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Oryza sativa
cluster # 6170 cluster # 6170       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6170#0 length = 2246 sequences # 3  
consensus_6170#1 length = 486 sequences # 1  

consensusID : consensus_6170#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2246
fasta sequence
                              [CTGGCACAGCTAATCCAAATCCTCCTCTTTTTCTTGTTTTTTTTTTTCTTTCTTCGTCTTCTCCAACGCCCAAAGTAAAACAAAGGAAAAAAGAAAAGCCGCATCCAAGAACGCACCAGAAATTTCGGCGACGGTTGCGCGCGAATCCATCCATCCACCGGCGGTCGGAGGGCGGCGGCGGCGGAGCAATTCCGCCCAACCAAGCGGCGGAGTCGGTGCGGGCGAAATTTCCGGGTTGGTGCGCGGGGCTTGGGTTGGTGGTGGTGGACTGGTGGTGGTGTGTGTTCTTGGGAGTGGATCTGGCAGGAGGCTGGCGATGGGGAGGCGGGAGTAGGGGGAGCGGCGGATTGGAGTGGGAGGCGCGGTGTTGGGGGCTCCCATGGGCGGATGCTTCTCGCTGGAGGAGCACCGGCTCCAGGGCAAGACAGAAGCTGGTGGGCCAGATGGGTTAAGGAAATGCAAATCTGATTCTAAAGCTACAGCAAGTGTCCTTGCCCCTCCAAAAGATGTGGAGGACCTGCAAATCGAAGGATACGGAAATGTTAATATTTTCACATATAATGAACTAAGAGCAGCCACAAAAAACTTCCGGCCTGACCAAATTCTTGGAGAGGGTGGGTTTGGTGTTGTTTACAAAGGTGTAATTGATGAAAATGTTAGAGCGGGCTTTCCATCCACACAAGTTGCTGTGAAAGAATTAAACCCAGAGGGATTTCAGGGTGACAAGGAATGGTTGGCAGAAGTCAACTACCTTGGGCAACTTAGCCATCCAAATCTAGTCGAACTGATTGGGTATTGCTGTGAAGGCTCTCATAGACTGCTTGTTTACGAGTACATGGCTTGCGGCAGCCTTGAAAAGCATCTTTTTCGCCGGGTTTGCCTTAATATGCCATGGTCTACTCGAATGAAGATTGCTCTAGGTGCTGCAAGGGGGCTGGAATATCTTCACGGAGCTGAGAGATCAATTATATATCGAGATTTCAAAACATCAAACATCTTGTTAGATGCGGATTATAATGCCAAGCTGTCAGACTTTGGCCTAGCACGAACTGGACCTAGTGGAGACCAAACCCATGTATCAACTCGGGTCATGGGTACTTATGGCTATGCAGCTCCTGAATATGTCATGACAGGCCATCTGACAGCACGAAGTGGTGTCTATGGCTTTGGTGTCGTCCTTCTCGAGATGATCATAGGCAGGAGGGCTGTGGACAAGAGCCGGCCTAGCCGTGAGCACAACCTAGTTGAGTGGGCACGTCCCCTCCTCGTGCACAATCGGAAGCTGTTCAGGATTATCGATCCAAGAATGGAAGGGCAGTACTCCACCAAGGCTGCCATTGAGGTGGCAGGCCTTGCGTACCGATGCTTGAGCCAGAATCCCAAAGGACGACCCACCATGAGCCAGGTTGTTGAGACCTTTGAGGCTGTGCAAAACATGCCTGAATG-CCAAGACATACTC-TTGCAGAACTGCATGACGGGTGCAGTGACACTCTACGAGGTTG-CAAAGGACCCTACGGAGAGCGTCGAGCCGGAGAAGATAAAACAAGAACAACCAGCAGCAAAAACGGTCACCGTGGCACCGGCACCGGTAAATGGAAAACCCGTGCCTCAGAGCAGGAGAACACGGCCAGGGAATGGCCGGAGCAAGAGCGAGCCGTCTTTGGAATGCAAGCTGTACATCCCATCTCCAGACTCTGATGGCCAGCAGCCAGGCCTGGAGGCATTGTCATCCCCTTCCAGAGATGGAAGCATAAAGGATCCACCGGACGAGGATTTGTACAAGATATAAAAGTCACACAGAAGTTTTTTATGACGATTCAAGTTTTCGCTACCGGCGATTTCGCATTGCCATCCATCCATCTTGTTGTCAAGATCGATCAGAGTCAAAGTTGGTGTTAAAATTTTTTCTGATGGCGGAAGAACTCTACCTCGTTAGGTTTCTTGCTGTTCCGACTAGCAATTGTATGTAGAGAGGAGCGTTGTGGAAAGCATTTGTAATGTGAGATGCCTGCCGCGACGAAAAGTTCGTGTTGTAAACTTGAAACCATTCTCTGGGAAGAGGAAGATCCACATCATAATCGATGTGTCAGTGTTGTTGTTGCTCGAGTGTTTTTGACTTTTCTGTATAGATGATGATGTCCTTGCAAACTTGGTACAGTTCTACAGGAAATCAACAAGAAGATGGAAAAATATAAGATGAATCAGTGTCCGTTTGTTGACAGTTTGTTTTTGGAGTATGGTTTTGT]

