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Oryza sativa
cluster # 614 cluster # 614       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_614#0 length = 2663 sequences # 1  
consensus_614#1 length = 1119 sequences # 1  

consensusID : consensus_614#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2663
fasta sequence
                              [AATTTCCTAATATCCCCTACTTCCGATCTCAACGCCGGCATCGTCTCGCCGTGAACTCGCCAAGACCTCCGCGTGACGGGAAGCGGAGCGGGAAAAGGAGGATCCATCCGTCCGGTACACGAGCTCCTCGTCGACGCCGCCGGGGGAGGGAGGGAGGGGGAGGATGATCCTTCCGCTGGCGAAGCTGGGGACGCTGGCGCTGAAGACGATGTCGAAGCCGATCGCCATCCGCCTCAAGACGGAGGCCAGCCGCCACCCTCAGTTCCGCCAGCTCATCATCAACCTCGCCCAGACAAATCATCGGGTCTCCACAAATATCCAGAGAAGAATATATGGCCATTCAACTAAGGTTGAGATTCGGCCTTTGAACGAGGAGAAAGCTGTTCAAGCTGCTGCTGATCTTATTGGGGAGCTCTTTGTTTTCTCGTAGGTTGCTGGGGCTGCTGTAATCTTTGAGGTGCAAAGAAGCGCAAGGTCCGAGGCCCGAAAAGAGGAGGCTCGTAGAAACGAAGTTGAGGTATAAGCTCTGGAATGTCAATAGTTTTGTAACTTGAGATGAGTTGTGTCTTCGCAGGGTAATGGTTTTCTTTTTGTTAACGTCCACATATTTCATTTCAGTGACTATATTCATTTATGTATCTATAATCTATAAATAGGAGCCCCCCCAAAAAAATCACATAGCTCATTGGTATATCCAAACAACAAATTGTCTGATGCAGCTATTCAATCTTAGGATTATTCTACCAAATGTTACTAAAAAAATTAATCAGTTCAATGGCCTGGGAATAATTGGGGATGAATAGCTATTGTTTACATTGCTGAGAATCGTCAGGATAGCTCTAATATTTCAGTGAAGTCTTGCAAGTGATAACAAACAAGGCAATGCTTGGGCTATATCTTGGATACAGTTGTATTCTTGGAGTACACTCCAGTATAGGAGTTATTACATTCTAAATAATGTGTAGAAGGACTGTAGCAGCGAAGTGCTCTAATATTGGATGACAGCGATATAAGAGACACAAAGTGCTTACCTTTATTGTCTGAAGTTATAAATCAGTCAAATGTAAGTAGACTGTCTTGTCTGAAGTCTTGTAGTAATGATTCAATTATGGAGGATAGCAACTATTTGCAACAAATAATCATATGTAAACCTGTACTGCATTTTCACCAAACTGTTGCTATGAAAACCAAAAATACATTTATACCAAAGCTATGCTACACACCTTGCAGTACAGTAGCCCTAATGGGTTGTAAAAGGCCATAGCAAGCTGCAACCATACAGAGTGCTGCAGACTTTGCCTGCAGTTAGTATCAGGCACTACACCTTAATTCTAAACCAGGGCTATTGTAGTGTTATCATGGCCTTTTCTGAACATTCAATAGGTATCAGATCTGTGAGCAATAATATGGCAGCAGGCCAACTGTTCTTTTTTTTCCTCTAAAATTGGCCATTTATAGTTTTTGTTGCATTGCATATTTTTTGACCAATTTACATTTTGCATAAATAGTCTAGAATTTGATGTTTCAGCAATATCACGTCGTTGACTTGTTCTTTGCTGTTTATTTTCATTGTTATGCTTTATATCATTCAATATGGACCAGCTTTGTGGATTGTCTTTTTCCTGTCCAAGCAAGTGACAGTTACCAGACAGATCTGTTTGGTGTATGCAGAAGAGGTAGTACTCTTCTCTCTGAAAAGGACAAGAGAACAGATAGCAGTCTGAAACACTGGAAATATACCTTAGGTTGTGGCTTTGTGAGAACCAGAGATGAATGAAACAGAATCAAGTCCAAGAGTAATGTATTGCTATGGTATCCCATAAATCCCAAGTGGAAATGAAATTCCTATATGTACCATATGAAACTGAAGTCTCTGCAACAAAAACTCACTATCAATAGGTGTTGACCAGAGAACATTTGATGTCAACATTATCTTCAATGTGCATGAGTGGCTCTGGTTAGACAATGCATTGCAGTAGCATGTATTCATAAATCATCTGGCCTTTGACTCCAGTTGTTAATGTGCTTTGCCATTATGTGACCGTATATCTTCAGTCTTGCTGTTGGTGATGTTATTGACTTGTGTTGCTATTTTTTGTCGATTATTTCTATCATTTTATGAGTTTGAAAAAAAAACATTTATTTTGTAGGCGTTGAGGCAAAAGGAGGATCAGTTGGCTCGGGAGATAGAGATTGTGAAGCAGAAACTTGGCGAGATAGAGCGCCAAGCTAATTCTCGAGGTCTCTCTGGAGTTCTTTTCAGAAGCAGCAGTGCTCCAGACCAAACAAAGGCCTCATGAGTTTGATTAACTAGGACAAAGGCAAGACTTCAATGGCAGCATCACAACCAAGTTAATCGATTACTGTCCTGCATTGCTTGTGATATTGCACATGGATGTGCAGATTTTTGAAGCACACATCTTGTAGCTTGTGTTTTTCCTGCCAATCACCATGGGAATGGGCCCATAGCTTGAGGTTTCGAACAACTTGTCGTATTTGAGGCTATTTTAACTCGAAAGCGTTGGAGAGCAGTTCCAAGAAGGGAACATCTGGCAAGTGCAAAGCAGAATTGTGCTATGTGTGTGTTGTCTGGCAATTCTCGCGAGTTGTCAACTTGCATCATAAGATAACTGTATGCCATGAACTTGTCAACATGGGAAGCA]

