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Oryza sativa
cluster # 6176 cluster # 6176       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6176#0 length = 2106 sequences # 3  
consensus_6176#1 length = 1171 sequences # 1  

consensusID : consensus_6176#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2106
fasta sequence
                              [TCCTACACCGGGGCGGAAGGGCAGGAAACCTCTCCCCTCCCACGCGCCGCCGACCGAAGCCGCCGCCGCCGCCGCCACCGGCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGCAGACGCCATGGAGGCCGAGGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCCGGAGGAGGAGGAGCACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGCCTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAACGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCTCGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCCTGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTCGGAGCGCGCGTGGCTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAAAGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGGACAATCTTCACGAACAGCTGCTGTGAAAGCTGTCTCCAATGTTATCGAACATATATGGCCTCAATGCAAGGTGGAGGTCTTCGGATCTTTTAGAACAGGGCTGTTTTTACCAACAAGTGATATCGATGTTGTAATATTTGACTCCAGGGTTAAGACTCCACAAGTTGGCCTGTATGCTCTTGCAAAAGCATTGTCTCAGAAAGGGGTTGCTAAAAAGATACAGGTAATAGCAAAGGCCCGTGTGCCAATTGTGAAGTTCGTGGAGAGAAAAAGTGAAATAGCTTTTGACATAAGTTTTGACATGGATGGTGGACCACAAGCAGCAGACTTCATCAAGGATTATGTGAAGAAGTTTCCTGCTTTAAGACATCTGTGTATGATTCTGAAAGTTTTTTTACACCAAAGAGAGCTTAATGAGGTCTATACGGGTGGAATTGGTTCATATGCTCTTCTCACTATGCTCATCACACATTTACAGTTGATCTGGGGAGGCAAAGATATACTGGGGTATCGTAAAAAGGAGCACAATTTGGGGATTCTTTTGATCGCATTATTTGATTTTTATGGACGCAAGTTGAACAATTGGGATGTTGGAATATCCTGCAATTCTGCTAGGACCTTTTTCTTGAAGACTGATAAAAACTTTGCAAATCCTGATCGAGCATACCTTCTAGCTATTCAAGATCCTATGGTACCAGATAATGATATTGGGAAGAACTCATTTAACTATTTCAAGGTGAAATCAGCATTTTCAAAGGCTTATTCTGTGTTAACCGATGCGAACTTGATAACAAGCTTGGGGCCCAATAGGAGCATTCTGGGTACCATTGTCAGACCAGACTCCGTGCTCCTAGACCGGAAAGGCTGGAACAAGGACGCTACAATACCTGACATGTTAACAGAACCCTGGGAACCATTACCCCGTCAGTTTGATAGCGATAATGATGCAGTCTATAATTGGCATGTGATAGATGATGAACCACTGCCCAGGAATACTCGATCCTCATCGGAGGACACAAGGCCATCACCTACACAAAAAAGGAAGTCTTCCAAACCAAAACAGAGATCGCGGAAAAAGGCCAAGGCTGATTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGACAGATTTACAAATACCCTCCCACAATATACTCAGCACATTAGTAGGTGGTGACTTTAGGCTGTTACTGATAGCATTTACAGTACAGTTCGGGATTGGGAGATCCCACGAGGTTTTGACAGGCAGAATGGCGCCTTGGCAGACGTCGAAGTTCAAGCAGCTTTCTGTAGCCATATGTATGATTTATTATTTATTTGTTTGTCTAAGGTTATTCGGTCCTTTGTAACGCCGATGAAACCGATATATTCAGTTATATTATCATCGTATGAACTGCAATTTCGCCAACTTGTCTATGG]