[+] EMBL AK100479             [CTGGCACAGCTAATCCAAATCCTCCTCTTTTTCTTGTTTTTTTTTTTCTTTCTTCGTCTTCTCCAACGCCCAAAGTAAAACAAAGGAAAAAAGAAAAGCCGCATCCAAGAACGCACCAGAAATTTCGGCGACGGTTGCGCGCGAATCCATCCATCCACCGGCGGTCGGAGGGCGGCGGCGGCGGAGCAATTCCGCCCAACCAAGCGGCGGAGTCGGTGCGGGCGAAATTTCCGGGTTGGTGCGCGGGGCTTGGGTTGGTGGTGGTGGACTGGTGGTGGTGTGTGTTCTTGGGAGTGGATCTGGCAGGAGGCTGGCGATGGGGAGGCGGGAGTAGGGGGAGCGGCGGATTGGAGTGGGAGGCGCGGTGTTGGGGGCTCCCATGGGCGGATGCTTCTCGCTGGAGGAGCACCGGCTCCAGGGCAAGACAGAAGCTGGTGGGCCAGATGGGTTAAGGAAATGCAAATCTGATTCTAAAGCTACAGCAAGTGTCCTTGCCCCTCCAAAAGATGTGGAGGACCTGCAAATCGAAGGATACGGAAATGTTAATATTTTCACATATAATGAACTAAGAGCAGCCACAAAAAACTTCCGGCCTGACCAAATTCTTGGAGAGGGTGGGTTTGGTGTTGTTTACAAAGGTGTAATTGATGAAAATGTTAGAGCGGGCTTTCCATCCACACAAGTTGCTGTGAAAGAATTAAACCCAGAGGGATTTCAGGGTGACAAGGAATGGTTGGCAGAAGTCAACTACCTTGGGCAACTTAGCCATCCAAATCTAGTCGAACTGATTGGGTATTGCTGTGAAGGCTCTCATAGACTGCTTGTTTACGAGTACATGGCTTGCGGCAGCCTTGAAAAGCATCTTTTTCGCCGGGTTTGCCTTAATATGCCATGGTCTACTCGAATGAAGATTGCTCTAGGTGCTGCAAGGGGGCTGGAATATCTTCACGGAGCTGAGAGATCAATTATATATCGAGATTTCAAAACATCAAACATCTTGTTAGATGCGGATTATAATGCCAAGCTGTCAGACTTTGGCCTAGCACGAACTGGACCTAGTGGAGACCAAACCCATGTATCAACTCGGGTCATGGGTACTTATGGCTATGCAGCTCCTGAATATGTCATGACAGGCCATCTGACAGCACGAAGTGGTGTCTATGGCTTTGGTGTCGTCCTTCTCGAGATGATCATAGGCAGGAGGGCTGTGGACAAGAGCCGGCCTAGCCGTGAGCACAACCTAGTTGAGTGGGCACGTCCCCTCCTCGTGCACAATCGGAAGCTGTTCAGGATTATCGATCCAAGAATGGAAGGGCAGTACTCCACCAAGGCTGCCATTGAGGTGGCAGGCCTTGCGTACCGATGCTTGAGCCAGAATCCCAAAGGACGACCCACCATGAGCCAGGTTGTTGAGACCTTTGAGGCTGTGCAAAACATGCCTGAATG CCAAGACATACTC TTGCAGAACTGCATGACGGGTGCAGTGACACTCTACGAGGTTG CAAAGGACCCTACGGAGAGCGTCGAGCCGGAGAAGATAAAACAAGAACAACCAGCAGCAAAAACGGTCACCGTGGCACCGGCACCGGTAAATGGAAAACCCGTGCCTCAGAGCAGGAGAACACGGCCAGGGAATGGCCGGAGCAAGAGCGAGCCGTCTTTGGAATGCAAGCTGTACATCCCATCTCCAGACTCTGATGGCCAGCAGCCAGGCCTGGAGGCATTGTCATCCCCTTCCAGAGATGGAAGCATAAAGGATCCACCGGACGAGGATTTGTACAAGATATAAAAGTCACACAGAAGTTTTTTATGACGATTCAAGTTTTCGCTACCGGCGATTTCGCATTGCCATCCATCCATCTTGTTGTCAAGATCGATCAGAGTCAAAGTTGGTGTTAAAATTTTTTCTGATGGCGGAAGAACTCTACCTCGTTAGGTTTCTTGCTGTTCCGACTAGCAATTGTATGTAGAGAGGAGCGTTGTGGAAAGCATTTGTAATGTGAGATGCCTGCCGCGACGAAAAGTTCGTGTTGTAAACTTGAAACCATTCTCTGGGAAGAGGAAGATCCACATCATAATCGATGTGTCAGTGTTGTTGTTGCTCGAGTGTTTTTGACTTTTCTGTATAGATGATGATGTCCTTGCAAACTTGGTACAGTTCTACAGGAAATCAACAAGAAGATGGAAAAATATAAGATGAATCAGTGTCCGTTTGTTGACAGTTTGTTTTTGGAGTATGGTTTTGT]
[+] EMBL AU085863             [                 AATCCTCCTCTTTTTCTTG TTTTTTTTTTCTTTCTTCGTCTTCTCCAACGCCCAAAGTAAAACAAAGGAAAAAAGAAAAGCCGCATCCAAGAACGCACCAGAAATTTCGGCGACGGTTGCGCGCGAATCCATCCATCCACCGGCGGTCGGAGGGCGGCGGCGGCGGAGCAATTCCGCCCAACCAAGCGGCGGAGTCGGTGCGGGCGAAATTTCCGGGTTGGTGCGCGGGGCTTGGGTTGGTGGTGGTGGACTGGTGGTGGTGTGTGTTCTTGGGAGTGGATCTGGCAGGAGGCTGGCGATGGGGAGGCGGGAGTAGGGGGAGCGGCGGATTGGAGTNGGAAGCGCGGTGTTGGGGGCTCCCATGGGCGGATGCTTCTCGCTGGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C98701               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CATGCTTGAATGCCCAAGACATACTCTTTGCAGAACTGCATGACGGTTGCAGTGACACTCTACGAGGTTGCCAAAGGACCCTACGGAGAGCGTCGAGCCGGAGAAGATAAANCAAGAACAACCAGCAGCAAAAACGGTCACCGTGGCACCGGCACCGGTAAATGGAAAACCCGTGCCTCAGAGCAGGAGAACACGGCCAGGGAATGGCCGGAGCAAGAGCGAGCCGTCTTTGGAATGCAAGCTGTACATCCCATCTCCAGACTCTGATGGCCAGCAGCCAGGCCTGGAGGCATTGTCATCCCCTTCCAGAGATGGAAGCATAAAGGATCCACCGGACGAGGATTTGTACAAGATATAAAAGTCACACAGAAGTTTTTTATGACGATTCAAGTTTTCGCTACCGGCGATTTCGCATTGCCATCCATCCATCTTGTTGTCAAGATCGATCAGAGTCAAAGTTGGTGTTAAAATTTTTTCTGATGGCGGAAGAACTCTACCTCGTTAGGTTTCTTGCTGTTCCGACTAGCAATTGTATGTAGAGAGGAGCGTTGTGGAAAGCATTTGTAATGTGAGATGCCTGCCGCGACGAAAAGTTCGTGTTGTAAACTTGAAACCATTCTCTGGGAAGAGGAAGATCCACATCATAAaaa                                                                                                                                                                     ]