[+] EMBL AK100390             [AATTTCCTAATATCCCCTACTTCCGATCTCAACGCCGGCATCGTCTCGCCGTGAACTCGCCAAGACCTCCGCGTGACGGGAAGCGGAGCGGGAAAAGGAGGATCCATCCGTCCGGTACACGAGCTCCTCGTCGACGCCGCCGGGGGAGGGAGGGAGGGGGAGGATGATCCTTCCGCTGGCGAAGCTGGGGACGCTGGCGCTGAAGACGATGTCGAAGCCGATCGCCATCCGCCTCAAGACGGAGGCCAGCCGCCACCCTCAGTTCCGCCAGCTCATCATCAACCTCGCCCAGACAAATCATCGGGTCTCCACAAATATCCAGAGAAGAATATATGGCCATTCAACTAAGGTTGAGATTCGGCCTTTGAACGAGGAGAAAGCTGTTCAAGCTGCTGCTGATCTTATTGGGGAGCTCTTTGTTTTCTCGTAGGTTGCTGGGGCTGCTGTAATCTTTGAGGTGCAAAGAAGCGCAAGGTCCGAGGCCCGAAAAGAGGAGGCTCGTAGAAACGAAGTTGAGGTATAAGCTCTGGAATGTCAATAGTTTTGTAACTTGAGATGAGTTGTGTCTTCGCAGGGTAATGGTTTTCTTTTTGTTAACGTCCACATATTTCATTTCAGTGACTATATTCATTTATGTATCTATAATCTATAAATAGGAGCCCCCCCAAAAAAATCACATAGCTCATTGGTATATCCAAACAACAAATTGTCTGATGCAGCTATTCAATCTTAGGATTATTCTACCAAATGTTACTAAAAAAATTAATCAGTTCAATGGCCTGGGAATAATTGGGGATGAATAGCTATTGTTTACATTGCTGAGAATCGTCAGGATAGCTCTAATATTTCAGTGAAGTCTTGCAAGTGATAACAAACAAGGCAATGCTTGGGCTATATCTTGGATACAGTTGTATTCTTGGAGTACACTCCAGTATAGGAGTTATTACATTCTAAATAATGTGTAGAAGGACTGTAGCAGCGAAGTGCTCTAATATTGGATGACAGCGATATAAGAGACACAAAGTGCTTACCTTTATTGTCTGAAGTTATAAATCAGTCAAATGTAAGTAGACTGTCTTGTCTGAAGTCTTGTAGTAATGATTCAATTATGGAGGATAGCAACTATTTGCAACAAATAATCATATGTAAACCTGTACTGCATTTTCACCAAACTGTTGCTATGAAAACCAAAAATACATTTATACCAAAGCTATGCTACACACCTTGCAGTACAGTAGCCCTAATGGGTTGTAAAAGGCCATAGCAAGCTGCAACCATACAGAGTGCTGCAGACTTTGCCTGCAGTTAGTATCAGGCACTACACCTTAATTCTAAACCAGGGCTATTGTAGTGTTATCATGGCCTTTTCTGAACATTCAATAGGTATCAGATCTGTGAGCAATAATATGGCAGCAGGCCAACTGTTCTTTTTTTTCCTCTAAAATTGGCCATTTATAGTTTTTGTTGCATTGCATATTTTTTGACCAATTTACATTTTGCATAAATAGTCTAGAATTTGATGTTTCAGCAATATCACGTCGTTGACTTGTTCTTTGCTGTTTATTTTCATTGTTATGCTTTATATCATTCAATATGGACCAGCTTTGTGGATTGTCTTTTTCCTGTCCAAGCAAGTGACAGTTACCAGACAGATCTGTTTGGTGTATGCAGAAGAGGTAGTACTCTTCTCTCTGAAAAGGACAAGAGAACAGATAGCAGTCTGAAACACTGGAAATATACCTTAGGTTGTGGCTTTGTGAGAACCAGAGATGAATGAAACAGAATCAAGTCCAAGAGTAATGTATTGCTATGGTATCCCATAAATCCCAAGTGGAAATGAAATTCCTATATGTACCATATGAAACTGAAGTCTCTGCAACAAAAACTCACTATCAATAGGTGTTGACCAGAGAACATTTGATGTCAACATTATCTTCAATGTGCATGAGTGGCTCTGGTTAGACAATGCATTGCAGTAGCATGTATTCATAAATCATCTGGCCTTTGACTCCAGTTGTTAATGTGCTTTGCCATTATGTGACCGTATATCTTCAGTCTTGCTGTTGGTGATGTTATTGACTTGTGTTGCTATTTTTTGTCGATTATTTCTATCATTTTATGAGTTTGAAAAAAAAACATTTATTTTGTAGGCGTTGAGGCAAAAGGAGGATCAGTTGGCTCGGGAGATAGAGATTGTGAAGCAGAAACTTGGCGAGATAGAGCGCCAAGCTAATTCTCGAGGTCTCTCTGGAGTTCTTTTCAGAAGCAGCAGTGCTCCAGACCAAACAAAGGCCTCATGAGTTTGATTAACTAGGACAAAGGCAAGACTTCAATGGCAGCATCACAACCAAGTTAATCGATTACTGTCCTGCATTGCTTGTGATATTGCACATGGATGTGCAGATTTTTGAAGCACACATCTTGTAGCTTGTGTTTTTCCTGCCAATCACCATGGGAATGGGCCCATAGCTTGAGGTTTCGAACAACTTGTCGTATTTGAGGCTATTTTAACTCGAAAGCGTTGGAGAGCAGTTCCAAGAAGGGAACATCTGGCAAGTGCAAAGCAGAATTGTGCTATGTGTGTGTTGTCTGGCAATTCTCGCGAGTTGTCAACTTGCATCATAAGATAACTGTATGCCATGAACTTGTCAACATGGGAAGCA]


