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Oryza sativa
cluster # 6136 cluster # 6136       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6136#0 length = 1277 sequences # 4  

consensusID : consensus_6136#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1277
fasta sequence
                              [CCCTGCCTCTCTGGAATGGATAGATCAGGTCATCGATCGATGGGCAGCAGCTCCGGCTCCGACCGGCTACGCGACCTCCAGGCCTTCGACGACACAAAGGCCGGCGTGAAGGGCCTCGTCGATGCCGGCGTCACAACCATCCCCGCCATCTTCCACCACCACCCGCTGCTACTGGACGATGCGGAGGAGGATGCGGATGTTATCCCGGTGATCGATCTGCAGGCGGACGTTGACCGAGGCCATCTGGTTGGTCAGGTGAGGGCGGCCGCCCAGTGTGTGGGGTTCTTCCAGGTGGTGAACCACGGCATCCCCGGCGAGCTCCTGGAGGAGATGCTGGCGGCGGTGCGGCGGTTCAACGAGCAGCCGGCGGAGGGCAAGAAAGCCTGGTACAGCAGGGACAGCGGGCGGAGGGTGAAGTTCAACTCCAATTTCGACCTGTTCCAGTCGCCGGCCGCCAACTGGCGTGACACGCTGTTGCTGGAGCTGACGCCACGGCCGGGGCCGGCAGCGGAGGAGATCCCACCGGCGTGCAGGGGCGTGGTGGGGGAGTACGTGGAGGCGGTGCAGAGGCTGGGCGGGGCGCTGTTGGAGCTGCTGTCGGAGGCGCTGGGGCTCCCGCCGGAGTACCTCGGCGGCCTCGGTGGGGGGCTGGCTACCATGGCAGCGCACTACTACCCGCCATGCCCGGAGCCGCACCTGACGCTGGGCACCACACGCCACTCCGACCCCAGCTTCCTGACAGTGCTGCTGCAGGAGAGCAAGGGCCTGCAGGTGCTCATGAGGCAGCGCCAGCGGTGGGTGGACGTCCCTCCGGTGGCCGGCGCTCTGGTGGTCAACATCGGCGACCTCCTCCAGCTAGTGTCCAACGACCTCTTCCGAAGCGTGGAGCACCGGGTGTTGGCAACCACCGCCGCCGCGGAGCCTCGCCTCTCCGTCGCCTGCTTCTTCCGTCCCGACTACGCCTGCACCAGGGTGTACGCCCCCGTCACCACCACGCCGCCGCCACCGCTCTACAGGAGCACCACCATGCCGGAGTTCCTCTCGCATTACAGAGCCAAAGGCCTCGACGGCCGATCCGCGCTCCACCACTTCAGGATCCCTCCTCCTTCATCTCCACCACATTAATTTTTTTTCTTAATTTCTTACAGATATGCTCCGTACCTTCGGACTCGTACTACTTTAATTAATTACAGTATATATGTATGTACGTATATATATATTCACATGATGCATTCATCATATATCATCCATCGGGACTATTTGTCTGTGTGTAAAAA]

[+] EMBL CB667517             [CCCTGCCTCTCTGGAATGGATAGATCAGGTCATCGATCGATGGGCAGCAGCTCCGGCTCCGACCGGCTACGCGACCTCCAGGCCTTCGACGACACAAAGGCCGGCGTGAAGGGCCTCGTCGATGCCGGCGTCACAACCATCCCCGCCATCTTCCACCACCACCCGCTGCTACTGGACGATGCGGAGGAGGATGCGGATGTTATCCCGGTGATCGATCTGCAGGCGGACGTTGACCGAGGCCATCTGGTTGGTCAGGTGAGGGCGGCCGCCCAGTGTGTGGGGTTCTTCCAGGTGGTGAACCACGGCATCCCCGGCGAGCTCCTGGAGGAGATGCTGGCGGCGGTGCGGCGGTTCAACGAGCAGCCGGCGGAGGGCAAGAAAGCCTGGTACAGCAGGGACAGCGGGCGGAGGGTGAAGTTCAACTCCAATTTCGACCTGTTCCAGTCGCCGGCCGCCAACTGGCGTGACACGCTGTTGCTGGAGCTGACGCCACGGCCGGGGCCGGCAGCGGAGGAGATCCCACCGGCGTGCAGGGGCGTGGTGGGGGAGTACGTGGAGGCGGTGCAGAGGCTGGGCGGGGCGCTGTTGGAGCTGCTGTCGGAGGCGCTGGGGCTCCCGCCGGAGTACCTCGGCGGCCTCGGTGGGGGGCTGGCTACCATGGCAGCGCACTACTACCCGCCATGCCCGGAGCCGCACCTGACGCTGGGCACCACACGCCACTCCGACCCCAGCTTCCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK071828             [                             TCATCGATCGATGGGCAGCAGCTCCGGCTCCGACCGGCTACGCGACCTCCAGGCCTTCGACGACACAAAGGCCGGCGTGAAGGGCCTCGTCGATGCCGGCGTCACAACCATCCCCGCCATCTTCCACCACCACCCGCTGCTACTGGACGATGCGGAGGAGGATGCGGATGTTATCCCGGTGATCGATCTGCAGGCGGACGTTGACCGAGGCCATCTGGTTGGTCAGGTGAGGGCGGCCGCCCAGTGTGTGGGGTTCTTCCAGGTGGTGAACCACGGCATCCCCGGCGAGCTCCTGGAGGAGATGCTGGCGGCGGTGCGGCGGTTCAACGAGCAGCCGGCGGAGGGCAAGAAAGCCTGGTACAGCAGGGACAGCGGGCGGAGGGTGAAGTTCAACTCCAATTTCGACCTGTTCCAGTCGCCGGCCGCCAACTGGCGTGACACGCTGTTGCTGGAGCTGACGCCACGGCCGGGGCCGGCAGCGGAGGAGATCCCACCGGCGTGCAGGGGCGTGGTGGGGGAGTACGTGGAGGCGGTGCAGAGGCTGGGCGGGGCGCTGTTGGAGCTGCTGTCGGAGGCGCTGGGGCTCCCGCCGGAGTACCTCGGCGGCCTCGGTGGGGGGCTGGCTACCATGGCAGCGCACTACTACCCGCCATGCCCGGAGCCGCACCTGACGCTGGGCACCACACGCCACTCCGACCCCAGCTTCCTGACAGTGCTGCTGCAGGAGAGCAAGGGCCTGCAGGTGCTCATGAGGCAGCGCCAGCGGTGGGTGGACGTCCCTCCGGTGGCCGGCGCTCTGGTGGTCAACATCGGCGACCTCCTCCAGCTAGTGTCCAACGACCTCTTCCGAAGCGTGGAGCACCGGGTGTTGGCAACCACCGCCGCCGCGGAGCCTCGCCTCTCCGTCGCCTGCTTCTTCCGTCCCGACTACGCCTGCACCAGGGTGTACGCCCCCGTCACCACCACGCCGCCGCCACCGCTCTACAGGAGCACCACCATGCCGGAGTTCCTCTCGCATTACAGAGCCAAAGGCCTCGACGGCCGATCCGCGCTCCACCACTTCAGGATCCCTCCTCCTTCATCTCCACCACATTAATTTTTTTTCTTAATTTCTTACAGATATGCTCCGTACCTTCGGACTCGTACTACTTTAATTAATTACAGTATATATGTATGTACGTATATATATATTCACATGATGCATTCATCATATATCATCCATCGGGACTATTT               ]
[-] EMBL CB667518             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCCCACCGGCGTGCAGGGGCGTGGTGGGGGAGTACGTGGAGGCGGTGCAGAGGCTGGGCGGGGCGCTGTTGGAGCTGCTGTCGGAGGCGCTGGGGCTCCCGCCGGAGTACCTCGGCGGCCTCGGTGGGGGGCTGGCTACCATGGCAGCGCACTACTACCCGCCATGCCCGGAGCCGCACCTGACGNTGGGCACCACACGCCACTCCGACCCCAGCTTCCTGACAGTGCTGCTGCAGGAGAGCAAGGGCCTGCAGGTGCTCATGAGGCAGCGCCAGCGGTGGGTGGACGTCCCTCCGGTGGCCGGCGCTCTGGTGGTCAACATCGGCGACCTCCTCCAGCTAGTGTCCAACGACCTCTTCCGAAGCGTGGAGCACCGGGTGTTGGCAACCACCGCCGCCGCGGAGCCTCGCCTCTCCGTCGCCTGCTTCTTCCGTCCCGACTACGCCTGCACCAGGGTGTACGCCCCCGTCACCACCACGCCGCCGCCACCGCTCTACAGGAGCACCACCATGCCGGAGTTCCTCTCGCATTACAGAGCCAAAGGCCTCGACGGCCGATCCGCGCTCCACCACTTCAGGATCCCTCCTCCTTCATCTCCACCACATTAATTTTTTTTCTTAATTTCTTACAGATATGCTCCGTACCTTCGGACTCGTACTACTTTAATTAATTACAGTATATATGTATGGACGTATATATATATTCACATGATGCATTCATCAaaaaaaaga                             ]
[+] EMBL CF298400             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTTCTTAATTTCTTACAGATATGCTCCGTACCTTCGGACTCGTACTACTTTAATTAATTACAGTATATATGTATGTACGTATATATATATTCACATGATGCATTCATCATATATCATCCATCGGGACTATTTGTCTGTGTGTAAAAA]


>consensus_6136#0 CCCTGCCTCTCTGGAATGGATAGATCAGGTCATCGATCGATGGGCAGCAGCTCCGGCTCC GACCGGCTACGCGACCTCCAGGCCTTCGACGACACAAAGGCCGGCGTGAAGGGCCTCGTC GATGCCGGCGTCACAACCATCCCCGCCATCTTCCACCACCACCCGCTGCTACTGGACGAT GCGGAGGAGGATGCGGATGTTATCCCGGTGATCGATCTGCAGGCGGACGTTGACCGAGGC CATCTGGTTGGTCAGGTGAGGGCGGCCGCCCAGTGTGTGGGGTTCTTCCAGGTGGTGAAC CACGGCATCCCCGGCGAGCTCCTGGAGGAGATGCTGGCGGCGGTGCGGCGGTTCAACGAG CAGCCGGCGGAGGGCAAGAAAGCCTGGTACAGCAGGGACAGCGGGCGGAGGGTGAAGTTC AACTCCAATTTCGACCTGTTCCAGTCGCCGGCCGCCAACTGGCGTGACACGCTGTTGCTG GAGCTGACGCCACGGCCGGGGCCGGCAGCGGAGGAGATCCCACCGGCGTGCAGGGGCGTG GTGGGGGAGTACGTGGAGGCGGTGCAGAGGCTGGGCGGGGCGCTGTTGGAGCTGCTGTCG GAGGCGCTGGGGCTCCCGCCGGAGTACCTCGGCGGCCTCGGTGGGGGGCTGGCTACCATG GCAGCGCACTACTACCCGCCATGCCCGGAGCCGCACCTGACGCTGGGCACCACACGCCAC TCCGACCCCAGCTTCCTGACAGTGCTGCTGCAGGAGAGCAAGGGCCTGCAGGTGCTCATG AGGCAGCGCCAGCGGTGGGTGGACGTCCCTCCGGTGGCCGGCGCTCTGGTGGTCAACATC GGCGACCTCCTCCAGCTAGTGTCCAACGACCTCTTCCGAAGCGTGGAGCACCGGGTGTTG GCAACCACCGCCGCCGCGGAGCCTCGCCTCTCCGTCGCCTGCTTCTTCCGTCCCGACTAC GCCTGCACCAGGGTGTACGCCCCCGTCACCACCACGCCGCCGCCACCGCTCTACAGGAGC ACCACCATGCCGGAGTTCCTCTCGCATTACAGAGCCAAAGGCCTCGACGGCCGATCCGCG CTCCACCACTTCAGGATCCCTCCTCCTTCATCTCCACCACATTAATTTTTTTTCTTAATT TCTTACAGATATGCTCCGTACCTTCGGACTCGTACTACTTTAATTAATTACAGTATATAT GTATGTACGTATATATATATTCACATGATGCATTCATCATATATCATCCATCGGGACTAT TTGTCTGTGTGTAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)