>consensus_6170#0 CTGGCACAGCTAATCCAAATCCTCCTCTTTTTCTTGTTTTTTTTTTTCTTTCTTCGTCTT CTCCAACGCCCAAAGTAAAACAAAGGAAAAAAGAAAAGCCGCATCCAAGAACGCACCAGA AATTTCGGCGACGGTTGCGCGCGAATCCATCCATCCACCGGCGGTCGGAGGGCGGCGGCG GCGGAGCAATTCCGCCCAACCAAGCGGCGGAGTCGGTGCGGGCGAAATTTCCGGGTTGGT GCGCGGGGCTTGGGTTGGTGGTGGTGGACTGGTGGTGGTGTGTGTTCTTGGGAGTGGATC TGGCAGGAGGCTGGCGATGGGGAGGCGGGAGTAGGGGGAGCGGCGGATTGGAGTGGGAGG CGCGGTGTTGGGGGCTCCCATGGGCGGATGCTTCTCGCTGGAGGAGCACCGGCTCCAGGG CAAGACAGAAGCTGGTGGGCCAGATGGGTTAAGGAAATGCAAATCTGATTCTAAAGCTAC AGCAAGTGTCCTTGCCCCTCCAAAAGATGTGGAGGACCTGCAAATCGAAGGATACGGAAA TGTTAATATTTTCACATATAATGAACTAAGAGCAGCCACAAAAAACTTCCGGCCTGACCA AATTCTTGGAGAGGGTGGGTTTGGTGTTGTTTACAAAGGTGTAATTGATGAAAATGTTAG AGCGGGCTTTCCATCCACACAAGTTGCTGTGAAAGAATTAAACCCAGAGGGATTTCAGGG TGACAAGGAATGGTTGGCAGAAGTCAACTACCTTGGGCAACTTAGCCATCCAAATCTAGT CGAACTGATTGGGTATTGCTGTGAAGGCTCTCATAGACTGCTTGTTTACGAGTACATGGC TTGCGGCAGCCTTGAAAAGCATCTTTTTCGCCGGGTTTGCCTTAATATGCCATGGTCTAC TCGAATGAAGATTGCTCTAGGTGCTGCAAGGGGGCTGGAATATCTTCACGGAGCTGAGAG ATCAATTATATATCGAGATTTCAAAACATCAAACATCTTGTTAGATGCGGATTATAATGC CAAGCTGTCAGACTTTGGCCTAGCACGAACTGGACCTAGTGGAGACCAAACCCATGTATC AACTCGGGTCATGGGTACTTATGGCTATGCAGCTCCTGAATATGTCATGACAGGCCATCT GACAGCACGAAGTGGTGTCTATGGCTTTGGTGTCGTCCTTCTCGAGATGATCATAGGCAG GAGGGCTGTGGACAAGAGCCGGCCTAGCCGTGAGCACAACCTAGTTGAGTGGGCACGTCC CCTCCTCGTGCACAATCGGAAGCTGTTCAGGATTATCGATCCAAGAATGGAAGGGCAGTA CTCCACCAAGGCTGCCATTGAGGTGGCAGGCCTTGCGTACCGATGCTTGAGCCAGAATCC CAAAGGACGACCCACCATGAGCCAGGTTGTTGAGACCTTTGAGGCTGTGCAAAACATGCC TGAATGCCAAGACATACTCTTGCAGAACTGCATGACGGGTGCAGTGACACTCTACGAGGT TGCAAAGGACCCTACGGAGAGCGTCGAGCCGGAGAAGATAAAACAAGAACAACCAGCAGC AAAAACGGTCACCGTGGCACCGGCACCGGTAAATGGAAAACCCGTGCCTCAGAGCAGGAG AACACGGCCAGGGAATGGCCGGAGCAAGAGCGAGCCGTCTTTGGAATGCAAGCTGTACAT CCCATCTCCAGACTCTGATGGCCAGCAGCCAGGCCTGGAGGCATTGTCATCCCCTTCCAG AGATGGAAGCATAAAGGATCCACCGGACGAGGATTTGTACAAGATATAAAAGTCACACAG AAGTTTTTTATGACGATTCAAGTTTTCGCTACCGGCGATTTCGCATTGCCATCCATCCAT CTTGTTGTCAAGATCGATCAGAGTCAAAGTTGGTGTTAAAATTTTTTCTGATGGCGGAAG AACTCTACCTCGTTAGGTTTCTTGCTGTTCCGACTAGCAATTGTATGTAGAGAGGAGCGT TGTGGAAAGCATTTGTAATGTGAGATGCCTGCCGCGACGAAAAGTTCGTGTTGTAAACTT GAAACCATTCTCTGGGAAGAGGAAGATCCACATCATAATCGATGTGTCAGTGTTGTTGTT GCTCGAGTGTTTTTGACTTTTCTGTATAGATGATGATGTCCTTGCAAACTTGGTACAGTT CTACAGGAAATCAACAAGAAGATGGAAAAATATAAGATGAATCAGTGTCCGTTTGTTGAC AGTTTGTTTTTGGAGTATGGTTTTGT