>consensus_614#0 AATTTCCTAATATCCCCTACTTCCGATCTCAACGCCGGCATCGTCTCGCCGTGAACTCGC CAAGACCTCCGCGTGACGGGAAGCGGAGCGGGAAAAGGAGGATCCATCCGTCCGGTACAC GAGCTCCTCGTCGACGCCGCCGGGGGAGGGAGGGAGGGGGAGGATGATCCTTCCGCTGGC GAAGCTGGGGACGCTGGCGCTGAAGACGATGTCGAAGCCGATCGCCATCCGCCTCAAGAC GGAGGCCAGCCGCCACCCTCAGTTCCGCCAGCTCATCATCAACCTCGCCCAGACAAATCA TCGGGTCTCCACAAATATCCAGAGAAGAATATATGGCCATTCAACTAAGGTTGAGATTCG GCCTTTGAACGAGGAGAAAGCTGTTCAAGCTGCTGCTGATCTTATTGGGGAGCTCTTTGT TTTCTCGTAGGTTGCTGGGGCTGCTGTAATCTTTGAGGTGCAAAGAAGCGCAAGGTCCGA GGCCCGAAAAGAGGAGGCTCGTAGAAACGAAGTTGAGGTATAAGCTCTGGAATGTCAATA GTTTTGTAACTTGAGATGAGTTGTGTCTTCGCAGGGTAATGGTTTTCTTTTTGTTAACGT CCACATATTTCATTTCAGTGACTATATTCATTTATGTATCTATAATCTATAAATAGGAGC CCCCCCAAAAAAATCACATAGCTCATTGGTATATCCAAACAACAAATTGTCTGATGCAGC TATTCAATCTTAGGATTATTCTACCAAATGTTACTAAAAAAATTAATCAGTTCAATGGCC TGGGAATAATTGGGGATGAATAGCTATTGTTTACATTGCTGAGAATCGTCAGGATAGCTC TAATATTTCAGTGAAGTCTTGCAAGTGATAACAAACAAGGCAATGCTTGGGCTATATCTT GGATACAGTTGTATTCTTGGAGTACACTCCAGTATAGGAGTTATTACATTCTAAATAATG TGTAGAAGGACTGTAGCAGCGAAGTGCTCTAATATTGGATGACAGCGATATAAGAGACAC AAAGTGCTTACCTTTATTGTCTGAAGTTATAAATCAGTCAAATGTAAGTAGACTGTCTTG TCTGAAGTCTTGTAGTAATGATTCAATTATGGAGGATAGCAACTATTTGCAACAAATAAT CATATGTAAACCTGTACTGCATTTTCACCAAACTGTTGCTATGAAAACCAAAAATACATT TATACCAAAGCTATGCTACACACCTTGCAGTACAGTAGCCCTAATGGGTTGTAAAAGGCC ATAGCAAGCTGCAACCATACAGAGTGCTGCAGACTTTGCCTGCAGTTAGTATCAGGCACT ACACCTTAATTCTAAACCAGGGCTATTGTAGTGTTATCATGGCCTTTTCTGAACATTCAA TAGGTATCAGATCTGTGAGCAATAATATGGCAGCAGGCCAACTGTTCTTTTTTTTCCTCT AAAATTGGCCATTTATAGTTTTTGTTGCATTGCATATTTTTTGACCAATTTACATTTTGC ATAAATAGTCTAGAATTTGATGTTTCAGCAATATCACGTCGTTGACTTGTTCTTTGCTGT TTATTTTCATTGTTATGCTTTATATCATTCAATATGGACCAGCTTTGTGGATTGTCTTTT TCCTGTCCAAGCAAGTGACAGTTACCAGACAGATCTGTTTGGTGTATGCAGAAGAGGTAG TACTCTTCTCTCTGAAAAGGACAAGAGAACAGATAGCAGTCTGAAACACTGGAAATATAC CTTAGGTTGTGGCTTTGTGAGAACCAGAGATGAATGAAACAGAATCAAGTCCAAGAGTAA TGTATTGCTATGGTATCCCATAAATCCCAAGTGGAAATGAAATTCCTATATGTACCATAT GAAACTGAAGTCTCTGCAACAAAAACTCACTATCAATAGGTGTTGACCAGAGAACATTTG ATGTCAACATTATCTTCAATGTGCATGAGTGGCTCTGGTTAGACAATGCATTGCAGTAGC ATGTATTCATAAATCATCTGGCCTTTGACTCCAGTTGTTAATGTGCTTTGCCATTATGTG ACCGTATATCTTCAGTCTTGCTGTTGGTGATGTTATTGACTTGTGTTGCTATTTTTTGTC GATTATTTCTATCATTTTATGAGTTTGAAAAAAAAACATTTATTTTGTAGGCGTTGAGGC AAAAGGAGGATCAGTTGGCTCGGGAGATAGAGATTGTGAAGCAGAAACTTGGCGAGATAG AGCGCCAAGCTAATTCTCGAGGTCTCTCTGGAGTTCTTTTCAGAAGCAGCAGTGCTCCAG ACCAAACAAAGGCCTCATGAGTTTGATTAACTAGGACAAAGGCAAGACTTCAATGGCAGC ATCACAACCAAGTTAATCGATTACTGTCCTGCATTGCTTGTGATATTGCACATGGATGTG CAGATTTTTGAAGCACACATCTTGTAGCTTGTGTTTTTCCTGCCAATCACCATGGGAATG GGCCCATAGCTTGAGGTTTCGAACAACTTGTCGTATTTGAGGCTATTTTAACTCGAAAGC GTTGGAGAGCAGTTCCAAGAAGGGAACATCTGGCAAGTGCAAAGCAGAATTGTGCTATGT GTGTGTTGTCTGGCAATTCTCGCGAGTTGTCAACTTGCATCATAAGATAACTGTATGCCA TGAACTTGTCAACATGGGAAGCA