[+] EMBL AK121375             [TCCTACACCGGGGCGGAAGGGCAGGAAACCTCTCCCCTCCCACGCGCCGCCGACCGAAGCCGCCGCCGCCGCCGCCACCGGCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGCAGACGCCATGGAGGCCGAGGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCCGGAGGAGGAGGAGCACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGCCTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAACGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCTCGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCCTGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTCGGAGCGCGCGTGGCTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAAAGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGGACAATCTTCACGAACAGCTGCTGTGAAAGCTGTCTCCAATGTTATCGAACATATATGGCCTCAATGCAAGGTGGAGGTCTTCGGATCTTTTAGAACAGGGCTGTTTTTACCAACAAGTGATATCGATGTTGTAATATTTGACTCCAGGGTTAAGACTCCACAAGTTGGCCTGTATGCTCTTGCAAAAGCATTGTCTCAGAAAGGGGTTGCTAAAAAGATACAGGTAATAGCAAAGGCCCGTGTGCCAATTGTGAAGTTCGTGGAGAGAAAAAGTGAAATAGCTTTTGACATAAGTTTTGACATGGATGGTGGACCACAAGCAGCAGACTTCATCAAGGATTATGTGAAGAAGTTTCCTGCTTTAAGACATCTGTGTATGATTCTGAAAGTTTTTTTACACCAAAGAGAGCTTAATGAGGTCTATACGGGTGGAATTGGTTCATATGCTCTTCTCACTATGCTCATCACACATTTACAGTTGATCTGGGGAGGCAAAGATATACTGGGGTATCGTAAAAAGGAGCACAATTTGGGGATTCTTTTGATCGCATTATTTGATTTTTATGGACGCAAGTTGAACAATTGGGATGTTGGAATATCCTGCAATTCTGCTAGGACCTTTTTCTTGAAGACTGATAAAAACTTTGCAAATCCTGATCGAGCATACCTTCTAGCTATTCAAGATCCTATGGTACCAGATAATGATATTGGGAAGAACTCATTTAACTATTTCAAGGTGAAATCAGCATTTTCAAAGGCTTATTCTGTGTTAACCGATGCGAACTTGATAACAAGCTTGGGGCCCAATAGGAGCATTCTGGGTACCATTGTCAGACCAGACTCCGTGCTCCTAGACCGGAAAGGCTGGAACAAGGACGCTACAATACCTGACATGTTAACAGAACCCTGGGAACCATTACCCCGTCAGTTTGATAGCGATAATGATGCAGTCTATAATTGGCATGTGATAGATGATGAACCACTGCCCAGGAATACTCGATCCTCATCGGAGGACACAAGGCCATCACCTACACAAAAAAGGAAGTCTTCCAAACCAAAACAGAGATCGCGGAAAAAGGCCAAGGCTGATTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGACAGATTTACAAATACCCTCCCACAATATACTCAGCACATTAGTAGGTGGTGACTTTAGGCTGTTACTGATAGCATTTACAGTACAGTTCGGGATTGGGAGATCCCACGAGGTTTTGACAGGCAGAATGGCGCCTTGGCAGACGTCGAAGTTCAAGCAGCTTTCTGTAGCCATATGTATGATTTATTATTTATTTGTTTGTCTAAGGTTATTCGGTCCTTTGTAACGCCGATGAAACCGATATATTCAGTTATATTATCATCGTATGAACT                        ]
[+] EMBL CB634760             [                                                                     CGCCGCCACCGCCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGCAGACGCCATGGAGGCCGAAGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCCGGAGGAGGAGGAGTACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGCCTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAACGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCTCGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCCTGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTCGGAGCGCGCGTGGTTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAAAGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGAACAATCTTCACGAACAGCTGCTGTGAAAGCTGTCTCCAATGTTATCAAACATATATGGCCTCAATGCAAGGTGGAGGTCTTCGGATCTTTTAGAACAGGGCTGTTTTTACCAACAAGTGATATCGATGTTGTAATATTTGACTCCAGGGTTAAGACTCCACAAGTTGGCCTGTATGCTCTTGCAAAAGCATTGTCTCAGAAAGGGGTTGCTAAAAAGATACAGGTAATAGCAAAGGCCCGTGTGCCCATTGTGAAGTTCGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB634761             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCTATTCAAGATCNTATGGTACCAGATAATGATATTGGGAAGAACTCATTTAACTATTTCAAGGTGAAATCAGCATTTTCAAAGGCTTATTCTGTGTTAACCGATGCGAACTTGATAACAAGCTTGGGGCCCAATAGGAGCATTCTGGGTACCATTGTCAGACCAGACTCCGTGCTCCTAGACCGGAAAGGCTGGAACAAGGACGCTACAATACCTGACATGTTAACAGAACCCTGGGAACCATTACCCCGTCAGTTTGATAGCGATAATGATGCAGTCTATAATTGGCATGTGATAGATGATGAACCACTGCCCAGGAATACTCGATCCTCATCGGAGGACACAAGTCCATCACCTACACAAAAAAGGAAGTCTTCCAAACCAAAACAGAGATCGCGGAAAAAGGCCAAGGCTGATTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGACAGATTTACAAATACCCTCCCACAGTATACTCAGCACATTAGTAGGTGGTGACTTTAGGCTGTTACTGATAGCATTTACAGTACAGTTCGGGATTGGGAGATCCCACGAGGTTTTGACAGGCAGAATGGCGCCTTGGCAGACGTCGAAGTTCAAGCAGCTTTCTGTAGCCATATGTATGATTTATTATTTATTTGTTTGTCTAAGGTTATTCGGTCCTTTGTAACGCCGATGAAACTGATATATTCAGTTATATTATCATCGTATGAACTGCAATTTCGCCAACTTGTCTATGG]