consensusID : consensus_6170#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 486
fasta sequence
                              [CTATGCAGCTCCTGAATATGTCATGACAGGCCATCTGACAGCACGAAGTGATGTCTATGGCTTTGGTGTCGTCCTTCTCGAGATGATCATAGGCAGGAGGGCTGTGGACAAGAGCCGGCCTAGCCGTGAGCACAACCTAGTTGAGTGGGCACGTCCCCTCCTCGTGCACAATCGGAAGCTGTTCAGGATTATCGATCCAAGAATGGAAGGGCAGTACTCCACCAAGGCTGCCATTGAGGTGGCAGGCCTTGCGTACCGATGCTTGAGCCAGAATCCCAAAGGACGACCCACCATGAGCCAGGTTGTTGAGACCTTTGAGGCTGTGCAAAACATGCCTGAATGCCAAGACATACTCTTGCAGAACTGCATGACGGGTGCAGTGACACTCTACGAGGTTGCAAAGGACCCTACGGAGAGCGTCGAGCCGGAGAAGATAAAACAAGAACANNNNNGCAGCAAAACGNTNNNCGTGGCNNNNNNNNCNGT]

[+] EMBL CF196424             [CTATGCAGCTCCTGAATATGTCATGACAGGCCATCTGACAGCACGAAGTGATGTCTATGGCTTTGGTGTCGTCCTTCTCGAGATGATCATAGGCAGGAGGGCTGTGGACAAGAGCCGGCCTAGCCGTGAGCACAACCTAGTTGAGTGGGCACGTCCCCTCCTCGTGCACAATCGGAAGCTGTTCAGGATTATCGATCCAAGAATGGAAGGGCAGTACTCCACCAAGGCTGCCATTGAGGTGGCAGGCCTTGCGTACCGATGCTTGAGCCAGAATCCCAAAGGACGACCCACCATGAGCCAGGTTGTTGAGACCTTTGAGGCTGTGCAAAACATGCCTGAATGCCAAGACATACTCTTGCAGAACTGCATGACGGGTGCAGTGACACTCTACGAGGTTGCAAAGGACCCTACGGAGAGCGTCGAGCCGGAGAAGATAAAACAAGAACANNNNNGCAGCAAAACGNTNNNCGTGGCNNNNNNNNCNGT]