consensusID : consensus_614#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1119
fasta sequence
                              [ATTTCCTAATATCCCCTACTTCCGATCTCAACGCCGGCATCGTCTCGCCGTGAACTCGCCAAGACCTCCGCCGCCGCCGCCGCCTCATCTCCCAAGCTCCTCCGCGGCCGCGTGACGGGAAGCGGAGCGGGAAAAGGAGGATCCATCCGTCCGGTACACGAGCTCCTCGTCGACGCCGCCGGGGGAGGGAGGGAGGGGGAGGATGATCCTTCCGCTGGCGAAGCTGGGGACGCTGGCGCTGAAGACGATGTCGAAGCCGATCGCCATCCGCCTCAAGACGGAGGCCAGCCGCCACCCTCAGTTCCGCCAGCTCATCATCAACCTCGCCCAGACAAATCATCGGGTCTCCACAAATATCCAGAGAAGAATATATGGCCATTCAACTAAGGTTGAGATTCGGCCTTTGAACGAGGAGAAAGCTGTTCAAGCTGCTGCTGATCTTATTGGGGAGCTCTTTGTTTTCTCGGTTGCTGGGGCTGCTGTAATCTTTGAGGTGCAAAGAAGCGCAAGGTCCGAGGCCCGAAAAGAGGAGGCTCGTAGAAACGAAGTTGAGGCGTTGAGGCAAAAGGAGGATCAGTTGGCTCGGGAGATAGAGATTGTGAAGCAGAAACTTGGCGAGATAGAGCGCCAAGCTAATTCTCGAGGTCTCTCTGGAGTTCTTTTCAGAAGCAGCAGTGCTCCAGACCAAACAAAGGCCTCATGAGTTTGATTAACTAGGACAAAGGCAAGACTTCAATGGCAGCATCACAACCAAGTTAATCGATTACTGTCCTGCATTGCTTGTGATATTGCACATGGATGTGCAGATTTTTGAAGCACACATCTTGTAGCTTGTGTTTTTCCTGCCAATCACCATGGGAATGGGCCCATAGCTTGAGGTTTCGAACAACTTGTCGTATTTGAGGCTATTTTAACTCGAAAGCGTTGGAGAGCAGTTCCAAGAAGGGAACATCTGGCAAGTGCAAAGCAGAATTGTGCTATGTGTGTGTTGTCTGGCAATTCTCGCGAGTTGTCAACTTGCATCATAAGATAACTGTATGCCATGAACTTGTCAACATGGGAAGCAGATTGCTGCCAAAGTACTTCTGGTTTGTAACTCGATCATGTTCATATCAGTGT]

