG ACCCCACAAAACGACAAACTCCAATACCACACACCTCCGCTTCCCTCCAAATCGCAACAG AAATCCGAAGCGAAATCGCGCACGCACCGTCTCGCGATGCCGTCCCCGTCGCTCCGCCTC GCCGTCGTCGGCGCGGGCGCCGCCGGCCTGGTGGCGGCGCGGGAGCTCCGCCGGGAGGGC CACTCCCCCGTGGTGTTCGAGCGCGCCGCCTCCGTGGGCGGCACGTGGCTCTACGACGCC GCCCCCGCCACCTCCGACCCGCTCGCCGCCGGCGCCGCCCACTCCAGCCTCTACGCCTCG CTCCGCACCAACCTGCCGCGGGAGGTGATGGGCTTCCTCGACTTTCCCTTCGCCTCCTCC GCCGCGGAGGCCGGCGGCGGCGGCGACACGCGCAGGTTCCCCGGCCACGACGAGGTGCTC CGGTATCTGGAGGAGTTCGCGCGGCGGTTCGACCTGTACGGCCTCGTCCGCTTCGGGACG GAGGTGGTTAGGGTTCGGAGGGATGGCGGCGGCGGCGGCGGGAGGTGGGCGGTGACGTCG AGGAAGATCGGGGAGAAGGGGAGGCGTGAGGAGGAGGAGGAGGTGTATGATGCCATCGTG GTTTGCAATGGCCATTACACGGAGCCTCGCGTCGCCCACATACCTGGGGTGGAGGCTTGG CCTGGAAAGCAGATGCATAGCCACAATTACCGCGTTCCAGAGCCTTTCCACGATCAAGTA GTGATCATAATCGGGGCATCAGCAAGTGCAGTAGACATCTCAAGGGACCTTGCAGGTGTT GCAGAAGAGGTTCATGTTGCTGATAGATCAGCACCTGCCTGCACTTGCAAAAGGCAGCCT GGATATGATAATATGTGGCTCCATTCCATGATTGATCATGCACAAGAAGATGGCTGCGTG GTGTTTCAGGATGGCAGCTCAATCAAAGCCGATGTCATCATGCACTGTACTGGCTACTTG TATGATTTTCCATTCCTTGAGGATGATAGCGCCATCACCGTCGATGACAACTGTGTCGAT CCACTATACAAGCACGTTTTCCCACCAGAAGTAGCACCTCACCTGTCCTTCATCGGATTG CCATGGAAGGTCATTCCTTTTCCATTGTTTGAACTCCAAAGCAAATGGGTTGCCGGCGTG CTATCAGGACGAGTCAAGCTTCCTTCGAGAGAAGAAATGATGGAAGATGTGAAAGCCTTC CACTCGAAAATGGAAGCGCGTGGATGGCCTAAGAGATACGCCCACAACTTTTCAGACTGT CAGTTTGAATATGATGATTGGCTTGCGGAGCAATGTGGCCATCCACCAATTGAACAATGG AGGAAGCTGATGTATGCTGCTAATTCAGAGAACAAGGCTGCTCGTCCGGAGAGTTACCGC GATGAGTGGGACGATGATCATCTTGTGGCAGAAGCAGCAGAAGATTTCAAGAAATACTTG TAAAATCTCAAGAAGATTTCATTCAATGTACATGATTGCAAATTTGCAATGCAGAAAACA TCAGAGAATAATTCTGTACACCCAAAATCTCAATTCATGTCTGGAATGGGCACAAATGCT CGTCATCAGATAGTTGGTTTACTTGTGTATTATTTGATCATTTGATGCCTGTAGATTGTA ATAATAACCTGAAGCAAAAACAAGAGAATAATTCTGTGCATGAGAAAGGAGAAAAAATGA GAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)