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Oryza sativa
cluster # 6183 cluster # 6183       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6183#0 length = 939 sequences # 4  

consensusID : consensus_6183#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 939
fasta sequence
                              [ACGAAGCGAGAGGAGACCAAGATGTGCCAGCGGGGAATGGAGCAGCGATGCGCCGGCGGGGAACGAGCGGCGGCGGCGCGACACCACGTGAGGTCGGCGGCGGGAGGAGGCGGAGCAGCGGCGTGACCTCGGTGCCGCCACGCGGTGCCTGGAGGTGGCGCTGGCCCCGCTGCCCGCCGCGTCGCTCCTCCCGCTCACCGAGGCCCGGGTGCGGCTGCGTCTCGCGGCCCTGCTGCTGCGTTCCCGCTCCAAGGGCTTGCCACCACCAAGTCCCACCTCGAGCGTGCCTTGCTGCTCCCCTCCTCCCAGAGCTCTGGCGTGGATATCCGGCGGGCGGAGCGATGGATCCAGCGACGACGGAGCAGCTTCAGGGCGGCCAGATCCAGCCGAGCGGCGATGGAGCGGGGCGGAGCAGCGGTGAGGGCGCCGGGCGAAGCAGCGGTGAGGGCACTGAGCGGAGCAGCTGCGGGCGATGGCGGCTCGCCGGATCTCCTTCTCTCTTCAGCTCGCCTGCGCCAAATCCCTCTCCCCTCTCCTCGTCGGCGCCTGCTGTTCTGGGCAACGAC-AACTAGCAGCGGGGTTGCGGTTGTGCGGATGCCTGACGAATCCTGGCTATTCCCTGACGAAGAACGTGTGTCCCATTTTGGCTCCCCGTTCCTCGCTTGGTCACGGTAGCGTCTGACATGGAGGGGAATCTTGGCTGAGGCTGGGTGAGGCTGAATACCACCTATGCGCACTGTGAACGCCCTGAGTCACCGGCAGCAGGAGCCTCCAACCCAATGTTGGCTTTCCTTTTTGTTTGTGATGAAGTAGTAGTATATGGATGTACTGTCAACCTTGTACTAATATTTTCGCTGCAGCTTTTGTTAAAGCAAAAGCCAAGATTTTCCCATTATCGAAAAATAAAGCAGCCTCCAAACCCTGTACGGGCAACGGACT]

[+] EMBL CB645205             [ACGAAGCGAGAGGAGACCAAGATGTGCCAGCGGGGAATGGAGCAGCGATGCGCCGGCGGGGAACGAGCGGCGGCGGCGCGACACCACGTGAGGTCGGCGGCGGGAGGAGGCGGAGCAGCGGCGTGACCTCGGTGCCGCCACGCGGTGCCTGGAGGTGGCGCTGGCCCCGCTGCCCGCCGCGTCGCTCCTCCCGCTCACCGAGGCCCGGGTGCGGCTGCGTCTCGCGGCCCTGCTGCTGCGTTCCCGCTCCAAGGGCTTGCCACCACCAAGTCCCACCTCGAGCGTGCCTTGCTGCTCCCCTCCTCCCAGAGCTCTGGCGTGGATATCCGGCGGGCGGAGCGATGGATCCAGCGACGACGGAGCAGCTTCAGGGCGGCCAGATCCAGCCGAGCGGCGATGGAGCGGGGCGGAGCAGCGGTGAGGGCGCCGGGCGAAGCAGCGGTGAGGGCACTGAGCGGAGCAGCTGCGGGCGATGGCGGCTCGCCGGATCTCCTTCTCTCTTCAGCTCGCCTGCGCCAAATCCCTCTCCCCTCTCCTCGTCGGCGCCTGCTGTTCTGGGCAACGAC AACTAGCAGCGGGGTTGCGGTTGTGCGGATGCCTGACGAATCCTGGCTATTCCCTGACGAAGAACGTGTGTCCCATTTTGGCTCCCCGTTCCTCGCTTGGTCACGGTAGCGTCTGACATGGAGGGGAATCTTGGCTGAGGCTGGGTGAGGCTGAATACCACCTATGCGCACTGTGAACGCCCTGAGTCACCGGCAGCAGGAGCCTCCAACCCAATGTTGGCTTTCCTTTTTGTTTGTGATGAAGTAGTAGTATATGGATGTACTGTCAAC                                                                                                       ]