>consensus_6176#0 TCCTACACCGGGGCGGAAGGGCAGGAAACCTCTCCCCTCCCACGCGCCGCCGACCGAAGC CGCCGCCGCCGCCGCCACCGGCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGC AGACGCCATGGAGGCCGAGGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCT GACACTGGCGTTCTCGCCGGAGGAGGAGGAGCACCTAGAGGGTGCGACTGCCGACCTAGG CGGCGCGTCGACCTCCGCCTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGC CTACTCCGTGTTCCGCAACGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGC GGCGGATTTCTTCTCCCTCGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCG TGCGTTGTCGCCGCAGCCTGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGA GCAGCCAGCGCAGGGGTCGGAGCGCGCGTGGCTTCGGGGAGGGAGGCGGTTCAGGAGCCC TATGCTGCAGCTTCACAAAGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGA AGGACAATCTTCACGAACAGCTGCTGTGAAAGCTGTCTCCAATGTTATCGAACATATATG GCCTCAATGCAAGGTGGAGGTCTTCGGATCTTTTAGAACAGGGCTGTTTTTACCAACAAG TGATATCGATGTTGTAATATTTGACTCCAGGGTTAAGACTCCACAAGTTGGCCTGTATGC TCTTGCAAAAGCATTGTCTCAGAAAGGGGTTGCTAAAAAGATACAGGTAATAGCAAAGGC CCGTGTGCCAATTGTGAAGTTCGTGGAGAGAAAAAGTGAAATAGCTTTTGACATAAGTTT TGACATGGATGGTGGACCACAAGCAGCAGACTTCATCAAGGATTATGTGAAGAAGTTTCC TGCTTTAAGACATCTGTGTATGATTCTGAAAGTTTTTTTACACCAAAGAGAGCTTAATGA GGTCTATACGGGTGGAATTGGTTCATATGCTCTTCTCACTATGCTCATCACACATTTACA GTTGATCTGGGGAGGCAAAGATATACTGGGGTATCGTAAAAAGGAGCACAATTTGGGGAT TCTTTTGATCGCATTATTTGATTTTTATGGACGCAAGTTGAACAATTGGGATGTTGGAAT ATCCTGCAATTCTGCTAGGACCTTTTTCTTGAAGACTGATAAAAACTTTGCAAATCCTGA TCGAGCATACCTTCTAGCTATTCAAGATCCTATGGTACCAGATAATGATATTGGGAAGAA CTCATTTAACTATTTCAAGGTGAAATCAGCATTTTCAAAGGCTTATTCTGTGTTAACCGA TGCGAACTTGATAACAAGCTTGGGGCCCAATAGGAGCATTCTGGGTACCATTGTCAGACC AGACTCCGTGCTCCTAGACCGGAAAGGCTGGAACAAGGACGCTACAATACCTGACATGTT AACAGAACCCTGGGAACCATTACCCCGTCAGTTTGATAGCGATAATGATGCAGTCTATAA TTGGCATGTGATAGATGATGAACCACTGCCCAGGAATACTCGATCCTCATCGGAGGACAC AAGGCCATCACCTACACAAAAAAGGAAGTCTTCCAAACCAAAACAGAGATCGCGGAAAAA GGCCAAGGCTGATTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGG ATTAGCACAATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCC GAGAGAGTATGACAGATTTACAAATACCCTCCCACAATATACTCAGCACATTAGTAGGTG GTGACTTTAGGCTGTTACTGATAGCATTTACAGTACAGTTCGGGATTGGGAGATCCCACG AGGTTTTGACAGGCAGAATGGCGCCTTGGCAGACGTCGAAGTTCAAGCAGCTTTCTGTAG CCATATGTATGATTTATTATTTATTTGTTTGTCTAAGGTTATTCGGTCCTTTGTAACGCC GATGAAACCGATATATTCAGTTATATTATCATCGTATGAACTGCAATTTCGCCAACTTGT CTATGG