>consensus_6170#1 CTATGCAGCTCCTGAATATGTCATGACAGGCCATCTGACAGCACGAAGTGATGTCTATGG CTTTGGTGTCGTCCTTCTCGAGATGATCATAGGCAGGAGGGCTGTGGACAAGAGCCGGCC TAGCCGTGAGCACAACCTAGTTGAGTGGGCACGTCCCCTCCTCGTGCACAATCGGAAGCT GTTCAGGATTATCGATCCAAGAATGGAAGGGCAGTACTCCACCAAGGCTGCCATTGAGGT GGCAGGCCTTGCGTACCGATGCTTGAGCCAGAATCCCAAAGGACGACCCACCATGAGCCA GGTTGTTGAGACCTTTGAGGCTGTGCAAAACATGCCTGAATGCCAAGACATACTCTTGCA GAACTGCATGACGGGTGCAGTGACACTCTACGAGGTTGCAAAGGACCCTACGGAGAGCGT CGAGCCGGAGAAGATAAAACAAGAACANNNNNGCAGCAAAACGNTNNNCGTGGCNNNNNN NNCNGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6170#0      CTGGCACAGCTAATCCAAATCCTCCTCTTTTTCTTGTTTTTTTTTTTCTTTCTTCGTCTT 60
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      CTCCAACGCCCAAAGTAAAACAAAGGAAAAAAGAAAAGCCGCATCCAAGAACGCACCAGA 120
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AATTTCGGCGACGGTTGCGCGCGAATCCATCCATCCACCGGCGGTCGGAGGGCGGCGGCG 180
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      GCGGAGCAATTCCGCCCAACCAAGCGGCGGAGTCGGTGCGGGCGAAATTTCCGGGTTGGT 240
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      GCGCGGGGCTTGGGTTGGTGGTGGTGGACTGGTGGTGGTGTGTGTTCTTGGGAGTGGATC 300
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      TGGCAGGAGGCTGGCGATGGGGAGGCGGGAGTAGGGGGAGCGGCGGATTGGAGTGGGAGG 360
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      CGCGGTGTTGGGGGCTCCCATGGGCGGATGCTTCTCGCTGGAGGAGCACCGGCTCCAGGG 420
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      CAAGACAGAAGCTGGTGGGCCAGATGGGTTAAGGAAATGCAAATCTGATTCTAAAGCTAC 480
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AGCAAGTGTCCTTGCCCCTCCAAAAGATGTGGAGGACCTGCAAATCGAAGGATACGGAAA 540
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      TGTTAATATTTTCACATATAATGAACTAAGAGCAGCCACAAAAAACTTCCGGCCTGACCA 600
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AATTCTTGGAGAGGGTGGGTTTGGTGTTGTTTACAAAGGTGTAATTGATGAAAATGTTAG 660
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AGCGGGCTTTCCATCCACACAAGTTGCTGTGAAAGAATTAAACCCAGAGGGATTTCAGGG 720
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      TGACAAGGAATGGTTGGCAGAAGTCAACTACCTTGGGCAACTTAGCCATCCAAATCTAGT 780
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      CGAACTGATTGGGTATTGCTGTGAAGGCTCTCATAGACTGCTTGTTTACGAGTACATGGC 840
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      TTGCGGCAGCCTTGAAAAGCATCTTTTTCGCCGGGTTTGCCTTAATATGCCATGGTCTAC 900
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      TCGAATGAAGATTGCTCTAGGTGCTGCAAGGGGGCTGGAATATCTTCACGGAGCTGAGAG 960
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      ATCAATTATATATCGAGATTTCAAAACATCAAACATCTTGTTAGATGCGGATTATAATGC 1020
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      CAAGCTGTCAGACTTTGGCCTAGCACGAACTGGACCTAGTGGAGACCAAACCCATGTATC 1080
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AACTCGGGTCATGGGTACTTATGGCTATGCAGCTCCTGAATATGTCATGACAGGCCATCT 1140
consensus_6170#1      ------------------------CTATGCAGCTCCTGAATATGTCATGACAGGCCATCT 36
                                              ************************************

consensus_6170#0      GACAGCACGAAGTGGTGTCTATGGCTTTGGTGTCGTCCTTCTCGAGATGATCATAGGCAG 1200
consensus_6170#1      GACAGCACGAAGTGATGTCTATGGCTTTGGTGTCGTCCTTCTCGAGATGATCATAGGCAG 96
                      ************** *********************************************