[+] EMBL AK061035             [ATTTCCTAATATCCCCTACTTCCGATCTCAACGCCGGCATCGTCTCGCCGTGAACTCGCCAAGACCTCCGCCGCCGCCGCCGCCTCATCTCCCAAGCTCCTCCGCGGCCGCGTGACGGGAAGCGGAGCGGGAAAAGGAGGATCCATCCGTCCGGTACACGAGCTCCTCGTCGACGCCGCCGGGGGAGGGAGGGAGGGGGAGGATGATCCTTCCGCTGGCGAAGCTGGGGACGCTGGCGCTGAAGACGATGTCGAAGCCGATCGCCATCCGCCTCAAGACGGAGGCCAGCCGCCACCCTCAGTTCCGCCAGCTCATCATCAACCTCGCCCAGACAAATCATCGGGTCTCCACAAATATCCAGAGAAGAATATATGGCCATTCAACTAAGGTTGAGATTCGGCCTTTGAACGAGGAGAAAGCTGTTCAAGCTGCTGCTGATCTTATTGGGGAGCTCTTTGTTTTCTCGGTTGCTGGGGCTGCTGTAATCTTTGAGGTGCAAAGAAGCGCAAGGTCCGAGGCCCGAAAAGAGGAGGCTCGTAGAAACGAAGTTGAGGCGTTGAGGCAAAAGGAGGATCAGTTGGCTCGGGAGATAGAGATTGTGAAGCAGAAACTTGGCGAGATAGAGCGCCAAGCTAATTCTCGAGGTCTCTCTGGAGTTCTTTTCAGAAGCAGCAGTGCTCCAGACCAAACAAAGGCCTCATGAGTTTGATTAACTAGGACAAAGGCAAGACTTCAATGGCAGCATCACAACCAAGTTAATCGATTACTGTCCTGCATTGCTTGTGATATTGCACATGGATGTGCAGATTTTTGAAGCACACATCTTGTAGCTTGTGTTTTTCCTGCCAATCACCATGGGAATGGGCCCATAGCTTGAGGTTTCGAACAACTTGTCGTATTTGAGGCTATTTTAACTCGAAAGCGTTGGAGAGCAGTTCCAAGAAGGGAACATCTGGCAAGTGCAAAGCAGAATTGTGCTATGTGTGTGTTGTCTGGCAATTCTCGCGAGTTGTCAACTTGCATCATAAGATAACTGTATGCCATGAACTTGTCAACATGGGAAGCAGATTGCTGCCAAAGTACTTCTGGTTTGTAACTCGATCATGTTCATATCAGTGT]


