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Oryza sativa
cluster # 615 cluster # 615       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_615#0 length = 1244 sequences # 2  

consensusID : consensus_615#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1244
fasta sequence
                              [AAAATGGCGACCAAAGTGCACGCCCGCCGCCTCTAGCGCCGACCGCCTCCCGTTCCCCTTCCCCACTCCGTCCCGGCAGCTACCTCCGCTTTCCACCACGCCGGCCGATCCGCCTCCCCAACCCTATCGCCGGCAGGCGCGCCACGCCAGGTTCCGGGCTCGGAGACACCGCACGCTCCGCCCGATGGGCACCCCCGGGCCGGAGCTCGCCGCTCTCGCGATTCGCCGCAGCGGCGGCCGCCTGTTCGAGCGGTAGGGAGGGACTCGTCTCCCCGCCTCTCCTTGTCGTGGACTCGTGGTAGCGGGGGTGGGAGGAGCCAGAGAGGCTGGGGGCAGGGAGGGAGGATGCTGGGGTCGGGCCTGAATCTCGTCAGCGCGGCGCTCGGCTTCGGCATGACCGCCGCCTTTGTCGCGTTCGTCTGCGCGCGGTTCGTCTGCTGCCGCGCCCGCCGCGCGGACGCTAGCGCGTCACGGCCACACCCCTCGCCGGTGGACTTCGACGCGGACTTCCCCTCGGATTTCGATCGCCCGATAGAGCATTCCCGCAGTGGGTTGGAACCATTGGCTGTTGCTGCAATTCCTACAATGAAGTATAACTGTGAAGCTTTCCATTCGGAAGATGACACCCAGTGCTCCATATGTTTAAGTGAATACAAGGAGAAGGACATTCTAAGAATTGTACCTATTTGTCATCATAACTTTCACCTTTACTGCTTAGATGCATGGTTGCTGAAGCAGACTACTTGCCCAATATGCCGGATCTCATTGAAAGAACTGCCTGATGGAAAATCGACCGTATCCTCTGCTCCTACCATGTCTCAACCCCCCACCCTCCCTGAGAGTTCTGTTAATCCAACATCTCATTTCCTCCCAGTTCATCAAGAACACAGAAGCCACCAGGATGGCCCAGATATGCCAGAATCTGTAGAGGTGGTTATTGAAATCCGACAGTGACTACGGCGGAATAGTGCAAGACAAGAATTTGCAGTTTAAATTCTTTGTACGCCCTTCATTGCATTGTTTGTCGCAGTTTCAAAATGTTTGAAGTCAAAATTATATGTGGTCCCTTTGCAAGTTGTAGACTAGAGAAGTCAGTCATACAATCCACATTATCATATGTTCTTTTTAATATATGTTGTATATTGCAAGCTAAGTAAAAATACCGATAAGATCTACTGATATAGGAGTAGAGCTTATTTACTGTTGAGTCCCTAATTTTTTTATGAGTGAATTTCAGCAGGGAC]