[+] EMBL CA755818             [          AGGAGACCAAGATGTGCCAGCGGGGAATGGAGCAGCGATGCGCCGGCGGGGAACGAGCGGCGGCGGCGCGACACCACGTGAGGTCGGCGGCGGGAGGAGGCGGAGCAGCGGCGTGACCTCGGTGCCGCCACGCGGTGCCTGGAGGTGGCGCTGGCCCCGCTGCCCGCCGCGTCGCTCCTCCCGCTCACCGAGGCCCGGGTGCGGCTGCGTCTCGCGGCCCTGCTGCTGCGTTCCCGCTCCAAGGGCTTGCCACCACCAAGTCCCACCTCGAGCGTGCCTTGCTGCTCCCCTCCTCCCAGAGCTCTGGCGTGGATATCCGGCGGGCGGAGCGATGGATCCAGCGACGACGGAGCAGCTTCAGGGCGGCCAGATCCAGCCGAGCGGCGATGGAGCGGGGCGGAGCAGCGGTGAGGGCGCCGGGCGAAGCAGCGGTGAGGGCACTGAGCGGAGCAGCTGCGGGCGATGGCGGCTCGCCGGATCTCCTTCTCTCTTCAGCTCGCCTGCGCCAAATCCCTCTCCCCTCTCCTCGTCGGNGCCTGCTGTTCTGGGCAACGACNNACTAGCA CGGGGTTGCGGTTGTGCGGATGCCTGACGAATCCTGGC                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK063076             [                                                       GCGGGGAACGAGCGGCGGCGGCGCGACACCACGTGAGGTCGGCGGCGGGAGGAGGCGGAGCAGCGGCGTGACCTCGGTGCCGCCACGCGGTGCCTGGAGGTGGCGCTGGCCCCGCTGCCCGCCGCGTCGCTCCTCCCGCTCACCGAGGCCCGGGTGCGGCTGCGTCTCGCGGCCCTGCTGCTGCGTTCCCGCTCCAAGGGCTTGCCACCACCAAGTCCCACCTCGAGCGTGCCTTGCTGCTCCCCTCCTCCCAGAGCTCTGGCGTGGATATCCGGCGGGCGGAGCGATGGATCCAGCGACGACGGAGCAGCTTCAGGGCGGCCAGATCCAGCCGAGCGGCGATGGAGCGGGGCGGAGCAGCGGTGAGGGCGCCGGGCGAAGCAGCGGTGAGGGCACTGAGCGGAGCAGCTGCGGGCGATGGCGGCTCGCCGGATCTCCTTCTCTCTTCAGCTCGCCTGCGCCAAATCCCTCTCCCCTCTCCTCGTCGGCGCCTGCTGTTCTGGGCAACGAC AACTAGCAGCGGGGTTGCGGTTGTGCGGATGCCTGACGAATCCTGGCTATTCCCTGACGAAGAACGTGTGTCCCATTTTGGCTCCCCGTTCCTCGCTTGGTCACGGTAGCGTCTGACATGGAGGGGAATCTTGGCTGAGGCTGGGTGAGGCTGAATACCACCTATGCGCACTGTGAACGCCCTGAGTCACCGGCAGCAGGAGCCTCCAACCCAATGTTGGCTTTCCTTTTTGTTTGTGATGAAGTAGTAGTATATGGATGTACTGTCAACCTTGTACTAATATTTTCGCTGCAGCTTTTGTTAAAGCAAAAGCCAAGATTTT                                                   ]