consensus_6170#0      GAGGGCTGTGGACAAGAGCCGGCCTAGCCGTGAGCACAACCTAGTTGAGTGGGCACGTCC 1260
consensus_6170#1      GAGGGCTGTGGACAAGAGCCGGCCTAGCCGTGAGCACAACCTAGTTGAGTGGGCACGTCC 156
                      ************************************************************

consensus_6170#0      CCTCCTCGTGCACAATCGGAAGCTGTTCAGGATTATCGATCCAAGAATGGAAGGGCAGTA 1320
consensus_6170#1      CCTCCTCGTGCACAATCGGAAGCTGTTCAGGATTATCGATCCAAGAATGGAAGGGCAGTA 216
                      ************************************************************

consensus_6170#0      CTCCACCAAGGCTGCCATTGAGGTGGCAGGCCTTGCGTACCGATGCTTGAGCCAGAATCC 1380
consensus_6170#1      CTCCACCAAGGCTGCCATTGAGGTGGCAGGCCTTGCGTACCGATGCTTGAGCCAGAATCC 276
                      ************************************************************

consensus_6170#0      CAAAGGACGACCCACCATGAGCCAGGTTGTTGAGACCTTTGAGGCTGTGCAAAACATGCC 1440
consensus_6170#1      CAAAGGACGACCCACCATGAGCCAGGTTGTTGAGACCTTTGAGGCTGTGCAAAACATGCC 336
                      ************************************************************

consensus_6170#0      TGAATGCCAAGACATACTCTTGCAGAACTGCATGACGGGTGCAGTGACACTCTACGAGGT 1500
consensus_6170#1      TGAATGCCAAGACATACTCTTGCAGAACTGCATGACGGGTGCAGTGACACTCTACGAGGT 396
                      ************************************************************

consensus_6170#0      TGCAAAGGACCCTACGGAGAGCGTCGAGCCGGAGAAGATAAAACAAGAACAACCAGCAGC 1560
consensus_6170#1      TGCAAAGGACCCTACGGAGAGCGTCGAGCCGGAGAAGATAAAACAAGAACANNNNNGCAG 456
                      ***************************************************         

consensus_6170#0      AAAAACGGTCACCGTGGCACCGGCACCGGTAAATGGAAAACCCGTGCCTCAGAGCAGGAG 1620
consensus_6170#1      CAAAACGNTNNNCGTGGCNNNNNNNNCNGT------------------------------ 486
                       ****** *   ******        * **                              

consensus_6170#0      AACACGGCCAGGGAATGGCCGGAGCAAGAGCGAGCCGTCTTTGGAATGCAAGCTGTACAT 1680
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      CCCATCTCCAGACTCTGATGGCCAGCAGCCAGGCCTGGAGGCATTGTCATCCCCTTCCAG 1740
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AGATGGAAGCATAAAGGATCCACCGGACGAGGATTTGTACAAGATATAAAAGTCACACAG 1800
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AAGTTTTTTATGACGATTCAAGTTTTCGCTACCGGCGATTTCGCATTGCCATCCATCCAT 1860
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      CTTGTTGTCAAGATCGATCAGAGTCAAAGTTGGTGTTAAAATTTTTTCTGATGGCGGAAG 1920
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AACTCTACCTCGTTAGGTTTCTTGCTGTTCCGACTAGCAATTGTATGTAGAGAGGAGCGT 1980
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      TGTGGAAAGCATTTGTAATGTGAGATGCCTGCCGCGACGAAAAGTTCGTGTTGTAAACTT 2040
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      GAAACCATTCTCTGGGAAGAGGAAGATCCACATCATAATCGATGTGTCAGTGTTGTTGTT 2100
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      GCTCGAGTGTTTTTGACTTTTCTGTATAGATGATGATGTCCTTGCAAACTTGGTACAGTT 2160
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      CTACAGGAAATCAACAAGAAGATGGAAAAATATAAGATGAATCAGTGTCCGTTTGTTGAC 2220
consensus_6170#1      ------------------------------------------------------------
                                                                                  

consensus_6170#0      AGTTTGTTTTTGGAGTATGGTTTTGT 2246
consensus_6170#1      --------------------------
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)