[+] EMBL AK099520             [AAAATGGCGACCAAAGTGCACGCCCGCCGCCTCTAGCGCCGACCGCCTCCCGTTCCCCTTCCCCACTCCGTCCCGGCAGCTACCTCCGCTTTCCACCACGCCGGCCGATCCGCCTCCCCAACCCTATCGCCGGCAGGCGCGCCACGCCAGGTTCCGGGCTCGGAGACACCGCACGCTCCGCCCGATGGGCACCCCCGGGCCGGAGCTCGCCGCTCTCGCGATTCGCCGCAGCGGCGGCCGCCTGTTCGAGCGGTAGGGAGGGACTCGTCTCCCCGCCTCTCCTTGTCGTGGACTCGTGGTAGCGGGGGTGGGAGGAGCCAGAGAGGCTGGGGGCAGGGAGGGAGGATGCTGGGGTCGGGCCTGAATCTCGTCAGCGCGGCGCTCGGCTTCGGCATGACCGCCGCCTTTGTCGCGTTCGTCTGCGCGCGGTTCGTCTGCTGCCGCGCCCGCCGCGCGGACGCTAGCGCGTCACGGCCACACCCCTCGCCGGTGGACTTCGACGCGGACTTCCCCTCGGATTTCGATCGCCCGATAGAGCATTCCCGCAGTGGGTTGGAACCATTGGCTGTTGCTGCAATTCCTACAATGAAGTATAACTGTGAAGCTTTCCATTCGGAAGATGACACCCAGTGCTCCATATGTTTAAGTGAATACAAGGAGAAGGACATTCTAAGAATTGTACCTATTTGTCATCATAACTTTCACCTTTACTGCTTAGATGCATGGTTGCTGAAGCAGACTACTTGCCCAATATGCCGGATCTCATTGAAAGAACTGCCTGATGGAAAATCGACCGTATCCTCTGCTCCTACCATGTCTCAACCCCCCACCCTCCCTGAGAGTTCTGTTAATCCAACATCTCATTTCCTCCCAGTTCATCAAGAACACAGAAGCCACCAGGATGGCCCAGATATGCCAGAATCTGTAGAGGTGGTTATTGAAATCCGACAGTGACTACGGCGGAATAGTGCAAGACAAGAATTTGCAGTTTAAATTCTTTGTACGCCCTTCATTGCATTGTTTGTCGCAGTTTCAAAATGTTTGAAGTCAAAATTATATGTGGTCCCTTTGCAAGTTGTAGACTAGAGAAGTCAGTCATACAATCCACATTATCATATGTTCTTTTTAATATATGTTGTATATTGCAAGCTAAGTAAAAATACCGATAAGATCTACTGATATAGGAGTAGAGCTTATTTACTGTTGAGTCCCTAATTTTTTTATGAGTGAATTTCAGCAGGGAC]
[+] EMBL AK061021             [                                                 CCGTTCCCCTTCCCCACTCCGTCCCGGCAGCTACCTCCGCTTTCCACCACGCCGGCCGATCCGCCTCCCCAACCCTATCGCCGGCAGGCGCGCCACGCCAGGTTCCGGGCTCGGAGACACCGCACGCTCCGCCCGATGGGCACCCCCGGGCCGGAGCTCGCCGCTCTCGCGATTCGCCGCAGCGGCGGCTGCCTGTTCGAGCGGTAGGGAGGGACTCGTCTCCCCGCCTCTCCTTGTCGTGGACTCGTGGTAGCGGGGGTGGGAGGAGCCAGAGAGGCTGGGGGCAGGGAGGGAGGATGCTGGGGTCGGGCCTGAATCTCGTCAGCGCGGCGCTCGGCTTCGGCATGACCGCCGCCTTTGTCGCGTTCGTCTGCGCGCGGTTCGTCTGCTGCCGCGCCCGCCGCGCGGACGCTAGCGCGTCACGGCCACACCCCTCGCCGGTGGACTTCGACGCGGACTTCCCCTCGGATTTCGATCGCCCGATAGAGCATTCCCGCAGTGGGTTGGAACCATTGGCTGTTGCTGCAATTCCTACAATGAAGTATAACTGTGAAGCTTTCCATTCGGAAGATGACACCCAGTGCTCCATATGTTTAAGTGAATACAAGGAGAAGGACATTCTAAGAATTGTACCTATTTGTCATCATAACTTTCACCTTTACTGCTTAGATGCATGGTTGCTGAAGCAGACTACTTGCCCAATATGCCGGATCTCATTGAAAGAACTGCCTGATGGAAAATCGACCGTATCCTCTGCTCCTACCATGTCTCAACCCCCCACCCTCCCTGAGAGTTCTGTTAATCCAACATCTCATTTCCTCCCAGTTCATCAAGAACACAGAAGCCACCAGGATGGCCCAGATATGCCAGAATCTGTAGAGGTGGTTATTGAAATCCGACAGTGACTACGGCGGAATAGTGCAAGACAAGAATTTGCAGTTTAAATTCTTTGTACGCCCTTCATTGCATTGTTTGTCGCAGTTTCAAAATGTTTGAAGTCAAAATTATATGTGGTCCCTTTGCAAGTTGTAGACTAGAGAAGTCAGTCATACAATCCACATTATCATATGTTCTTTTTAATATATGTTGTAT                                                                                                       ]


>consensus_615#0 AAAATGGCGACCAAAGTGCACGCCCGCCGCCTCTAGCGCCGACCGCCTCCCGTTCCCCTT CCCCACTCCGTCCCGGCAGCTACCTCCGCTTTCCACCACGCCGGCCGATCCGCCTCCCCA ACCCTATCGCCGGCAGGCGCGCCACGCCAGGTTCCGGGCTCGGAGACACCGCACGCTCCG CCCGATGGGCACCCCCGGGCCGGAGCTCGCCGCTCTCGCGATTCGCCGCAGCGGCGGCCG CCTGTTCGAGCGGTAGGGAGGGACTCGTCTCCCCGCCTCTCCTTGTCGTGGACTCGTGGT AGCGGGGGTGGGAGGAGCCAGAGAGGCTGGGGGCAGGGAGGGAGGATGCTGGGGTCGGGC CTGAATCTCGTCAGCGCGGCGCTCGGCTTCGGCATGACCGCCGCCTTTGTCGCGTTCGTC TGCGCGCGGTTCGTCTGCTGCCGCGCCCGCCGCGCGGACGCTAGCGCGTCACGGCCACAC CCCTCGCCGGTGGACTTCGACGCGGACTTCCCCTCGGATTTCGATCGCCCGATAGAGCAT TCCCGCAGTGGGTTGGAACCATTGGCTGTTGCTGCAATTCCTACAATGAAGTATAACTGT GAAGCTTTCCATTCGGAAGATGACACCCAGTGCTCCATATGTTTAAGTGAATACAAGGAG AAGGACATTCTAAGAATTGTACCTATTTGTCATCATAACTTTCACCTTTACTGCTTAGAT GCATGGTTGCTGAAGCAGACTACTTGCCCAATATGCCGGATCTCATTGAAAGAACTGCCT GATGGAAAATCGACCGTATCCTCTGCTCCTACCATGTCTCAACCCCCCACCCTCCCTGAG AGTTCTGTTAATCCAACATCTCATTTCCTCCCAGTTCATCAAGAACACAGAAGCCACCAG GATGGCCCAGATATGCCAGAATCTGTAGAGGTGGTTATTGAAATCCGACAGTGACTACGG CGGAATAGTGCAAGACAAGAATTTGCAGTTTAAATTCTTTGTACGCCCTTCATTGCATTG TTTGTCGCAGTTTCAAAATGTTTGAAGTCAAAATTATATGTGGTCCCTTTGCAAGTTGTA GACTAGAGAAGTCAGTCATACAATCCACATTATCATATGTTCTTTTTAATATATGTTGTA TATTGCAAGCTAAGTAAAAATACCGATAAGATCTACTGATATAGGAGTAGAGCTTATTTA CTGTTGAGTCCCTAATTTTTTTATGAGTGAATTTCAGCAGGGAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)