consensusID : consensus_6176#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1171
fasta sequence
                              [TGTACCCCTTCGTCTCGGCCCGCCGCCGCCTCCTCCGCTCGAGCCGCACCGCGCAGCCGCCGGCCCAAACCCTATGGCTCGCAAAGCGCGACCCGCGGAGCCTCCTACACCGGGGCGGAAGGGCAGGAAACCTCTCCCCTCCCACGCGCCGCCGACCGAAGCCGCCGCCGCCGCCGCCACCGCCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGCAGACGCCATGGAGGCCGAAGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCCGGAGGAGGAGGAGCACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGCCTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAACGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCTCGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCCTGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTCGGAGCGCGCGTGGTTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAAAGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGAACAATCTTCACGAACAGCTGCTGTGAAAGCTGTCTCCAATGTTATCAAACATATATGGCCTCAATGCAAGGCTGATTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGACAGATTTACAAATACCCTCCCACAATATACTCAGCACATTAGTAGGTGGTGACTTTAGGCTGTTACTGATAGCATTTACAGTACAGTTCGGGATTGGGAGATCCCACGAGGTTTTGACAGGCAGAATGGCGCCTTGGCAGACGTCGAAGTTCAAGCAGCTTTCTGTAGCCATATGTATGATTTATTATTTATTTGTTTGTCTAAGGTTATTCGGTCCTTTGTAACGCCGATGAAACCGATATATTCAGTTATATTATCATCGTATGAACTG]

[+] EMBL AK105406             [TGTACCCCTTCGTCTCGGCCCGCCGCCGCCTCCTCCGCTCGAGCCGCACCGCGCAGCCGCCGGCCCAAACCCTATGGCTCGCAAAGCGCGACCCGCGGAGCCTCCTACACCGGGGCGGAAGGGCAGGAAACCTCTCCCCTCCCACGCGCCGCCGACCGAAGCCGCCGCCGCCGCCGCCACCGCCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGCAGACGCCATGGAGGCCGAAGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCCGGAGGAGGAGGAGCACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGCCTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAACGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCTCGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCCTGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTCGGAGCGCGCGTGGTTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAAAGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGAACAATCTTCACGAACAGCTGCTGTGAAAGCTGTCTCCAATGTTATCAAACATATATGGCCTCAATGCAAGGCTGATTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGACAGATTTACAAATACCCTCCCACAATATACTCAGCACATTAGTAGGTGGTGACTTTAGGCTGTTACTGATAGCATTTACAGTACAGTTCGGGATTGGGAGATCCCACGAGGTTTTGACAGGCAGAATGGCGCCTTGGCAGACGTCGAAGTTCAAGCAGCTTTCTGTAGCCATATGTATGATTTATTATTTATTTGTTTGTCTAAGGTTATTCGGTCCTTTGTAACGCCGATGAAACCGATATATTCAGTTATATTATCATCGTATGAACTG]


>consensus_6176#1 TGTACCCCTTCGTCTCGGCCCGCCGCCGCCTCCTCCGCTCGAGCCGCACCGCGCAGCCGC CGGCCCAAACCCTATGGCTCGCAAAGCGCGACCCGCGGAGCCTCCTACACCGGGGCGGAA GGGCAGGAAACCTCTCCCCTCCCACGCGCCGCCGACCGAAGCCGCCGCCGCCGCCGCCAC CGCCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGCAGACGCCATGGAGGCCGA AGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCC GGAGGAGGAGGAGCACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGC CTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAA CGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCT CGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCC TGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTC GGAGCGCGCGTGGTTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAA AGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGAACAATCTTCACGAAC AGCTGCTGTGAAAGCTGTCTCCAATGTTATCAAACATATATGGCCTCAATGCAAGGCTGA TTCTTCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATG TGATAGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGA CAGATTTACAAATACCCTCCCACAATATACTCAGCACATTAGTAGGTGGTGACTTTAGGC TGTTACTGATAGCATTTACAGTACAGTTCGGGATTGGGAGATCCCACGAGGTTTTGACAG GCAGAATGGCGCCTTGGCAGACGTCGAAGTTCAAGCAGCTTTCTGTAGCCATATGTATGA TTTATTATTTATTTGTTTGTCTAAGGTTATTCGGTCCTTTGTAACGCCGATGAAACCGAT ATATTCAGTTATATTATCATCGTATGAACTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6176#0      ------------------------------------------------------------
consensus_6176#1      TGTACCCCTTCGTCTCGGCCCGCCGCCGCCTCCTCCGCTCGAGCCGCACCGCGCAGCCGC 60
                                                                                  