[-] EMBL CB645206             [                                                                                                                                                                                                             CGGGTGCGGCTGCGTCTCGCGGCCCTGCTGCTGCGTTCCCGCTCCAAGGGCTTGCCACCACCAAGTCCCACCTCGAGCGTGCCTTGCTGCTCCCCTCCTCCCAGAGCTCTGGCGTGGATATCCGGCGGGCGGAGCGATGGATCCAGCGACGACGGAGCAGCTTCAGGGCGGCCAGATCCAGCCGAGCGGCGATGGAGCGGGGCGGAGCAGCGGTGAGGGCGCCGGGCGAAGCAGCGGTGAGGGCACTGAGCGGAGCAGCTGCGGGCGATGGCGGCTCGCCGGATCTCCTTCTCTCTTCAGCTCGCCTGCGCCAAATCCCTCTCCCCTCTCCTCGTCGGCGCCTGCTGTTCTGGGCAACGAC AACTAGCAGCGGGGTTGCGGTTGTGCGGATGCCTGACGAATCCTGGCTATTCCCTGACGAAGAACGTGTGTCCCATTTTGGCTCCCCGTTCCTCGCTTGGTCACGGTAGCGTCTGACATGGAGGGGAATCTTGGCTGAGGCTGGGTGAGGCTGAATACCACCTATGCGCACTGTGAACGCCCTGAGTCACCGGCAGCAGGAGCCTCCAACCCAATGTTGGCTTTCCTTTTTGTTTGTGATGAAGTAGTAGTATATGGATGTACTGTCAACCTTGTACTAATATTTTCGCTGCAGCTTTTGTTAAAGCAAAAGCCAAGATTTTCCCATTATCGAAAAATAAAGCAGCCTCCAAACCCTGTACGGGCAACGGACT]


>consensus_6183#0 ACGAAGCGAGAGGAGACCAAGATGTGCCAGCGGGGAATGGAGCAGCGATGCGCCGGCGGG GAACGAGCGGCGGCGGCGCGACACCACGTGAGGTCGGCGGCGGGAGGAGGCGGAGCAGCG GCGTGACCTCGGTGCCGCCACGCGGTGCCTGGAGGTGGCGCTGGCCCCGCTGCCCGCCGC GTCGCTCCTCCCGCTCACCGAGGCCCGGGTGCGGCTGCGTCTCGCGGCCCTGCTGCTGCG TTCCCGCTCCAAGGGCTTGCCACCACCAAGTCCCACCTCGAGCGTGCCTTGCTGCTCCCC TCCTCCCAGAGCTCTGGCGTGGATATCCGGCGGGCGGAGCGATGGATCCAGCGACGACGG AGCAGCTTCAGGGCGGCCAGATCCAGCCGAGCGGCGATGGAGCGGGGCGGAGCAGCGGTG AGGGCGCCGGGCGAAGCAGCGGTGAGGGCACTGAGCGGAGCAGCTGCGGGCGATGGCGGC TCGCCGGATCTCCTTCTCTCTTCAGCTCGCCTGCGCCAAATCCCTCTCCCCTCTCCTCGT CGGCGCCTGCTGTTCTGGGCAACGACAACTAGCAGCGGGGTTGCGGTTGTGCGGATGCCT GACGAATCCTGGCTATTCCCTGACGAAGAACGTGTGTCCCATTTTGGCTCCCCGTTCCTC GCTTGGTCACGGTAGCGTCTGACATGGAGGGGAATCTTGGCTGAGGCTGGGTGAGGCTGA ATACCACCTATGCGCACTGTGAACGCCCTGAGTCACCGGCAGCAGGAGCCTCCAACCCAA TGTTGGCTTTCCTTTTTGTTTGTGATGAAGTAGTAGTATATGGATGTACTGTCAACCTTG TACTAATATTTTCGCTGCAGCTTTTGTTAAAGCAAAAGCCAAGATTTTCCCATTATCGAA AAATAAAGCAGCCTCCAAACCCTGTACGGGCAACGGACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)