>consensus_614#1 ATTTCCTAATATCCCCTACTTCCGATCTCAACGCCGGCATCGTCTCGCCGTGAACTCGCC AAGACCTCCGCCGCCGCCGCCGCCTCATCTCCCAAGCTCCTCCGCGGCCGCGTGACGGGA AGCGGAGCGGGAAAAGGAGGATCCATCCGTCCGGTACACGAGCTCCTCGTCGACGCCGCC GGGGGAGGGAGGGAGGGGGAGGATGATCCTTCCGCTGGCGAAGCTGGGGACGCTGGCGCT GAAGACGATGTCGAAGCCGATCGCCATCCGCCTCAAGACGGAGGCCAGCCGCCACCCTCA GTTCCGCCAGCTCATCATCAACCTCGCCCAGACAAATCATCGGGTCTCCACAAATATCCA GAGAAGAATATATGGCCATTCAACTAAGGTTGAGATTCGGCCTTTGAACGAGGAGAAAGC TGTTCAAGCTGCTGCTGATCTTATTGGGGAGCTCTTTGTTTTCTCGGTTGCTGGGGCTGC TGTAATCTTTGAGGTGCAAAGAAGCGCAAGGTCCGAGGCCCGAAAAGAGGAGGCTCGTAG AAACGAAGTTGAGGCGTTGAGGCAAAAGGAGGATCAGTTGGCTCGGGAGATAGAGATTGT GAAGCAGAAACTTGGCGAGATAGAGCGCCAAGCTAATTCTCGAGGTCTCTCTGGAGTTCT TTTCAGAAGCAGCAGTGCTCCAGACCAAACAAAGGCCTCATGAGTTTGATTAACTAGGAC AAAGGCAAGACTTCAATGGCAGCATCACAACCAAGTTAATCGATTACTGTCCTGCATTGC TTGTGATATTGCACATGGATGTGCAGATTTTTGAAGCACACATCTTGTAGCTTGTGTTTT TCCTGCCAATCACCATGGGAATGGGCCCATAGCTTGAGGTTTCGAACAACTTGTCGTATT TGAGGCTATTTTAACTCGAAAGCGTTGGAGAGCAGTTCCAAGAAGGGAACATCTGGCAAG TGCAAAGCAGAATTGTGCTATGTGTGTGTTGTCTGGCAATTCTCGCGAGTTGTCAACTTG CATCATAAGATAACTGTATGCCATGAACTTGTCAACATGGGAAGCAGATTGCTGCCAAAG TACTTCTGGTTTGTAACTCGATCATGTTCATATCAGTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_614#0      AATTTCCTAATATCCCCTACTTCCGATCTCAACGCCGGCATCGTCTCGCCGTGAACTCGC 60
consensus_614#1      -ATTTCCTAATATCCCCTACTTCCGATCTCAACGCCGGCATCGTCTCGCCGTGAACTCGC 59
                      ***********************************************************

consensus_614#0      CAAGACCTCCGC----------------------------------------GTGACGGG 80
consensus_614#1      CAAGACCTCCGCCGCCGCCGCCGCCTCATCTCCCAAGCTCCTCCGCGGCCGCGTGACGGG 119
                     ************                                        ********

consensus_614#0      AAGCGGAGCGGGAAAAGGAGGATCCATCCGTCCGGTACACGAGCTCCTCGTCGACGCCGC 140
consensus_614#1      AAGCGGAGCGGGAAAAGGAGGATCCATCCGTCCGGTACACGAGCTCCTCGTCGACGCCGC 179
                     ************************************************************

consensus_614#0      CGGGGGAGGGAGGGAGGGGGAGGATGATCCTTCCGCTGGCGAAGCTGGGGACGCTGGCGC 200
consensus_614#1      CGGGGGAGGGAGGGAGGGGGAGGATGATCCTTCCGCTGGCGAAGCTGGGGACGCTGGCGC 239
                     ************************************************************

consensus_614#0      TGAAGACGATGTCGAAGCCGATCGCCATCCGCCTCAAGACGGAGGCCAGCCGCCACCCTC 260
consensus_614#1      TGAAGACGATGTCGAAGCCGATCGCCATCCGCCTCAAGACGGAGGCCAGCCGCCACCCTC 299
                     ************************************************************

consensus_614#0      AGTTCCGCCAGCTCATCATCAACCTCGCCCAGACAAATCATCGGGTCTCCACAAATATCC 320
consensus_614#1      AGTTCCGCCAGCTCATCATCAACCTCGCCCAGACAAATCATCGGGTCTCCACAAATATCC 359
                     ************************************************************

