These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6186#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2036 fasta sequence [ATGGTGCTGACACAGATAAGGAATGCAAAGAGCAAGCTCGTGATTCAGCGGTTTCCACTAAAGAAGCTGGATGCCGTGAGTGTGATGGTTCCCTACATGATGGTTGTGAAGCAGGACAAGTAGATCCACTGGAGACGGAAGCAGTGGAGACCTCTGAATGCGGAGATCTTGGTGAAGAAGCGAGCGAGTACGGTGACTGCAGAGAGGATGAAGAGAAGATTGAGCCAGAGGAAGCACCAATTGTTCGGAAGGACTCAGTTTTGGAGGTAGCTTTGTCAGGAGAAGCTACAGGGAGGGATATCCAATTGCCGTTGCTGGAGATGGTGGAGACTGTGGCGGAAGCTCAGGAAGAAGTTTCTGTTCCAGGACCTGAGAAAGAGGAGCAAGAGATGAAGGGCAGGAGGTCAAGCAATTGCTGCTCCCCATCGACAGCACTGAAGGAGGACAGGAAACTGCGACGGTTGAGCAGCCGCAGACGGGTAGGTAGCAGTAGTAGGGCCTCATCGGGCAGTGACAGGGTTGGGCGGCGGCACAGCTTCTCAGCCGAGACAGAAGCACGTCGGTCAAGCTTCTCGAGCTTGAAGGACTCAAGGAGAGCTAGTTTCTCCATCGACAGGGATGGCCGCAGATGGAGCTTCTCTATTGAGCAGGAACATCTTGTTGCAGAGCCTAAGGTGCTGATGGGATCCAGAAAGGGCCAGAAAATTTCATCTGAGCCAGAGTCGGAAAAAGATTGCGCTGTTCATGCTGCCCCAAACAGTGCAGAGGAAACTCTTGAATCTCATGACGACGGAAAGGAAGAAGCAACATTGGATGGACAGGAAGAAGGAACAACACAAGAGACACAAGTTGATGAGAAGGGTGAGAAGGTAGAAGTCGGAGGTGTTGAGGCACAAGATGTGGTCGAAGAACAGAAGCAGAGAAGAAAGAAAAGTGGTGAATTGCCAGATTGCCTCCTCTTGATGATGTATGAGCCTAAGCTCTCTATGGAGGTCTCCAAGGAGACATGGGTCTGCAGCACGGACTTCGTCCACTGGAAGTCTTACCAGGGCCAGAACCGCCGCAACCGCCGCCAACAAAAGGCTGGTTGCAATGCCGCTCCAGCGGAGGAGCTCAAGGATACAGACAATGCTGAAGGAACCAGTGATGCTAAGAACACAGAAGAGAGTGTAGCGCCTGCATCAGCAAACTTGGTGTCTATGCCACCTCCGGTTGTGCAGAAATCACCACTCAAAGAAGCTGCGGAGCAGAAGTTCAAGATAGAGCTGCCACTGGTTACTGGCGCTGCAACATATGCACCGTTTGTTCTGAAGCGCTGCAAATCCGAGCCGATGCGATCCTCGGCACGGCTGGCGCCCGATGCCTGCTTCTGGAAGGACCGGCATAGGCCCCTCAATGCCACCGGAGTTGGCTTTTGATTCCAGCCGAACACAACCTCTGGTATGCCTAGTTAGCTAACGAGTGAGTTGAGAGTTTTCAAGCTTTGTCGTGTAATAGTGATGAAGTTCTTTCATGCTTGGTGCTGTTATGTGATGTGGACAAACAAATAATAGCATGTTAAGTTACATCAGATAGATTAGGGAGGAGTATATGTAAATCTCTTGGGGTTGCTTCATGTGTGTGCTAAATTCCTTTTTTCGTTGATGATCATGATGTTGTGCAGTGCAGCTATAGTTCTTTCTTTCCCCCCATCAACATCTGCTTGTTTTTGCCACATGTTAGGTCTTCCTTCAACATTCAGCTTCATCATTCCTTCATTTCCTTGCAAATAAGTTATTGATCCACACTGGCAAGNTGGTAGGNTCACATGGCTTGATTTATAAAAAATGCCATCCAGTCAAACCTTTAGTAGCATTGGTGATCCATTACATATTGCACAATTAGATACTTATNCCAATTGGGCTGGGAAACTGGGAATGGNGTCGCATCGTCGNTCAATTTCATTTCACCTTTATTNTGNCATGACACACACTGGCTTGCCGNTTGGGGGTTTTTCCCGTTCCTTGCTTGGTCGNGNTATTTNNAACCGCTTGNAA] [+] EMBL AK121496 [ATGGTGCTGACACAGATAAGGAATGCAAAGAGCAAGCTCGTGATTCAGCGGTTTCCACTAAAGAAGCTGGATGCCGTGAGTGTGATGGTTCCCTACATGATGGTTGTGAAGCAGGACAAGTAGATCCACTGGAGACGGAAGCAGTGGAGACCTCTGAATGCGGAGATCTTGGTGAAGAAGCGAGCGAGTACGGTGACTGCAGAGAGGATGAAGAGAAGATTGAGCCAGAGGAAGCACCAATTGTTCGGAAGGACTCAGTTTTGGAGGTAGCTTTGTCAGGAGAAGCTACAGGGAGGGATATCCAATTGCCGTTGCTGGAGATGGTGGAGACTGTGGCGGAAGCTCAGGAAGAAGTTTCTGTTCCAGGACCTGAGAAAGAGGAGCAAGAGATGAAGGGCAGGAGGTCAAGCAATTGCTGCTCCCCATCGACAGCACTGAAGGAGGACAGGAAACTGCGACGGTTGAGCAGCCGCAGACGGGTAGGTAGCAGTAGTAGGGCCTCATCGGGCAGTGACAGGGTTGGGCGGCGGCACAGCTTCTCAGCCGAGACAGAAGCACGTCGGTCAAGCTTCTCGAGCTTGAAGGACTCAAGGAGAGCTAGTTTCTCCATCGACAGGGATGGCCGCAGATGGAGCTTCTCTATTGAGCAGGAACATCTTGTTGCAGAGCCTAAGGTGCTGATGGGATCCAGAAAGGGCCAGAAAATTTCATCTGAGCCAGAGTCGGAAAAAGATTGCGCTGTTCATGCTGCCCCAAACAGTGCAGAGGAAACTCTTGAATCTCATGACGACGGAAAGGAAGAAGCAACATTGGATGGACAGGAAGAAGGAACAACACAAGAGACACAAGTTGATGAGAAGGGTGAGAAGGTAGAAGTCGGAGGTGTTGAGGCACAAGATGTGGTCGAAGAACAGAAGCAGAGAAGAAAGAAAAGTGGTGAATTGCCAGATTGCCTCCTCTTGATGATGTATGAGCCTAAGCTCTCTATGGAGGTCTCCAAGGAGACATGGGTCTGCAGCACGGACTTCGTCCACTGGAAGTCTTACCAGGGCCAGAACCGCCGCAACCGCCGCCAACAAAAGGCTGGTTGCAATGCCGCTCCAGCGGAGGAGCTCAAGGATACAGACAATGCTGAAGGAACCAGTGATGCTAAGAACACAGAAGAGAGTGTAGCGCCTGCATCAGCAAACTTGGTGTCTATGCCACCTCCGGTTGTGCAGAAATCACCACTCAAAGAAGCTGCGGAGCAGAAGTTCAAGATAGAGCTGCCACTGGTTACTGGCGCTGCAACATATGCACCGTTTGTTCTGAAGCGCTGCAAATCCGAGCCGATGCGATCCTCGGCACGGCTGGCGCCCGATGCCTGCTTCTGGAAGGACCGGCATAGGCCCCTCAATGCCACCGGAGTTGGCTTTTGATTCCAGCCGAACACAACCTCTGGTATGCCTAGTTAGCTAACGAGTGAGTTGAGAGTTTTCAAGCTTTGTCGTGTAATAGTGATGAAGTTCTTTCATGCTTGGTGCTGTTATGTGATGTGGACAAACAAATAATAGCATGTTAAGTTACATCAGATAGATTAGGGAGGAGTATATGTAAATCTCTTGGGGTTGCTTCATGTGTGTGCTAAATTCCTTTTTTC ] [+] EMBL AK060651 [ CTTTGTCAGGAGAAGCTACAGGGAGGGATATCCAATTGCCGTTGCTGGAGATGGTGGAGACTGTGGCGGAAGCTCAGGAAGAAGTTTCTGTTCCAGGACCTGAGGAAGAGGAGCAAGAGATGAAGGGCAGGAGGTCAAGCAATTGCTGCTCCCCATCGACAGCACTGAAGGAGGACAGGAAACTGCGACGGTTGAGCAGCCGCAGACGGGTAGGTAGCAGTAGTAGGGCCTCATCGGGCAGTGACAGGGTTGGGCGGCGGCACAGCTTCTCAGCCGAGACAGAAGCACGTCGGTCAAGCTTCTCGAGCTTGAAGGACTCAAGGAGAGCTAGTTTCTCCATCGACAGGGATGGCCGCAGATGGAGCTTCTCTATTGAGCAGGAACATCTTGTTGCAGAGCCTAAGGTGCTGATGGGATCCAGAAAGGGCCAGAAAATTTCATCTGAGCCAGAGTCGGAAAAAGATTGCGCTGTTCATGCTGCCCCAAACAGTGCAGAGGAAACTCTTGAATCTCATGACGACGGAAAGGAAGAAGCAACATTGGATGGACAGGAAGAAGGAACAACACAAGAGACACAAGTTGATGAGAAGGGTGAGAAGGTAGAAGTCGGAGGTGTTGAGGCACAAGATGTGGTCGAAGAACAGAAGCAGAGAAGAAAGAAAAGTGGTGAATTGCCAGATTGCCTCCTCTTGATGATGTATGAGCCTAAGCTCTCTATGGAGGTCTCCAAGGAGACATGGGTCTGCAGCACGGACTTCGTCCACTGGAAGTCTTACCAGGGCCAGAACCGCCGCAACCGCCGCCAACAAAAGGCTGGTTGCAATGCCGCTCCAGCGGAGGAGCTCAAGGATACAGACAATGCTGAAGGAACCAGTGATGCTAAGAACACAGAAGAGAGTGTAGCGCCTGCATCAGCAAACTTGGTGTCTATGCCACCTCCGGTTGTGCAGAAATCACCACTCAAAGAAGCTGCGGAGCAGAAGTTCAAGATAGAGCTGCCACTGGTTACTGGCGCTGCAACATATGCACCGTTTGTTCTGAAGCGCTGCAAATCCGAGCCGATGCGATCCTCGGCACGGCTGGCGCCCGATGCCTGCTTCTGGAAGGACCGGCATAGGCCCCTCAATGCCACCGGAGTTGGCTTTTGATTCCAGCCGAACACAACCTCTGGTATGCCTAGTTAGCTAACGAGTGAGTTGAGAGTTTTCAAGCTTTGTCGTGTAATAGTGATGAAGTTCTTTCATGCTTGGTGCTGTTATGTGATGTGGACAAACAAATAATAGCATGTTAAGTTACATCAGATAGATTAGGGGGGAGTATATGTAAATC ] [+] EMBL CA766375 [ GAAGGAACAACACAAGAGACACAAGTTGATGAGAAGGGTGAGAAGGTAGAAGTCGGAGGTGTTGAGGCACAAGATGTGGTCGAAGAACAGAAGCAGAGAAGAAAGAAAAGTGGTGAATTGCCAGATTGCCTCCTCT TGATGTATGAGCCTAAGCTCTCTATGGAGGTCTCCAAGGAGACATGGGTCTGCNNNACGGACTTCGTCCACTGGAAGTCTTACCAGGGCCAGAACNGGCGCAACCGCCGCCCNCAAAAGGCTGGTTGCAATGCCGCTCCAGCGGAGGAGCTCAAGGATACAGACAATGNNAAAGGAACCAGTGATGCTAAGAACACAGAAGAGAGTGTAGCGCCTGCATCAGCAAACTTGGTGTCTATGCCACCTCCGGTTGTGCAGAAATCACCACTCAAAGAAGCTGCCGAGCAGAAGTTCAAGATAGAGCTGCCACTAGTTACTGGCGCTGCAACATATGCACCGTTTGTTCTGAAGCACTGCAAATCCGAGCCGATGCGATCCTCGGCACGGCTGGCGCCCGATGCCTGCTTCTGGAAGGACCGGCATAGGCCCCTCAATGCCACCGGAGTTGGCTTTTGATTCCAGCCGAACACAACCTCTGGTATGCCTAGTTAGCT ] [+] EMBL CB096423 [ caaggggGAACACAGAAGAGAGTGTAGCGCCTGCATCAGCAAACTTGGTGTCTATGCCACCTCCGGTTGTGCAGAAATCACCACTCAAAGAAGCTGCCGAGCAGAAGTTCAAGATAGAGCTGCCACTAGTTACTGGCGCTGCAACATATGCACCGTTTGTTCTGAAGCGCTGCAAATCCGAGCCGATGCGATCCTCGGCACGGCTGGCGCCCGATGCCCGCTTCTGGAAGGACCGGCATAGGCCCCTCAATGCCACCGGAGTTGGCTTTTGATTCCAGCCGAACACAACCTCTGGTATGCCTAGTTAGCTAACGAGTGAGTTGAGAGTTTTCAAGCTTTGTCGTGTAATAGTGATGAAGTTCTTTCATGCTTGGTGCTGTTATGTGATGTGGACAAACAAATAATAGCATGTTAAGTTACATCAGATAGATTAGGGAGGAGTATATGTAAGTCTCTTGGAGTTGCTTCATGTGTGTGCTAAATTCCTTTTTTCGTTGATGATCATGATGTTGTGCAGTGCAGCTATAGTTCTTTCTTTCCCCCCATCAACATCTGCTTGTTTTTGCCACATGTTAGGTCTTCCTTCAACATTCAGCTTCATCATTCCTTCATTTCCTTGCAAATAAGTTATTGATCCACACTGGCAAGNTGGTAGGNTCACATGGCTTGATTTATAAAAAATGCCATCCAGTCAAACCTTTAGTAGCATTGGTGATCCATTACATATTGCACAATTAGATACTTATNCCAATTGGGCTGGGAAACTGGGAATGGNGTCGCATCGTCGNTCAATTTCATTTCACCTTTATTNTGNCATGACACACACTGGCTTGCCGNTTGGGGGTTTTTCCCGTTCCTTGCTTGGTCGNGNTATTTNNAACCGCTTGNAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||