consensus_6176#0      ------------------------------------------TCCTACACCGGGGCGGAA 18
consensus_6176#1      CGGCCCAAACCCTATGGCTCGCAAAGCGCGACCCGCGGAGCCTCCTACACCGGGGCGGAA 120
                                                                ******************

consensus_6176#0      GGGCAGGAAACCTCTCCCCTCCCACGCGCCGCCGACCGAAGCCGCCGCCGCCGCCGCCAC 78
consensus_6176#1      GGGCAGGAAACCTCTCCCCTCCCACGCGCCGCCGACCGAAGCCGCCGCCGCCGCCGCCAC 180
                      ************************************************************

consensus_6176#0      CGGCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGCAGACGCCATGGAGGCCGA 138
consensus_6176#1      CGCCGCCGCCTCTCCAGCCGCAGCCACCGCCTCTCCAGCCGCAGACGCCATGGAGGCCGA 240
                      ** *********************************************************

consensus_6176#0      GGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCC 198
consensus_6176#1      AGCGGGCGGCGTGGCCATCGTGTACGACGCGCTCCCGGGGCTGACACTGGCGTTCTCGCC 300
                       ***********************************************************

consensus_6176#0      GGAGGAGGAGGAGCACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGC 258
consensus_6176#1      GGAGGAGGAGGAGCACCTAGAGGGTGCGACTGCCGACCTAGGCGGCGCGTCGACCTCCGC 360
                      ************************************************************

consensus_6176#0      CTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAA 318
consensus_6176#1      CTCGGCTGCGGTGGTGGAGGAGGTGGAGGACGCCACCGCGGCCTACTCCGTGTTCCGCAA 420
                      ************************************************************

consensus_6176#0      CGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCT 378
consensus_6176#1      CGAGATCACGGCGGCTGGGGACGCGCTCGTCGATATCCCCGCGGCGGATTTCTTCTCCCT 480
                      ************************************************************

consensus_6176#0      CGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCC 438
consensus_6176#1      CGACGTGTCGGCGGCAGTTGAAGACGAGCCGGCCACCCCGCGTGCGTTGTCGCCGCAGCC 540
                      ************************************************************

consensus_6176#0      TGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTC 498
consensus_6176#1      TGCTCCGGAGGCGACGCTATCGGGTTCTCTAGCTCCCGCTGAGCAGCCAGCGCAGGGGTC 600
                      ************************************************************

consensus_6176#0      GGAGCGCGCGTGGCTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAA 558
consensus_6176#1      GGAGCGCGCGTGGTTTCGGGGAGGGAGGCGGTTCAGGAGCCCTATGCTGCAGCTTCACAA 660
                      ************* **********************************************

consensus_6176#0      AGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGGACAATCTTCACGAAC 618
consensus_6176#1      AGAGATTCTTGACTTCTGTGACTTTATATCACCTTCTGCTGAAGAACAATCTTCACGAAC 720
                      ******************************************** ***************

consensus_6176#0      AGCTGCTGTGAAAGCTGTCTCCAATGTTATCGAACATATATGGCCTCAATGCAAGGTGGA 678
consensus_6176#1      AGCTGCTGTGAAAGCTGTCTCCAATGTTATCAAACATATATGGCCTCAATGCAAGGCTGA 780
                      ******************************* ************************  **

consensus_6176#0      GGTCTTCGGATCTTTTAGAACAGGGCTGTTTTTACCAACAAGTGATATCGATGTTGTAAT 738
consensus_6176#1      T-TCTTCGAGTGGT----AACAATGCTGA----------AAATGGTTTCAA-GCGGGGGA 824
                        ******  *  *    ****  ****           ** ** * ** * *  *    

consensus_6176#0      ATTTGACTCCAGGGTTAAGACTCCACAAGTTGGCCTGTATGCTCTTGCAA-AAGCATT-G 796
consensus_6176#1      A---------AGGATTAGCACA--ATGTGATAGATCGCATCAAAGTGCAGGAAGCAGCAG 873
                      *         *** ***  **   *   * * *   * **     ****  *****   *

consensus_6176#0      TCTCAGAAAGGGGTTGCTAAAAAGATACAGGTAATAGCAAAGGCCCGTGTGCCAATTGTG 856
consensus_6176#1      ACGGAGCAAAGGGCCGAGAGAGTATGACAGAT--TTACAAATACCCTCCCACAATATACT 931
                       *  ** ** ***  *  * *     **** *  *  ****  ***     * *  *   