consensus_614#0      AGAGAAGAATATATGGCCATTCAACTAAGGTTGAGATTCGGCCTTTGAACGAGGAGAAAG 380
consensus_614#1      AGAGAAGAATATATGGCCATTCAACTAAGGTTGAGATTCGGCCTTTGAACGAGGAGAAAG 419
                     ************************************************************

consensus_614#0      CTGTTCAAGCTGCTGCTGATCTTATTGGGGAGCTCTTTGTTTTCTCGTAGGTTGCTGGGG 440
consensus_614#1      CTGTTCAAGCTGCTGCTGATCTTATTGGGGAGCTCTTTGTTTTCTCG---GTTGCTGGGG 476
                     ***********************************************   **********

consensus_614#0      CTGCTGTAATCTTTGAGGTGCAAAGAAGCGCAAGGTCCGAGGCCCGAAAAGAGGAGGCTC 500
consensus_614#1      CTGCTGTAATCTTTGAGGTGCAAAGAAGCGCAAGGTCCGAGGCCCGAAAAGAGGAGGCTC 536
                     ************************************************************

consensus_614#0      GTAGAAACGAAGTTGAGGTATAAGCTCTGGAATGTCAATAGTTTTGTAACTTGAGATGAG 560
consensus_614#1      GTAGAAACGAAGTTGAGGCGTTGAGGCAAAAGGAGGATCAGTT----GGCTCGGGA--GA 590
                     ******************  *     *   *     *  ****      ** * **    

consensus_614#0      TTGTGTCTTCGCAGGGTAATGGTTTTCTTTTTGTTAACGTCCACATATTTCATTTCAGTG 620
consensus_614#1      TAGAG--ATTGTGAAGCAGAAACTTGGCGAGATAGAGCGCCAAGCTAATTC---TCGAGG 645
                     * * *   * *    * *     **          * ** * *  ** ***   **   *

consensus_614#0      ACTATATTCATTTATGTATCTATAATCTATAAATAGGAGCCCCCCCAAAAAAATCACATA 680
consensus_614#1      TCTCTCTGGAGTTCT---------TTTCAGAAGCAGCAGTGCTCC-AGACCAAACAAAGG 695
                      ** * *  * ** *          *  * **  ** **  * ** * *  ** ** *  

consensus_614#0      GCTCATTGGTATATCCAAACAACAAATTGTCTGATGCAGCTATTCAATCTTAGGATTATT 740
consensus_614#1      CCTCATGAGTTTGATTAACTAGGACA------AAGGCAAGACTTCAATGGCAGCATCA-- 747
                      *****  ** *    **  *  * *       * ***    ******   ** ** *  

consensus_614#0      CTACCAAATGTTACTAAAAAAATTAATCAGTTCAATGGCCTGGGAATAATTGGGGATGAA 800
consensus_614#1      CAACCAAGTT------AATCGATTACTGTCCTGCATTGCTTGTGAT--ATTGCACATGGA 799
                     * ***** *       **   **** *    *  ** ** ** **   ****   *** *

consensus_614#0      TAGCTATTGTTTACATTGCTGAGAATCGTCAGGATAGCTCTAATATTTCAGTGAAGTCTT 860
consensus_614#1      T-------GTGCAGATTTTTGA--------AGCACACATCTTGTAGCT---TGTGTTTTT 841
                     *       **  * ***  ***        ** * *  ***  **  *   **   * **

consensus_614#0      GCAAGTGATAACAAACAAGGCAATGCTTGGGCTATATCTTGGATACAGTTGTATTCTTGG 920
consensus_614#1      CC---TGCCAATCACCATGGGAATG---GGCCCATAGCTTGAGG----------TTTCGA 885
                      *   **  **  * ** ** ****   ** * *** ****             * * * 

consensus_614#0      AGTACACTCCAGTATAGGAGTTATTACATTCTAAATAATGTGTAGAAGGACTGTAGCAGC 980
consensus_614#1      ACAACTTGTCGTATTTGAGGCTATTTTAACTCGAAAGCGTTGGAGAGCAGTTCCAAGAAG 945
                     *  **    *    * *  * ****  *     **     ** ***     *  *  *  

consensus_614#0      GAAGTGCTCTAATATTGGATGACAGCGATATAAGAGACACAAAGTGCTTACCTTTATTGT 1040
consensus_614#1      GGAACATCTGGCAAGTGCAAAGCAGAATTGTGCTATGTGTGTGTTGTCTGGCA--ATTCT 1003
                     * *          * ** *   ***   * *   *         **  *  *   *** *

consensus_614#0      CTGAAGTTATAAATCAGTCAAATGTAAGTAGACTGTCTTGTCTGAAGTCTTGTA-GTAAT 1099
consensus_614#1      CGCGAGTTGTCAACTTGC--ATCATAAGATAACTGTATGCCATGAACTTGTCAACATGGG 1061
                     *   **** * **   *   *   ****   ***** *    **** *  *  *  *   

consensus_614#0      GATTCAATTATGG--AGGATAGCAACTATTTGCAACAAATAATCATATGTAAACCTGTAC 1157
consensus_614#1      AAGCAGATTGCTGCCAAAGTACTTCTGGTTTGTAACT--CGATCATGTTCATATCAGTGT 1119
                      *    ***   *  *   **       **** ***     ***** *  * * * **  

consensus_614#0      TGCATTTTCACCAAACTGTTGCTATGAAAACCAAAAATACATTTATACCAAAGCTATGCT 1217
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      ACACACCTTGCAGTACAGTAGCCCTAATGGGTTGTAAAAGGCCATAGCAAGCTGCAACCA 1277
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      TACAGAGTGCTGCAGACTTTGCCTGCAGTTAGTATCAGGCACTACACCTTAATTCTAAAC 1337
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      CAGGGCTATTGTAGTGTTATCATGGCCTTTTCTGAACATTCAATAGGTATCAGATCTGTG 1397
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      AGCAATAATATGGCAGCAGGCCAACTGTTCTTTTTTTTCCTCTAAAATTGGCCATTTATA 1457
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      GTTTTTGTTGCATTGCATATTTTTTGACCAATTTACATTTTGCATAAATAGTCTAGAATT 1517
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      TGATGTTTCAGCAATATCACGTCGTTGACTTGTTCTTTGCTGTTTATTTTCATTGTTATG 1577
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      CTTTATATCATTCAATATGGACCAGCTTTGTGGATTGTCTTTTTCCTGTCCAAGCAAGTG 1637
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      ACAGTTACCAGACAGATCTGTTTGGTGTATGCAGAAGAGGTAGTACTCTTCTCTCTGAAA 1697
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      AGGACAAGAGAACAGATAGCAGTCTGAAACACTGGAAATATACCTTAGGTTGTGGCTTTG 1757
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      TGAGAACCAGAGATGAATGAAACAGAATCAAGTCCAAGAGTAATGTATTGCTATGGTATC 1817
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      CCATAAATCCCAAGTGGAAATGAAATTCCTATATGTACCATATGAAACTGAAGTCTCTGC 1877
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      AACAAAAACTCACTATCAATAGGTGTTGACCAGAGAACATTTGATGTCAACATTATCTTC 1937
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      AATGTGCATGAGTGGCTCTGGTTAGACAATGCATTGCAGTAGCATGTATTCATAAATCAT 1997
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      CTGGCCTTTGACTCCAGTTGTTAATGTGCTTTGCCATTATGTGACCGTATATCTTCAGTC 2057
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      TTGCTGTTGGTGATGTTATTGACTTGTGTTGCTATTTTTTGTCGATTATTTCTATCATTT 2117
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      TATGAGTTTGAAAAAAAAACATTTATTTTGTAGGCGTTGAGGCAAAAGGAGGATCAGTTG 2177
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      GCTCGGGAGATAGAGATTGTGAAGCAGAAACTTGGCGAGATAGAGCGCCAAGCTAATTCT 2237
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      CGAGGTCTCTCTGGAGTTCTTTTCAGAAGCAGCAGTGCTCCAGACCAAACAAAGGCCTCA 2297
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      TGAGTTTGATTAACTAGGACAAAGGCAAGACTTCAATGGCAGCATCACAACCAAGTTAAT 2357
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      CGATTACTGTCCTGCATTGCTTGTGATATTGCACATGGATGTGCAGATTTTTGAAGCACA 2417
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      CATCTTGTAGCTTGTGTTTTTCCTGCCAATCACCATGGGAATGGGCCCATAGCTTGAGGT 2477
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      TTCGAACAACTTGTCGTATTTGAGGCTATTTTAACTCGAAAGCGTTGGAGAGCAGTTCCA 2537
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      AGAAGGGAACATCTGGCAAGTGCAAAGCAGAATTGTGCTATGTGTGTGTTGTCTGGCAAT 2597
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      TCTCGCGAGTTGTCAACTTGCATCATAAGATAACTGTATGCCATGAACTTGTCAACATGG 2657
consensus_614#1      ------------------------------------------------------------
                                                                                 

consensus_614#0      GAAGCA 2663
consensus_614#1      ------
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)