consensus_6176#0      AAGTTCGTGGAGAGAAAAAGTGAAATAGCTTTTGACATAAGTTTTGACATGGATGGTGGA 916
consensus_6176#1      CAGCACATTAGTAGGTGGTGACTTTAGGCTGTTACTGATAGCATTTACA-GTACAGT--- 987
                       **  * *    **     *       *** **      **  ** *** * *  **   

consensus_6176#0      CCACAAGCAGCAGACTTCATCAAGGATTATGTGAAGAAGTTTCCTGCTTTAAGACATCTG 976
consensus_6176#1      TCGGGATTGGGAGATCCCACGA--GGTTTTGACAGGCAGAATGGCGCCTT--GGCAGACG 1043
                       *   *   * ***   **  *  * ** **  * * **  *   ** **  * **   *

consensus_6176#0      TGTATGATTCTGAAAGTTTTTTTACACCAAAGAGAGCTTAATGAGGTCTATACGGGTGGA 1036
consensus_6176#1      TCGAAGTTCAAGCAGCTTTCTGTAGCCATATGTATGATTTATTATTTATTTGTTTGTCTA 1103
                      *  * * *   * *  *** * **  *  * *   * ** ** *  * * *    **  *

consensus_6176#0      ATTGGTTCATATGCTCTTCTCACTATGCTCATCACACATTTACAGTTGATCTGGGGAGGC 1096
consensus_6176#1      A---GGTTATTCGGTCCT-TTGTAACGCCGATGAAACCGATATATTCAGTTATATTATCA 1159
                      *   * * **  * ** * *    * **  ** * **   ** * *   *      *   

consensus_6176#0      AAAGATATACTGGGGTATCGTAAAAAGGAGCACAATTTGGGGATTCTTTTGATCGCATTA 1156
consensus_6176#1      TCGTATGAACTG------------------------------------------------ 1171
                          **  ****                                                

consensus_6176#0      TTTGATTTTTATGGACGCAAGTTGAACAATTGGGATGTTGGAATATCCTGCAATTCTGCT 1216
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      AGGACCTTTTTCTTGAAGACTGATAAAAACTTTGCAAATCCTGATCGAGCATACCTTCTA 1276
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      GCTATTCAAGATCCTATGGTACCAGATAATGATATTGGGAAGAACTCATTTAACTATTTC 1336
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      AAGGTGAAATCAGCATTTTCAAAGGCTTATTCTGTGTTAACCGATGCGAACTTGATAACA 1396
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      AGCTTGGGGCCCAATAGGAGCATTCTGGGTACCATTGTCAGACCAGACTCCGTGCTCCTA 1456
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      GACCGGAAAGGCTGGAACAAGGACGCTACAATACCTGACATGTTAACAGAACCCTGGGAA 1516
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      CCATTACCCCGTCAGTTTGATAGCGATAATGATGCAGTCTATAATTGGCATGTGATAGAT 1576
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      GATGAACCACTGCCCAGGAATACTCGATCCTCATCGGAGGACACAAGGCCATCACCTACA 1636
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      CAAAAAAGGAAGTCTTCCAAACCAAAACAGAGATCGCGGAAAAAGGCCAAGGCTGATTCT 1696
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      TCGAGTGGTAACAATGCTGAAAATGGTTTCAAGCGGGGGAAAGGATTAGCACAATGTGAT 1756
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      AGATCGCATCAAAGTGCAGGAAGCAGCAGACGGAGCAAAGGGCCGAGAGAGTATGACAGA 1816
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      TTTACAAATACCCTCCCACAATATACTCAGCACATTAGTAGGTGGTGACTTTAGGCTGTT 1876
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      ACTGATAGCATTTACAGTACAGTTCGGGATTGGGAGATCCCACGAGGTTTTGACAGGCAG 1936
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      AATGGCGCCTTGGCAGACGTCGAAGTTCAAGCAGCTTTCTGTAGCCATATGTATGATTTA 1996
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      TTATTTATTTGTTTGTCTAAGGTTATTCGGTCCTTTGTAACGCCGATGAAACCGATATAT 2056
consensus_6176#1      ------------------------------------------------------------
                                                                                  

consensus_6176#0      TCAGTTATATTATCATCGTATGAACTGCAATTTCGCCAACTTGTCTATGG 2106
consensus_6176#1      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)